CsaV3_1G006490 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G006490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription factor
Location	chr1: 4146372 .. 4163900 (-)
RNA-Seq Expression	CsaV3_1G006490
Synteny	CsaV3_1G006490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACGCATAGATATTTTAGTAGGCCAACGAAAATATCAGGCGAAAGAGGCAAATTTAATCGAGGAATGTACTAATTCGGCGGTTTGGTGGAGCGACAATGGTGTGTTTCGTCTTTATTTTCTCTATCATGCTTAAATTTTGTAACCTTGCCAACTTTCGGAGTTTCGATGAGAGTTTCGCTGGTCTTGGATTCCGACTATTGCAGAGGCAATGAAGTTAGTTTACAAGTTCAGTCCATTTCCTTTGTCTAATTGAACGTCACGTTTCGTAACTCTATTTATTTCTTCGTACTAGAGACGTTTTCCTAATTCGAGTCAAGGGCATTTTTCCTTCTAATTGTTATTATTATTTTAATTTTTATAATTTTGATTATTATTTTAATTTTTCTAATTTTGATTATTATTTTAATTTTTACATAAAGATCAACCTGATTTCATTTTATTGTAAAGAAAATATACACAAACTTCTCAATTAAAAAATATTCAAGATTTATTCGACATAAATATAAGGATGAAGTTTGGAGTTGGACGTTTGATTGGAAGTTTGATGGAATGCATTGTACACTGGGGTGTTATAGAAAGTTTAATTAAAAGTTCCATGAAAGTCATGGAATGCAATGCATAATGGGGGTAAAAGAAATCGTACAAATACTGATAGAATATCAGTATAATATGGTGATTAGAAGGGATAAATTAGTAATTAGATAGTAAGTCATTAGAAAGGATATTATGTTAGTAATTAGATGTAAGTAGGGAAGACTTTTTGGTTACAAACGGTGAGTGAGAGTGAAGTTAGATGTGCGAAATTTTTATTGGATTTTTGTTCTTCTGAGAATTTGGGAGAACTAGTTATCTTGAAAAGTTAGCGATTACTTTGCTACTCCTCATATGATATTGTAACTTTAGATATTTCCATGAGAGATGCTTACTTTTGGGAAGATCATTGAGTGGGTGAGAGACCTCTTTTCGTTGTGTATCATCCTCGATTGTATTACTTCTCTCAACAGTCATTTTGTAGTCAATGTTTTGGTGTGGGTTGGGAGCTCTTGTTTTTTTCGTTTGGATTCTATAGCCCTCTTTTCTATTAGGAAGCAATGGATGTGGCTGCTTTTCTTTCTTTACTCGATAGGTTGGGGAAAATGGATGTTAGATTTTGGAGTCCCAATCATTTGAAAGTGTTATCGTGTAAGTCTCTTTGTGATTTAGCTGATCCTTCCCCTTAGGTCATTTGATCTTTTCGATGCTTTGGGGGATTAAGGTTCCTAGAAATATGAAATTCTTTGTTTGACAAGTTCTTTACAATCATGCTAACACGCTGGACAGGCTTGTCAAGAAGTTACCTTTGCTTGTTAGGATTTTTTTGTTGTATTCTTTGTTGAGAGGTGGAGGAAGACCTTAACCTATATTTTGGCGATGTGACTTAGTGATTGTTGTCTGGGATTTCTTTTGGAAGACGTTTGGCATGAATCGCATGATAACCGTTTGTGACAAAGATCTCAATACTATAATTTCTCCTCAATTTTCTTTCTGGGGAAAGACTGGTTTTTTGCCTAGCAGGAGAGTGTTGTCTTATAAGTTTTGCTAGTAAGCGGAACAGTAGGGTATTTAGGGGTGGTCTCTCGTTCATTTTCTTGTTTTTTTTTGTTTGTTTTGATTTTGGAAATCTCTTGTAACTATTCTATACACGTGATTTCACATAGTTAAAGTTCTTTGTTGTAATGTGAGTTCCTCCATTATTTTGTGGGCTTGGTTTCTTTTTAATGTTTGTGTTCTTTTCATTTTTTTCTTCAACGAAAGTCGTTATTTTTATGTATATTTCAAATTTCTGTGTATTTGAGTTTTTCTGTGTTCCTTGGTAGGTGGTATCCTAACATATGTTAAAGATGAGATGGATGTTTGAACATTTACCTAGTTTATCGATTCAGTCTCTTTTGCCTTTTATTTTCTATTTCTGTTGCATCAATCTGAATATTCTTCAACTCCTTAAACTCCTATAACTTATCTGTTAATGCGGCTGATTCAAGGGACTTGTTATTTATTTTTTAAATCAAGCTGAAATAGGGACTTATCTGAGTTTCTGGGGAAGCAATGTGGTTGTTTAATATGGAGCAAGACTGGCAGATGTTTTACAAGAATATATGACATGAGGTAGTTGGCCATTGTCCTTTTAAATATGGAATGATTGCGTTCTCAACTTTTTTGTGTTTATGTGGTATATAAAATGGCAAGTGTTCGAAATTTCTCCTCTTCTTTCCAACTTGGATGAAATGGTTGAATGATATTATGAAGATCAGTTCTACCTGGTTGGTATTGTGGTGGTCTAGTTGTCGTGTTGTGGTTGATGTGATAACTTTTGTTCATTTCTTGCTTTGAACTCCTTTTGCTTGGACATTTTTATTTTTTAACTACTGTTTATGCTATTGGTTTGCCATGATGGGTCTCTTGAATTTACTTTCACTTCTACTGGCACCGGTGCATTTTCCTTTTCTCAATCCATTAACTGTGAAACCCGAGTAACATATAATTTGGCCTGTGGGATTCTGTTTAGTCCTTGATTTTGGTTTTCTTGGTCAAAATTGTACGATAAAATCAATCACTTTTCAGTTCTATTTCTGAACACTGTCTCCTATCATCAACAGATTGATGACATGGTGTTCTAAAAGAGGGGGGACTTCTTTTATTTCCCTGTAGAGGGAGGGTGGAGAGATTAAAATGATAGGAATTCAAGTGAGAGATTGGAGAACGGGTAAAAGTCTATAATGATAAGATTTGTCTCTTTACTAGATAGAGTGCATGTGTCTGAGAGACCATTGTCCGTCATATATCTCTAGCCGATGTAAAACTTTATTCTCTTATCGGCATTTGATTCCACTTGAACATCTTGAATATTAACGGACTCATGGTTACGTAGATTTGCATGATCCAGGAACTAAGATCATTTATCATGAGCAATTACTTTTTAGGGTAGATTAAATACCCCTTTTCCGTTTTAAAGGTTTGAACTAGAAGTTTCCTTAGTTTCTAGTTTTGAAAAATATAGTAATTCAACTAGATAAGGATCTTCTAAATTGTTATTGGGAACGAACCGCTGTTGGCAGATTCGACGAAGGCTTTGATGTGTTTTTGAGTTTGGATACAGTTCTCTATGTTCCAACAATGATGAAATGGTGAAGGGATTGATTCACTATTTAATTTTGAGGTCGATTTATTTTTGTTCAAGCCACTTTTTTGTTCTTTTTTCTAGAGAAAATCCGAGGTTGACTGGGTTAAATTATAAAAATATATCTTTCTACTTTGTCCTTTGTTTCAAAAGCACTCATATTTTTTCGGAAGTTGCAATACCTTAATTCTTGACCTTACATTTAAATATTTCTAAATTAATTTGATATAGAAGTTTTTTAGAATGATGAGGGAAAACAGACGTAACGGGTGTGGCAGTGACCTAGAACAAATGTACTTTTTCTTCTTATTGAAAAACATTTATTGGAAAATAGAAAGACGACAAACATAAAAACATAAAACGGTGTTTTCTTTTTTTCTTTTTTTTTTGTTTGTTTTTTGTTTTCGTGCCTAATAGGTAGTATGCATTAACAATCATAGTGTGTCCTGAAGAACCATTCAGAAACAGGTTTGGTTTCTGAATTTAGTGATAAAAAGAACTCCAGCCCAAAATTTATGGGTTATCAACTTAATGAGTAATCTATCTATTCCTTTTTCTGAATAATTGAATGACTTGGATTTAAATTGTTGTCTTATATTTACATATATTGGTCTATTTATCTTTCTTATGACCTGTTATTAAAATGGAAATACTTAATCCCCTTCGGAAACATTAAGCCACTCTAGTGATAGATAACCACTTTACTTTTGTTGTCCTATTGTGACTGGACTTGGAGTGTACACAAACAATTGAGAAGTTTGTAGTTGGGGGTACCTTAAATATCCATGGTCCAGGTGAAATCTTAAAATAGCATAATGCCCATAACCGCTATTTCAAGATGTATATACAATTCTTGAATAAGCCTCAGTACTCTTGTTGTAATATTGCATGCCAAAAAAACCAAAGAACAGAAAGTTGGAGCATTGTACTTGTTCTTCATAAAAAAAAAAAAAGAAGTGTCTGAGACCAAACAAGGACAATCATAAAAATGGATTTCCGCTGAAAGTGTTCCTACTATTTTGAACAGAACAAGAAGATAGGAAAGTAACAGAGCGTAATGCATTTTGTGGGAAATGAAGGAACAAGTTTCTTCTTCCCAAGATGTAAACGTGGAGTCATTTTAACCATCTACTTTTTCACTAAGTTTTCACTTCATGTTGAAGGGAAATTAGTGTGTGTTTCTCATTAGGACAGAAAGTATGATGAGCATCAATGTTGTAGCAACTTCAACTTTAAGCTCTGATAAGTCTTTTTTGTATGTGGACCAAAAGCTTAGCTTCCAAATATGGACCAGGAAATTTCAGAGAAAGGGTGTGTTCAGGGTAATAACAAGCTTTTGTAGTTCAGCCACACTTTCTTATCTGAAGATAGGATTTTAAATCTTGCAATGGTTGGATGAGAAACCCTCAAAAGCCAAATGAAACTGTACAATTTTGATTTATGTTTTCAACTTTATCCTAAAGTTTCTGTATTTAGTAAAAGATTCATTATTTTTCTTTTTCTTACCAGGAATGAGCTGGATGAGCAAACCTCTCTGGCGGGCTTGCCTTGTTTTACATTTCCCCTTTCAATTCATGTCAGGTACGAAATCTCCTCCCCTCTCCACACGTTTTTCCCCACCTCATCAGCATCACATGAACTAAAATTGGAATTTTGCTTACTTTTCTTATCTGATTGACTCATCAACAAACACATAAACACAAAAGAGAAGTGAAGAAAAGTAGTCCACCGCTCCCTTTAATTCTGCTGACTCCATTTTTAGATATTTCAAGATGGGACTTAAAATGTGCAAAGCAGGCAATTGGGTTTAGGAAAGATGATTTACTTTAACGCCTCATATTGTAGTGTACAACGTGAGGCAGGGATTTCACCTCAGTAGTTTGTGATGGACCTACAGAAAAATATTGACATCTAATTTTACATGATCTAGGAAGCTTAGAGTTTCTATAACCATACATCTAAAACTAAGGTTGTCCTCCTTGTTAGACATTTCCCATGCCCATCCTTGTGAACTTCACGTGTATGTTTTGAATTTCACGTGTACAATGTCTTTAATATGGCTTTTCCCTTTTAAGTCAATTGACCCAATAATCTGGGGGCCCCCCCTCCACTCTTCCCTTTGTTAATTTGGGTTCTTCCTTTTTCCCTGTGGAATCTGTATTGGGAATATTTTGGCTTCCTCACCTACCTGACTAGAGAAAAAAAGGAAGAAAAAGCTGAGGAACTTTCTCTGTGATTGAATTTTTTAAAACTTTTGATGGGACCAAAAGCTCACTGATTAATCTAAGTTTAGATTATTTTATCGTCTGGTGGATTGTTATTTTTTTATTTTTAAGGTGGGACCCTTTCTCATTTGAAGCTTTGATAAGTTATGGCCTATGATTTTTGGATCTTGGGTTGGTCCAAGTATCAAGTATAAGCTGATCTCATCCATTCTTTCCCTTTAAGAACATTCAAAAAGAAGTTTTTCCTGCACTTTTCCATCACTTTCTTAGAGATTTTTGTTCCAATGAAAATGAATTTGAGTCATCTTAAAGAAGGATTGAGATTATGACGAGGCCCACAAAGAAGGGAATTGAAGAAGATATGAAGATTAGAAGTGGTTCTACAATAGAGAATTCTAAGACTAAATCATCATGTAAAGGAGCTACTGGATTTGTACAAGAAGGAAAAGGTAGGCTGTATATATTTGGTAGATGTGTTGCTATGCTTCTTTGTTGGCATGATTGAAGCAATTATTATTCGTATTTTGTAACGAGTTTCAGAATCCCCAATTCAACTATTTTTGTTCATTCTTTTTCTTTGTGTTTTGTTTTCTTTTCTTTTTCCACTCTATATATCTCTACACCAATGTGTACATTTTATTGTAATCTTTTATATGTGAATAGGTTTCTGATTACAATATGTCCTCGTTGAGGACGAGAGTTGGTCTTCATTACCAAGAAAAAACTTCATGTTATAGTCCCAACTATAATTGATATGATGAGAGAATGGTTGATTTATAGTCATGACTTTTGTTTAAGGTTCAAACGTTTGCTTTTTTATTAGTTAAAATTTTGAATTTCTCCATTGGAACCCGTAAGAAAATAATAATATTAAGTCGTTTTTTTTTTTTTTTGCTATTTTAAAGGGCTTTTTACACCTAAATAAAAGTCATACCATTGTCTAAATTTTGCTATATTTAAAATTAATACTATTATTTTACTTGACTTGTTTATTTTTTCATCTCATCATTTGGTTTCATCAAATATAATAATAACAATATCAAATGGCACACAGAAGTTTCTTATGAACTCTACTTTTAAGTCCTAAAAAACAAATGAAAATCAAGGAAGCGTGTGACGAGCATTTGTTCAAGACTTGCATATTGGATAATATATACTATGTGCATTTATAGTTGGTAAGTTTCTAAACACACGAAAAAGCATGTAACTTATTATGTTTATATTCAATAGATATATTCAACATTTCAACATAAAGATATGAAAGTAAACAAACAAAATCTTTGAAATGGATAACACATCAATTGAAATAGGTTTTATTAAATGGAAACCCACGAAAACAAAATCAAAATTCATTCGATCTCTTAATATTGAAATGATAGTAAAAATGTTAAATCGGTCCACAAATGAAGCTAGAAGCTTTTAGGAAAATAATTGAAATTTTATTTAAAAGAGGTTTTAGATCGTTTGCCCCCACGTTCTTGTTTGGGCCCAGAACCGAAAGGCCCAAACCTAAACTTCGGTTGGTTTTCTGGATGAGTGATCAATGGACGTCAGCTCTATCAACACTTCAATTTCATCTTTTCTGACGCAAAAAACAGTATTATGGTAAGTCGTTTAGATTATTGGCTAATTGTTATTTCAACGATCCTTAACAGTACTCTTCCAATAACACAATAATAATAACAATTATGATCATTCCCATGAGAGTGAAACTATATCAAAGTTTTAGCAACGCTTCCGGATTCGACCATTTTGGAATTCAATTCAATCTATTACATTCACTATTCATACCAATGTGTTTGGTTTTATCTTCTTTGGAACTTTTGATTTAGAATTTAGGATATAGAGTTTTGGATTGAACGTAATCAAAGGATGACTTTTAGTGATCGAGCCATTTTAAAAATATTTCCTACCTTCTTAGTTTAGATTGCTTTAAATATCTCCTCCTCTGATATAGATATCAATAAGCGTCCACAAAAGAAATGTGAAGTCTTTATATAGATCACAATGCACAGAAAGGTCTCATTATGACTAGAGTTATCAATGTGAATTTTCTAATTGATTCAGATCATATCCAAATTGGTGCTATAACTACCTATGACGTAGATCATGTATATGCGTATTCTCTAGATTTTGATATGTGCTTAGTTGAGATCCATATCACCTATTTGTTAAGTGGGAATTATGAAACATCCTGCTTATATTGCTTCACACACGTTTTATGAAAAGAATAATTGTAAGAAACAACACCATCTATGTTCTTAATCTTCAAAGATGAACACAAATCTTTCCACCCATCTTTTAAAAAATGTCTTTGACAACATCAAATTCTTAGTGCTCAAAACCTCACACTTGCTCTGATTTGGAAAGCTTTTCTCTGAGTTCTCTCCTTTCACCTCTCAATAACGAGGGTGACACCATCAATCTTTCCAATTTTCTTTTAATGTTGCAGATCGTCCTCATCTTTTTTCCTCTCTTTGGATTATGTTGTATTTGATCTTTCTTGCTTTTTCTGAGCCTTTTGCGCTTGCTGCTATCTTGTACTTTATTATTTCAGGTAATGATATTCTTCTTTTGGCTTTGTGGTATGGATGATGCTATAGAACCTAGTTGAGATATTCTGGTATATATATCTATTAATCCATTAGTTTCTTGTTAATTATCATGAAATTTTATCTCTCTGAGATGTGATACATTAACCCTCCTTTTCAATGAGTCAATTCTTATTTTTTTAGCTCTAAAGACTAAAACTGAGTTTATAGTTCAAACAATCAATGCAATACTCTTCCTTCATTTCCACAAACTTTCTCACAGTTGCCATTCCAAATAACAACAATAATTTTATATAGATAATGTCCATAATATTGAAACTACGAACATGATCAATCTCTTCCTCATAAAACTACTTTTCCTTTAGTAAAATTAATATTTATAAATAGTTGATTGACTAAGTTTCGTTTAACAATAAACATACTGCTTTCTTCTCTAGAGGGTGCACATATATATTTGTCTTAAATCATTATGTGTCAATAAACATATATAATCGTTAACGTTAGCAAATCTATTAAAAGTTATATAAAAATTAGAAGGAATATTTTATGATAAGATAAAGCCAGGATAATAAATGTGAATATGAATTCTTTTTCCCCCTCAATGAGAGACCTTTTGAAATTGTACTGTTGAAAAAACCATTATTAGATGGACATAATAAAAACCCACCCAGGCCCCTAGCTAAGGGCATCCCCTTATACTTTGACTCATCTTTCGCACGTGTAAAGTAAAACACATCAAAATCTGGTAACTTTTTTTTCTCTTCAAAAAATAACTTCAATTCCAATTATTTCACATCAAAACAATATAACTTTTAGACATAACATGAAGATCATCAATTCATTTAAAAGAAAAAACAATAGAAGTAAAGTTAAGTTAATGATCATCATTTAACAAATGAAATTCTAAGTTTATTTTCATATATATATTTCCATGAAATGATTTTGTTTAAAATAATAAAAGGTAAAAGGCAAACTATACTGACAAAAAAGAAGGGAAAAAAAGAAGGAAAAGAAATGAGCTTTGGTAGAGAGAGCTCATTCATTGAAATCATATTCAATGAACAGACAATAAAGGCAACTTAAACCTATCTCTCTTTTCTTTTTTTATATGTTTTCCTTTTATATTTTCCAAGTGATTAACAAAAAACAATCCAATATAATTGTCCTTTTTCCATAAAGTTTGGATTATACTAAAATGAAATATAATATATATGCATCATTTGTGGAAAATTTCATGTCTTTTCAACACCAAAAATGACCCCCCCTCACCCCCTCCTCCCAACCAAAAAGAATTAATAATAAAAAAAAGAGCTAGAAGTAAAATAAGATAGATATAAACAATTGAAAAACTGTCCCCTTAAACATATATAGGGTGACAGTGACATATCAGCAAAGCCAAAAGTATAGTAATGTATAATAAAGCCAAAATAAATGAATAAATGTTGAATGATATAGAAAGTTGAAGCAATGGGAAATTAATGGGAATGAGCACTGAGTATAGTAATGTAAGAAATAGATGTGAAGAGAGCACAGTAGAAAGAAAGAAAGAAAGGTCAATTGATACATATAAAGTAGACATTGTCACATGAGAACCCAAATTCAATAGTTTGGAGTTTGGAAAAAAAAACCATGGGTGGTGGAAATCTAGGTGTTGAGGGTTGTTTTAGTTGGATTGTGTATTTTATTAAAAATGTACCACAAATGTTTAGGTCAAAATATTATTTCGGTTTTCTACTTCTAAGTTTATCTGAATTTAGTTTTTACGATAGTTCTTTTTTTAAAAAAAAGTTGTTATTGTCACAGTGTTTTGACATCTTCCTTAATAAAAATTGAATTAAAGAAATTTTACGATTTTTAATAAGATAAATATGCTTAGACGATAGATGATCACTTACAAAGTTCTCGTATTGTACCTCTTATTATAAAATTTAAATATTTGAAGCATTAATTTGCTTTAAAATATTTAGGTTTTTTTTCACTAATATCCCATCTATCTTTCTAAATGGTACTAAATTATTTAATTGTAATTTTTCAATTTCTTTTTGTTTTTTCAATATCATTGGAATGAGATATCTTAATATTTATCGACAGAAAATATTATTTGAAGAGAAAGTCAAAATTTTCTGACAATGAACTAAGACATATGTTATTTCATTAGAAATGGAGTAAATAAAAATCATATATAAGAAATAAAAATAACAAAATAAAATCATGTGGATCTTAAATCTTCTTCAATTGGTCTGATATTTTTTTAGGCATACAAAAGGGTGAATTTACTCTAAATTCATACACAAACTTCTATAAAACCATACCCATCTTGTATTTGCTTTCACAAAATTATTTGGCTTGGTGATTTTAGTGAGTAATTTTATGTAATTTTTAGTTTAAGAAGATACATGTTTATCTTTTATTACTATATATATCCTTTTATATAGTATATAATATACTAACTTTCCTATAAACCATAAATTTATGAACTAAATAAAAAGTTTCAAATATATATCCAATGTTTGAAAGGATGTTTTTTTAAGTTAAAAATAAGGGACATTTTTTAAAATAATAAAATAAATTAAAATATTTACGAATTATAACAAAATTTTAGATTTTATAACTTATAGTCTTTTTATCACTATGGCATATCAATGACTATCAGTAATAGAATTTGCTATTGGTTATAAATATTTTGAAAAATCTACCATTTTAAAAAAATCTCTTAAAAATAAATCATAGCTAAATTTTGAAGACATTATTTTATAATAAAGTTTTTTGCATTACAACAAATGGCCTATTAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCAGGTTCGAGACCTGCATGGGCCAATATTTTTGTCAAAAAATTGGATGACTTTTCGAGCCTATTTTTTTCGGTGTGATGAAAGTACTATAGATATGTTAACCTACTTGAGCTTCTCCGATCAACTTTTACCCAACCTTTATCAATGAAGATATCCTAATGTTTATAGTTGATGTTTATATTATATATATAAATCAATTTATATTTTTTAGATGACCCCAACAACCTAACCTATTTTTATTTTCTTTTAAAACTTTATTAACAAACCTATATCCGAGTCTAGAGCACATAATAATCGAGGATATTATGGATATGTCAACCTAGCTAGTTGAGATACATTGATTCACCTTCTAATCCAATAATCCCCAATCGCATCAGACATATATACTTTTGACACACCCTCGAACATTTTTGGCATAGCCTCAAACATATTGATATAGTGATTAAAAAGTAAAAATGATTGGACTAACATAGTACTTTCTCATTCTGCAAGAATATTACATGTATAAGATGCTCAAGAGTAACACACACACACACAAGATTCTTAAAAAAACTGAATACAATAGTGTTTACCATATTATTCCTTATAGCTAGAATCAATGATGATTACAAATATTGAAATTGGCCATGGTTACAGAGTACTACACAATATACAAACCAATCGATCATAGGCAACAAAAAACTTATCATGGGTTTGAACAACAACATAATATATAATTGCTCTCACACACTAAAAAGCTGAGAACTAAACAGGGGGTTAAGAAAGTACATAAAATGTAATGATATTAGATGTTTAATTTCTAGGGTTACATCTGATATATATGTGTATGAATCTGATACCTTGATATAATTAAAACGTGCCCACTATCACACCAAATTTGTACATTATTCAGCTCTTGCCACCCTTATCTTTTTTAGCAGTTTATCCTTTAAGAAAGTAACCCCTTAGAAAAAAAAGAACACAACATAAAAAACAGCTAGCTTTGCATTATCAGCTTGTGTGGTCCTTTTATAATTATGACAGTACAAAGCAGTCAATTTCATCTCTAGCTTATTAGTACACACAAACAGAAAAATAAAATGAAAAAATAAGTGGGTGGGGAAAGGGGAGAGAGGACGGCATGTAAAAATGGAAAAATAGATTATTGTTTTTTTTTTTTTTAGTTTTAGAGGAAGCCATGGAAAAGAAGAGAGAGAGAGAGAGGGTTTTGATTGATGATAGGAATATTGCCATTCTACATATTTTTTTTTCTTTTTATGAAGAAAGATGAGATGGTTTTGTGTGGTTATGGTAGTTGGTGATTGGCTAGGGTTTCAGAAGGTCTTTGCATGAACAGTGCTCAAAGTACAAAGGAACTGTTTTTATGTTTATATATATTTTTATATATAACAAAATATCTGTTTGGTTACGATCGTTTTTGTTTAGCTTTCGTTTGGCCTTTAAATTTCAAAATGCTACACTTTTAGGTTTTGGATTTGATTATATAATGAATCTCTTTCAGGATGCATCGAATATGGTGAGAGTGGAGAAAAATTTTAAGTCTCAATCATATAATTATAATAATTAGAAATTTTTAGAATAATTATTAAGTACCTAACCATATTTTTAAAAAATTGCAAACATAGAAAAGTCTATCACACTCTTATGAATTATCGTCGGTTATAACCAATATTTGTATGGTCTATCATTGATAGTCTCTTATCATCGATAGATTTTGACAGATTTTGACAGATTTTGTTATATTTGTAATTTTTTAAAAATGTTGTTATATACTTAATTATTTTGAATCTAATTGTTATATTTACAATTATCTCATTCCTCTATTTTGCGTATTTTGTTATAAAAAATTGTTGCTAGGTTTAATTAGCTACAATTTTATATTTGAGTTTTGTTTTTTAAAACCAAAATTTTAAGTTTCAAAATTTAAACTTTCAATTAACCTTGATTTTATTACTAAATACTTATTTTAAGTGTTTGACATTCTGTTTTGTTTTTTGGAATTTGACCTTTTATTAATTGATTTTAAAATTTAAAATTATTAAAAAGCAAAATTTCAATTTTAATTTTAATTAAAGAAAATGGTCAAAAATAGAAAAAAATGACGAAATATTTACGATAAAAAATGACAAACTAATAAGGATGAAAAACATAGAAACTTAAATTTATTATAATTTTTAAATTTGTTTAAATTAATTATAGACATTAACACCAAAAACACAAAGTAATCAATGCATCACTTTGAGCATATGATATGATATGGGAGGATGTCATACATCCATATATCAACCTAGTCAAGATATTTAGGTATAGGTCTATTGATCCATCGATCTCTAGTATTATATTTTTTTAAAAAAATAGAGTATCTAGCAAAAAAAAAAAAAAAAATCAATGCAAAAAATATATAATTTGAAATTAAAACCTATAGATCAAATCGAAACAAAACTAAAATCAATCTCTTAAGGACATAAACTTGAAACATATATTATAAAATCGATAAGGAATGAATTAAAATAAAACTCAAAACTAAAGACTAAAAAGTAACACGCATACCCACAAATATATATCCAAACTAAGAGATGAAATAGAAACTAAACTCTAAATTAAACCTAGAAACCGAAAAAAAGAATATTTGCTTTCTTTTAATTTCTTGTCAATGAAAGAGAAAGAAAGGAGAAAAGAAAGAGATAAGCACGCATGGAGGGAAAGGCCAATAACAACAAGATTCTCTTCTCCTCCTATGGTGAATTTGATTGATGGACACATAAGGGTGAAGATGAGAGAGAGAGAGAAAAAAAAAAGAAGAAGGTGTTTCTCCTTTTTGTAGAAAGTGACATTGGCTAACCTCACATACACAAACACACACACACACACACAAAAACAGTCAAAAATAATGTACATATATATTCCCCCATTTTCATCTTCCCTTTCTCTCTACCACTAGCGTGCCCCTTTGAGTCAAATAATTGTCCTTTCACTTAAAAATCTTAGACATGGCCACGTGGATCTCTCGGTTCCCAACTTTATCCCACCGCACCCCATCATCATAACTAAATATATAAGTGAATCTATACTCATGAAATCATGGATTAGTTAACCCCAAAGTTCCCTTCAGTACTCTACTATGGATTCTTCAGTTTACTTACATAATATATGTATTTGTATATCACTTTAATTTGTGGTTGCTAGACGTACTATGATCCGTTTATAAGGTATAAAACTTCATTTAATTTATCAAATGGGTGTGTGTTTAAGTTCAATTTATTAGGCTTTGCATGTGGTTTATTTAAGTGATCTTTAAGTAGATGGATGGCTATACAAATCTAGGCTTTTTAGCTTTAGGCTATATATAATTTATAAATTCAAAGGTTATTTTCAAAGAGAGGAGATCTTTATTAGCTACCTAGAATCTTGCCTAGATCTTGTAGAGTGTGCTTACTTTTAAGTTAAAAAATTACCCTTAGTGGTTATATAAACAGAACTAGATGTAGGCTTCTCTTAATATTGAAGATGGTAACCATTCAGAAGTTAATAAAAAAATGAATTAATTGGAATCAAATTAAAGAACAATATCCAACTAACTGTTTTGTTGTTTTGGTTGACCATTCATTTATACCCAACAAGATTGGATATACGAACAAATTTAAAGACATAAATTTGATCTAAATGCGTAACTCAAATTGGTGATTAAAATCAATCTTAAACAACGTATCATTCTAACAAAATTAAACAAGTCACGTTGATTAAATTGATTGTAGGTTTTGTCAATTTAAACTACCACAAGTAGTAATGAATGTTAATAATTACTCAACCTAAACCCTAATCAAACCTAAAAGAAGTCACGGAAGGATTTTAAACAAGAAATTAGAGAAAAAGAAGGGATCAATGCATGCATGTACACCGAAACATCTTAAATATGTTGACATATTTTTAACATTCTCTTCACAACCGAGCATAAATAAGGTGTCCTCGTAATTGAGAGGATTTGAGAAGAAATATGTTTGGTGGGATAAAAAAAAAAAAAAAAAGCCTAATTTTTCTTTTGTTTATTATTATATAATTAAATAGCATGTATTTGTATTTTTTTTTTCAACAACCCCACTCACTACTCAACTCACATATAACTTCCCATAATATATATCACTCTAAAGATGCAAACTTTTAGCTCAAAAGGAAAGAGCTTTAGAAAGAGATGGATCCTTTTCCTTTGTCTTTCTTTACACATTAAATAAATTCAGCCTCCTCCTCTACATTTTCTGTCTTTCTTTACAAAACTCATCCATTCTTTTTTCTTTTTTGGTTCAAACTTCTAATTTTCTCTGTCTGTCTCTTTCTAATTCAGCTCCTTCCAGTCTATATACAGTAATCTCCACTGTGCTGTCTTTCTCAAACTCTACTTATAGCTTGTCCTTCAATTCCCCATTAAAAAAAAAGTGAATTTATTATATATTATCATTATTGTTGTAGTTGGTTTTATTTCACTCTCAACACCTCAAAAAATTACTGCAAAAAAAGAGAGGAATTTGAAAAGGATGTGAAGATTTCTTTTATTCATCTTCAAAGTTTTGCACTTGTCATCAAATTCAAGCCATTTCCATCATCAAATCTAGGTCTTTTTGTCCACAATTTTTCTCCCAAAAAAAAAAAAAAAAGGAACATGTTCTTCTCCACAAATAGTAGTGGTAATACCAAAAATGTCCATGACCCATTTGGTAATTTGTCTCATGATCTTGACCATTCATTCCATCTTCCCATCTCTTTCTTCCCCTTTCCTTCTCCTTTTGAAGTTGATGATGATCGTGATCTCAATTTCACTACTAATTCTCCCTCTAATTCTTCTCAAAATTATAATAATAATCCTCCTCCTATTATTTCCACTTGTAATAGCCCTCCTATTGACAACATGAGCATGGTGGTGATGAATTCAGATCAAAAGATGAAGAAGATGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCAAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTACCGGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTGTTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTACAGAGAAAAAAAACCATAATTGTTTCACGATCAGTAATTCTTCTTCTAATTATTCCAATTCTTCAGAGCTTGATAATGAAGTTGGAGTAATTATTGGTGATCAAAATTTGAATACCAAAGATAATAATATCAAAATTAGTAAGAAGAAGATCAAGAAGAAGAAGATTATGAGAGCCAAACAACTGCCAATTAGAAAAACCATGGCCAAAGAATTGAGAGAAAAGGCAAGAGAAAGAGCAAGAGCAAGAACTTTGGAGAAGCTGAAAAGTCAGATGTTTATTAGGGATTCAGCTTGTTGTTCAGATGATCATCAACCAAATTTTACCAACATTAATTCATCTTCTTCTTGGAGCAGTCCTTTTGAAACTACTGGTGGAGAGGAATCAGCTGGTACTACTACTCATCAAAGCTACAATAATAATAATAATCCAATCACTTCCCAGTTTGATTCTCAATTCCACCAAATTTTTTCTTCTTTTGATGTTATTTTGCCAAAGTGGAGCCCATCTGATGATTCAACTTTCAATTTTCTGCATCAACAGGTGAGTTTTGAAGTTAATTTACTATTATTTTTCCTCTTTAATCTTAATCAAACAGTCAAGTCTGAAAAAAATATGTATCTAGGACAAAAATGAAGTGCATGGATATAAATTTTATGATTCTGATCAAACCCATTCAACTTTTTTTTCTTTTTGTAGCATGAATTTGAAGACTCTGATATCTTTGGATAAAAGGTATATGGGTTGGTTGCAAGCATGCTACAAGTCTCAACAACATGGGATTTTGATTCTTAATTTTCTCAAGGGAATTAACCTAGCTAGGAAGTATATCAAGTTGGAAAGACAAATATTGTTATATTACCATTGTTATTATTCTCATAATTTCATGTCGAGTGTCTTGTTGTTGTTCTTCACTTTCTGTTTGAAATTAATGTAAAACATAGAAACATTTCTCAATATATTTGCATGTGCTTTCAATTAACAACACAAATTGTGCAAATTTTTTCTATAATTCTCTCTTCATGCACATGATCTTCTTGACTTTTGTAGATATTTCTTGAAGAACCTATGTTAAGAAGTTGATGTCTAATTAAGGAATAGAAAAGGCTTGAAAACATTTAGAGATTTAAATTTAAAACTCATTATATTATTGGAATTACTATTGTGTTTCTTCCTCTTTTTTTTCTTATCCATAATTCCTTTTATCCCAAAAGGATCATGTTTTTATTATTTCCCTCGAAAGTATATGCATGATGATGTTATAGTATGTGGATTACATTGAAGCCAGTAATGAGAGATTTAGAGGATACCTTTTAGGAAGTGATCGATGGAATAGACACAAGAGATAAATTTTCGCATTATCCACTTTCTCACAATGTGGATGATGCCAATCTTCTTAGAGTACTCTAATTAATGACACAAATTTTCGAAGAATGAATGATGGGTAATGTTTAACAATAAAAGTTCTTCCATTACCTTTTAAAACATATATAACCACTAAGTCATGTCATAGGCAATCAAATTTAGGGAAACATCAGTTCATAGTTTTCATAATTTTAGGAATAATTCATGTGTATTGTTCATTAGATCGAGATTCATGA

