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CsaV3_1G006110 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAGGCTCTTTTCTCTTTCTCGCATCCTTGCATCAAGGCTCTCGAATTCCTTTCCCACTCCAACTCTCGACATTGTAAGAATTACGCTTCTTTTGCCACACAAGTGAGAACCCATAAACTCACCTCTTTCCCTCATTCCTCACTCGCCCACTTCAGGATCACTCCCGTTCATGGAGTTCTCATCCAAGTTTTGCCGAGAAAATTTATGGGTTTCTCTCAGTTCCGGCCGCCGGAAAGCGATTCATCTTCAATACTTCAAATACCCTTTTCAGGAAGAGTCTAGAACAAATTAGGTCTGAGTTGAAACTAGCTTTTGATCATCAATGGGGAGGCAGGTAATGTGTTTATTCTTTTTCCAACTTTGGCTGTTTTATCAGAACAATTTAACTCCTTGCATGTATAAACGAATTCATACATGAAGAACGTGAAGTCCTTTTGTGTCCAGAATTTCATTTTTACATCGTGCATTCGGATTTTCCCAATTGTATTGTTCTGTTGAAGTTTGCAAACGAAGAACAATTGTTGTGTTGATTACTACTGGAAATGGCATGAGGAAATTGTGAAACTTCTAACTTGGTTAGATCAGTTCAGCCACTTTAATTTCTTTGTACCCAGTTAGTGCAGTTTCACTAAATATTATATGGGTTTTGTGTAAATATTATAACACAAACGGTTATCATTTGATATTGGGAGTTCTTGAAATTTTTGGAACCTGATTTTTACAATTGTAGGGATAACATGATGATGCCTTCTGTTTCATAGGCACTAGCATTGTATTTTAGGTGTCCCCCATGGCATATAGACTCTTACTGCTTGCTGTTATGAAACTTCATTCTTTGTTATTTTAGGATTAGCATTGTTATTATATATAATGGGTTACTTTAAGTTATATCATATACCAAAATAATTTCGTAACCTTCTACATTTGAAACGGCTTGGTGAATCCTTTATTATTGAATACAATTAAACTGTTTATAGTCCTTTTAACAACGGGGAGGATGCTTGGCATCTGATAAACAAAGTTGATTATTTGGGGAAAGTTCTTATTTGGTTGGATATGAGACTTTGTTCCTTTAACCTTACATACATTTTACTGATCACATTCGACTTTCAAACATCAATATACTTATTAGAATTTGAATAATCATTGGTGTTCGTTTTGCTTTATCACTTAGGGTGTGAGTGGAGCCGTAAATGCTCTCATATTGCTTCATATATTCTTCTTCCCAAATTCGACGCTCAGTATCAAATTCTTCAGACCTGTTCTTGCCATCTTACTCGTATGCAGAACTCTAAACAGCATAAAGATTCACAGTTTACTATGAAAAATCCTGAAAGAGTTCTTGATGGTCTCATTACGGGCAGTTTTATCATTGGAGTGGACATGTTGAGGCTACCAGAGGTACGATGTTGACTAAACTTTTCTATCCAACTCCATGTTGAGTTCTCTTCTCTGTCACATATAGCTGATCTCCTCCTGTTAGGCAAATTCATAAAATTTGTATGTTCACTGCAGAATGACAACCAAATTTCAAGATCCATCCACCTGTGGGGTACTGCATTTCCAGCCTCAATCCATGCCCTTTCTGAATATCAGAAGAACTTCCATACTCGAAACTATGTTTGA ATGAACAGGCTCTTTTCTCTTTCTCGCATCCTTGCATCAAGGCTCTCGAATTCCTTTCCCACTCCAACTCTCGACATTGATCACTCCCGTTCATGGAGTTCTCATCCAAGTTTTGCCGAGAAAATTTATGGGTTTCTCTCAGTTCCGGCCGCCGGAAAGCGATTCATCTTCAATACTTCAAATACCCTTTTCAGGAAGAGTCTAGAACAAATTAGGTCTGAGTTGAAACTAGCTTTTGATCATCAATGGGGAGGCAGTTTGCAAACGAAGAACAATTGTTGTGTTGATTACTACTGGAAATGGCATGAGGAAATTGTGAAACTTCTAACTTGGTTAGATCAGTTCAGCCACTTTAATTTCTTTGTACCCAGGTGTGAGTGGAGCCGTAAATGCTCTCATATTGCTTCATATATTCTTCTTCCCAAATTCGACGCTCAGTATCAAATTCTTCAGACCTGTTCTTGCCATCTTACTCGTATGCAGAACTCTAAACAGCATAAAGATTCACAGTTTACTATGAAAAATCCTGAAAGAGTTCTTGATGGTCTCATTACGGGCAGTTTTATCATTGGAGTGGACATGTTGAGGCTACCAGAGAATGACAACCAAATTTCAAGATCCATCCACCTGTGGGGTACTGCATTTCCAGCCTCAATCCATGCCCTTTCTGAATATCAGAAGAACTTCCATACTCGAAACTATGTTTGA ATGAACAGGCTCTTTTCTCTTTCTCGCATCCTTGCATCAAGGCTCTCGAATTCCTTTCCCACTCCAACTCTCGACATTGATCACTCCCGTTCATGGAGTTCTCATCCAAGTTTTGCCGAGAAAATTTATGGGTTTCTCTCAGTTCCGGCCGCCGGAAAGCGATTCATCTTCAATACTTCAAATACCCTTTTCAGGAAGAGTCTAGAACAAATTAGGTCTGAGTTGAAACTAGCTTTTGATCATCAATGGGGAGGCAGTTTGCAAACGAAGAACAATTGTTGTGTTGATTACTACTGGAAATGGCATGAGGAAATTGTGAAACTTCTAACTTGGTTAGATCAGTTCAGCCACTTTAATTTCTTTGTACCCAGGTGTGAGTGGAGCCGTAAATGCTCTCATATTGCTTCATATATTCTTCTTCCCAAATTCGACGCTCAGTATCAAATTCTTCAGACCTGTTCTTGCCATCTTACTCGTATGCAGAACTCTAAACAGCATAAAGATTCACAGTTTACTATGAAAAATCCTGAAAGAGTTCTTGATGGTCTCATTACGGGCAGTTTTATCATTGGAGTGGACATGTTGAGGCTACCAGAGAATGACAACCAAATTTCAAGATCCATCCACCTGTGGGGTACTGCATTTCCAGCCTCAATCCATGCCCTTTCTGAATATCAGAAGAACTTCCATACTCGAAACTATGTTTGA MNRLFSLSRILASRLSNSFPTPTLDIDHSRSWSSHPSFAEKIYGFLSVPAAGKRFIFNTSNTLFRKSLEQIRSELKLAFDHQWGGSLQTKNNCCVDYYWKWHEEIVKLLTWLDQFSHFNFFVPRCEWSRKCSHIASYILLPKFDAQYQILQTCSCHLTRMQNSKQHKDSQFTMKNPERVLDGLITGSFIIGVDMLRLPENDNQISRSIHLWGTAFPASIHALSEYQKNFHTRNYV* Homology
BLAST of CsaV3_1G006110 vs. NCBI nr
Match: KGN64066.1 (hypothetical protein Csa_013348 [Cucumis sativus]) HSP 1 Score: 496.9 bits (1278), Expect = 9.7e-137 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. NCBI nr
Match: XP_004137444.1 (RHOMBOID-like protein 12, mitochondrial [Cucumis sativus] >KGN64067.1 hypothetical protein Csa_013374 [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 3.7e-11 Identity = 53/128 (41.41%), Postives = 65/128 (50.78%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. NCBI nr
Match: XP_038893963.1 (RHOMBOID-like protein 12, mitochondrial [Benincasa hispida]) HSP 1 Score: 79.0 bits (193), Expect = 6.3e-11 Identity = 56/128 (43.75%), Postives = 64/128 (50.00%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. NCBI nr
Match: XP_023519071.1 (RHOMBOID-like protein 12, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 78.6 bits (192), Expect = 8.2e-11 Identity = 53/126 (42.06%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. NCBI nr
Match: XP_022923619.1 (RHOMBOID-like protein 12, mitochondrial [Cucurbita moschata]) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-10 Identity = 51/126 (40.48%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. ExPASy TrEMBL
Match: A0A0A0LVM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039310 PE=4 SV=1) HSP 1 Score: 496.9 bits (1278), Expect = 4.7e-137 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. ExPASy TrEMBL
Match: A0A0A0LTI7 (Rhomboid domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G039320 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11 Identity = 53/128 (41.41%), Postives = 65/128 (50.78%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. ExPASy TrEMBL
Match: A0A6J1E6X7 (RHOMBOID-like protein 12, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431274 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 6.8e-11 Identity = 51/126 (40.48%), Postives = 64/126 (50.79%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. ExPASy TrEMBL
Match: A0A5D3BLA0 (RHOMBOID-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001490 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 5.7e-10 Identity = 52/128 (40.62%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of CsaV3_1G006110 vs. ExPASy TrEMBL
Match: A0A1S3BSX2 (RHOMBOID-like protein 12, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493123 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 5.7e-10 Identity = 52/128 (40.62%), Postives = 63/128 (49.22%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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