mRNA sequence

ATGGTACGCATAGATATTTTAGTAGGCCAACGAAAATATCAGGCGAAAGAGGCAAATTTAATCGAGGAATGTACTAATTCGGCGGTTTGGTGGAGCGACAATGGAATGAGCTGGATGAGCAAACCTCTCTGGCGGGCTTGCCTTGTTTTACATTTCCCCTTTCAATTCATGTCAGATGGACATAATAAAAACCCACCCAGGCCCCTAGCTAAGGGCATCCCCTTATACTTTGACTCATCTTTCGCACGTGTAAACCCTCCTATTGACAACATGAGCATGGTGGTGATGAATTCAGATCAAAAGATGAAGAAGATGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCAAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTACCGGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTGTTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTACAGAGAAAAAAAACCATAATTGTTTCACGATCAATCGAGATTCATGA

Coding sequence (CDS)

ATGGTACGCATAGATATTTTAGTAGGCCAACGAAAATATCAGGCGAAAGAGGCAAATTTAATCGAGGAATGTACTAATTCGGCGGTTTGGTGGAGCGACAATGGAATGAGCTGGATGAGCAAACCTCTCTGGCGGGCTTGCCTTGTTTTACATTTCCCCTTTCAATTCATGTCAGATGGACATAATAAAAACCCACCCAGGCCCCTAGCTAAGGGCATCCCCTTATACTTTGACTCATCTTTCGCACGTGTAAACCCTCCTATTGACAACATGAGCATGGTGGTGATGAATTCAGATCAAAAGATGAAGAAGATGATGAAGAAAGTCCCACAAAGAAAAAGATTGTCAAAAAAAGATAGACATAGCAAAATCACAACAGCAAAAGGGGTAAGAGATAGAAGAATGAGGCTTTCTTTACCGGTGGCTAAGCAATTCTTTGGATTACAAGACATGTTGGGTGTTGATAAAGGTAGCAAAACAGTTGAATGGTTGTTGATTCAAGCCAAGCCTGAAATTTTGAAACTTGCTACAGAGAAAAAAAACCATAATTGTTTCACGATCAATCGAGATTCATGA

Protein sequence

MVRIDILVGQRKYQAKEANLIEECTNSAVWWSDNGMSWMSKPLWRACLVLHFPFQFMSDGHNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNCFTINRDS*

Homology

[Close]

BLAST of CsaV3_1G006490 vs. NCBI nr
Match: KAE8652537.1 (hypothetical protein Csa_014315 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-105
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MVRIDILVGQRKYQAKEANLIEECTNSAVWWSDNGMSWMSKPLWRACLVLHFPFQFMSDG 60
           MVRIDILVGQRKYQAKEANLIEECTNSAVWWSDNGMSWMSKPLWRACLVLHFPFQFMSDG
Sbjct: 1   MVRIDILVGQRKYQAKEANLIEECTNSAVWWSDNGMSWMSKPLWRACLVLHFPFQFMSDG 60

Query: 61  HNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDR 120
           HNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDR
Sbjct: 61  HNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSKKDR 120

Query: 121 HSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKK 180
           HSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKK
Sbjct: 121 HSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKK 180

Query: 181 NHNCFTINRDS 192
           NHNCFTINRDS
Sbjct: 181 NHNCFTINRDS 191

[Close]

BLAST of CsaV3_1G006490 vs. NCBI nr
Match: XP_011650456.1 (transcription factor TCP18 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 4.7e-49
Identity = 109/134 (81.34%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 58  SDGHNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK 117
           S  +N NPP       P+    +    +PPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK
Sbjct: 61  SQNYNNNPP-------PIISTCN----SPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK 120

Query: 118 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT 177
           KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT
Sbjct: 121 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT 180

Query: 178 EKKNHNCFTINRDS 192
           EKKNHNCFTI+  S
Sbjct: 181 EKKNHNCFTISNSS 183

[Close]

BLAST of CsaV3_1G006490 vs. NCBI nr
Match: XP_038895175.1 (transcription factor TCP18-like [Benincasa hispida])

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-30
Identity = 81/118 (68.64%), Postives = 91/118 (77.12%), Query Frame = 0


Query: 79  SSFARVNPPIDNMSMVVMNSDQ-----KMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDR 138
           SS   +NPPI + +    + D+       +K MKK+P RKRLSKKDRHSKITTA+GVRDR
Sbjct: 65  SSSQNINPPIISTNNNTPSLDKILPTISAQKKMKKIPPRKRLSKKDRHSKITTARGVRDR 124

Query: 139 RMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNCFTINRDS 192
           RMRLSLPVAKQFFGLQD+LGVDKGSKTVEWLLIQAKPEILKLA E KNH   + N  S
Sbjct: 125 RMRLSLPVAKQFFGLQDLLGVDKGSKTVEWLLIQAKPEILKLARE-KNHFLMSNNSSS 181

[Close]

BLAST of CsaV3_1G006490 vs. NCBI nr
Match: XP_023000972.1 (transcription factor TCP18-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-25
Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N +M + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 61  NNNMGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 120

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 121 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 147

[Close]

BLAST of CsaV3_1G006490 vs. NCBI nr
Match: KAG6584372.1 (Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019957.1 Transcription factor TCP18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.9 bits (315), Expect = 3.6e-25
Identity = 70/95 (73.68%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N  M + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 63  NKKMGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 122

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 123 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 149

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot
Match: A1YKT1 (Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-25
Identity = 70/144 (48.61%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 58  SDGHNKNPPRPLAKGIP-LYFDSSFARVNPP---------IDNMSMVVMNSDQKMKKMMK 117
           ++GH+ N   P     P L+F  +   V  P         I++   +  + D KMKK   
Sbjct: 86  NNGHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKK--- 145

Query: 118 KVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQ 177
                K+ S+ DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL Q
Sbjct: 146 ----AKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQ 205

Query: 178 AKPEILKLATEKKNHNCFTINRDS 192
           AKPEI+K+AT   +H CF+   +S
Sbjct: 206 AKPEIIKIATTLSHHGCFSSGDES 222

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot
Match: Q8LN68 (Transcription factor TB1 OS=Oryza sativa subsp. japonica OX=39947 GN=TB1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.3e-16
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 116 SKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKL 175
           ++KDRHSKI+TA G+RDRRMRLSL VA++FF LQDMLG DK SKTV+WLL  +K  I ++
Sbjct: 114 ARKDRHSKISTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNMSKAAIREI 173

Query: 176 ATEKKNHNC 185
            ++  +  C
Sbjct: 174 MSDDASSVC 182

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot
Match: Q93WI2 (Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 0


Query: 116 SKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKL 175
           ++KDRHSKI TA G+RDRRMRLSL VA++FF LQDMLG DK SKTV+WLL  +K  I ++
Sbjct: 113 ARKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNTSKSAIQEI 172

Query: 176 ATEKKNHNC 185
             +  +  C
Sbjct: 173 MADDASSEC 181

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot
Match: Q9FYG7 (Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 113 KRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEI 172
           K++ KKDRHSKI TA+G+RDRR+RLS+ +A+QFF LQDMLG DK SKT++WLL +++  I
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 173 LKLATEKKNHN 184
            ++   K  +N
Sbjct: 143 KEVVQAKNLNN 153

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot
Match: A0AQW4 (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.7e-15
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 107 KKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLI 166
           ++V  R+ + K+DRHSKI TA+G RDRRMRLSL +A++FF LQDMLG DK SKT+EWL  
Sbjct: 102 QEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFS 161

Query: 167 QAKPEILKL 176
           ++K  I +L
Sbjct: 162 KSKTSIKQL 170

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL
Match: A0A0A0LVQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.3e-49
Identity = 109/134 (81.34%), Postives = 114/134 (85.07%), Query Frame = 0


Query: 58  SDGHNKNPPRPLAKGIPLYFDSSFARVNPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK 117
           S  +N NPP       P+    +    +PPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK
Sbjct: 61  SQNYNNNPP-------PIISTCN----SPPIDNMSMVVMNSDQKMKKMMKKVPQRKRLSK 120

Query: 118 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT 177
           KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT
Sbjct: 121 KDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEILKLAT 180

Query: 178 EKKNHNCFTINRDS 192
           EKKNHNCFTI+  S
Sbjct: 181 EKKNHNCFTISNSS 183

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL
Match: A0A6J1KF56 (transcription factor TCP18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495251 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25
Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N +M + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 61  NNNMGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 120

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 121 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 147

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL
Match: A0A6J1KJS3 (transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495251 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-25
Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N +M + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 61  NNNMGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 120

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 121 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 147

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL
Match: A0A6J1E7D2 (transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-25
Identity = 69/95 (72.63%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N  + + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 65  NKKVGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 124

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 125 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 151

[Close]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL
Match: A0A6J1E7Y5 (transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431477 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-25
Identity = 69/95 (72.63%), Postives = 76/95 (80.00%), Query Frame = 0


Query: 90  NMSMVVMNSDQKMKKMMKKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQ 149
           N  + + NSDQK  K+      RKRLSKKDRHSKITTA+G+RDRRMRLSLPVA+QFFGLQ
Sbjct: 65  NKKVGIGNSDQKKLKI-----PRKRLSKKDRHSKITTARGLRDRRMRLSLPVARQFFGLQ 124

Query: 150 DMLGVDKGSKTVEWLLIQAKPEILKLATEKKNHNC 185
           D+LGVDKGSKTVEWLL QA PEILKLA   K  NC
Sbjct: 125 DLLGVDKGSKTVEWLLTQASPEILKLA---KQRNC 151

[Close]

BLAST of CsaV3_1G006490 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-26
Identity = 70/144 (48.61%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 58  SDGHNKNPPRPLAKGIP-LYFDSSFARVNPP---------IDNMSMVVMNSDQKMKKMMK 117
           ++GH+ N   P     P L+F  +   V  P         I++   +  + D KMKK   
Sbjct: 86  NNGHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKK--- 145

Query: 118 KVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQ 177
                K+ S+ DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL Q
Sbjct: 146 ----AKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQ 205

Query: 178 AKPEILKLATEKKNHNCFTINRDS 192
           AKPEI+K+AT   +H CF+   +S
Sbjct: 206 AKPEIIKIATTLSHHGCFSSGDES 222

[Close]

BLAST of CsaV3_1G006490 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-26
Identity = 70/144 (48.61%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 58  SDGHNKNPPRPLAKGIP-LYFDSSFARVNPP---------IDNMSMVVMNSDQKMKKMMK 117
           ++GH+ N   P     P L+F  +   V  P         I++   +  + D KMKK   
Sbjct: 86  NNGHDDNQTIPNDNHHPSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKK--- 145

Query: 118 KVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQ 177
                K+ S+ DRHSKI TAKG RDRRMRLSL VAK+ FGLQDMLG DK SKTVEWLL Q
Sbjct: 146 ----AKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQ 205

Query: 178 AKPEILKLATEKKNHNCFTINRDS 192
           AKPEI+K+AT   +H CF+   +S
Sbjct: 206 AKPEIIKIATTLSHHGCFSSGDES 222

[Close]

BLAST of CsaV3_1G006490 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-17
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 113 KRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEI 172
           K++ KKDRHSKI TA+G+RDRR+RLS+ +A+QFF LQDMLG DK SKT++WLL +++  I
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 173 LKLATEKKNHN 184
            ++   K  +N
Sbjct: 143 KEVVQAKNLNN 153

[Close]

BLAST of CsaV3_1G006490 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-17
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 113 KRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLIQAKPEI 172
           K++ KKDRHSKI TA+G+RDRR+RLS+ +A+QFF LQDMLG DK SKT++WLL +++  I
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 173 LKLATEKKNHN 184
            ++   K  +N
Sbjct: 143 KEVVQAKNLNN 153

[Close]

BLAST of CsaV3_1G006490 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 107 KKVPQRKRLSKKDRHSKITTAKGVRDRRMRLSLPVAKQFFGLQDMLGVDKGSKTVEWLLI 166
           ++V  R+ + K+DRHSKI TA+G RDRRMRLSL +A++FF LQDMLG DK SKT+EWL  
Sbjct: 102 QEVQWRRTVKKRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFS 161

Query: 167 QAKPEILKL 176
           ++K  I +L
Sbjct: 162 KSKTSIKQL 170

The following BLAST results are available for this feature:

BLAST of CsaV3_1G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652537.1	1.2e-105	100.00	hypothetical protein Csa_014315 [Cucumis sativus]	[more]
XP_011650456.1	4.7e-49	81.34	transcription factor TCP18 [Cucumis sativus]	[more]
XP_038895175.1	1.7e-30	68.64	transcription factor TCP18-like [Benincasa hispida]	[more]
XP_023000972.1	3.6e-25	73.68	transcription factor TCP18-like isoform X2 [Cucurbita maxima]	[more]
KAG6584372.1	3.6e-25	73.68	Transcription factor TCP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of CsaV3_1G006490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1YKT1	2.2e-25	48.61	Transcription factor TCP18 OS=Arabidopsis thaliana OX=3702 GN=TCP18 PE=1 SV=1	[more]
Q8LN68	9.3e-16	59.42	Transcription factor TB1 OS=Oryza sativa subsp. japonica OX=39947 GN=TB1 PE=1 SV...	[more]
Q93WI2	1.2e-15	59.42	Transcription factor TEOSINTE BRANCHED 1 OS=Zea mays OX=4577 GN=TB1 PE=2 SV=2	[more]
Q9FYG7	1.2e-15	56.34	Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1	[more]
A0AQW4	2.7e-15	59.42	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]

BLAST of CsaV3_1G006490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVQ1	2.3e-49	81.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042180 PE=4 SV=1	[more]
A0A6J1KF56	1.8e-25	73.68	transcription factor TCP18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1KJS3	1.8e-25	73.68	transcription factor TCP18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1E7D2	5.1e-25	72.63	transcription factor TCP18-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1E7Y5	5.1e-25	72.63	transcription factor TCP18-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsaV3_1G006490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18550.1	1.6e-26	48.61	TCP family transcription factor	[more]
AT3G18550.2	1.6e-26	48.61	TCP family transcription factor	[more]
AT1G67260.1	8.7e-17	56.34	TCP family transcription factor	[more]
AT1G67260.2	8.7e-17	56.34	TCP family transcription factor	[more]
AT1G68800.1	1.9e-16	59.42	TCP domain protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 116..183 e-value: 2.3E-32 score: 112.7
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 117..175 score: 31.406963
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 92..186
None	No IPR available	PANTHER	PTHR31072:SF156	TRANSCRIPTION FACTOR TCP18	coord: 92..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G006490.1	CsaV3_1G006490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity