CsaV3_1G005800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G005800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Remorin_C domain-containing protein
Location	chr1: 3722835 .. 3724386 (+)
RNA-Seq Expression	CsaV3_1G005800
Synteny	CsaV3_1G005800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTTTGACTAGTCAAAGAAGGTATAGTTTTTCTCTCTATTCCTATAACGCACTTTGAACATTTGATGTTTCTTCATCAGTTTTTCATCCAGTTCATCATTTACAGCTCAAAAAGTATTAAAAGGTAAAAGATAAAAGAAGATTAAAATGACATGACTATAGTTGAAACAGAAAAGTAACCAAATTAGATCAAGAGTCATGAAGCTTAGGTTCTGTCCTCTTTTATTTGAATATTGAAAGTAATATGATCTTTGACTGCCTTGTAGAGTGAGTTTTTCTGATTCAGGACAACAAAAAAGGGATCCTACTGTCAAACCTAGTGACGGAATTCCACAGAAAAAAACATCTTTCAAAAAGGGTACTGATATGATATTTTCCCTGCACCAAATTTAATCATTTGACAAACATAATGGAAAGCTTCCTCAGCAAACTACTGCTATAACTTTAAAGCATTTTCAGTTTTCATCCATGTGATTGTAGTGCAAAAAACTTATTACTCCCCTCAACTTTCCAGATAAAAAGGAGTCTAAGACGTTACAATGGTATTTTTCAAACCAAACGAATGAGGATTATGATTCAAAGGATATAGAGTTTGCAACTGCAGTTGCATCAGCTGCATTAGCAATTCGCTCTCAAGAAGAAACAGATTTACAATATCAGAAAAAAAAGAGAGAAAGCGTGGAAGCCTCAATAACAAAGGTTAAAAGTAGAAAAGATGGCACAGCTGCACTTGCTCCCAGCATGACAAGGAGATTATCCAAAAAGGAAACACAAACAACCAATCCTGGTAAATTCAAGTAGAGCTTAGAAATTTCTTATAACAACTTCTTCTCACAAAAAATATCATGTTCATGTTCACTACACTAGGTCAATCTTCAATAAAGAAGCCAATGGGGCAGGAAAAGAGGGAATCAGTGACTGGAATTCCTAAACCTCCGGCACAGCCTAGACGAAGCCTCGTACCAACTAGAGCAGATGTGTGGGAGAGAAATAAGATGGAGAAGATTAGTAAAAGGTATATACTAAATACCAAGTGCTTTATCAGTTCAATATTCTGTTTGCTGCTGCATCCATCAATCTTCAGAAGTTGACCTCAGTTGCAGGTTCTCTAGTTCATGAAGCTCATGCACTAGATTTCTCACCTAAAATTTGCTTATCTAGATCTTTTCATTGAGAATCTCATATTTCAGGTATCTGAAGATAAAAGCTTCAATTCTTGCCTGGGAAAATGAGAAAAAAATGCATGCAAAACATCATATGGAAAAGAAAAAGGTATGTCCACACTTTCCCACACCTTTTGAATGTTCTCTTTTAAGGTCTATTAAAAAAAAATTATGTTAATGAAGGCTGAACTGGAGCGCAAAAAGGCATTGTTCCAGCAATATTACCAGGAAAACATTGCACGAATCGACCAGATTGCGGGGGGAGCAAGGGCACAGCTGGAAGAGAAGAGAAAAAGGGAAGAGAAAAAAGCAAGAGAAACAGCCAACAGAATCAGATCAACTGGACGACTTCCTGTGACGTGTTTCTGCTTCCAGTGTTACTAA

mRNA sequence

ATGGAAACTTTGACTAGTCAAAGAAGAGTGAGTTTTTCTGATTCAGGACAACAAAAAAGGGATCCTACTGTCAAACCTAGTGACGGAATTCCACAGAAAAAAACATCTTTCAAAAAGGATAAAAAGGAGTCTAAGACGTTACAATGGTATTTTTCAAACCAAACGAATGAGGATTATGATTCAAAGGATATAGAGTTTGCAACTGCAGTTGCATCAGCTGCATTAGCAATTCGCTCTCAAGAAGAAACAGATTTACAATATCAGAAAAAAAAGAGAGAAAGCGTGGAAGCCTCAATAACAAAGGTTAAAAGTAGAAAAGATGGCACAGCTGCACTTGCTCCCAGCATGACAAGGAGATTATCCAAAAAGGAAACACAAACAACCAATCCTGGTCAATCTTCAATAAAGAAGCCAATGGGGCAGGAAAAGAGGGAATCAGTGACTGGAATTCCTAAACCTCCGGCACAGCCTAGACGAAGCCTCGTACCAACTAGAGCAGATGTGTGGGAGAGAAATAAGATGGAGAAGATTAGTAAAAGGTATCTGAAGATAAAAGCTTCAATTCTTGCCTGGGAAAATGAGAAAAAAATGCATGCAAAACATCATATGGAAAAGAAAAAGGCTGAACTGGAGCGCAAAAAGGCATTGTTCCAGCAATATTACCAGGAAAACATTGCACGAATCGACCAGATTGCGGGGGGAGCAAGGGCACAGCTGGAAGAGAAGAGAAAAAGGGAAGAGAAAAAAGCAAGAGAAACAGCCAACAGAATCAGATCAACTGGACGACTTCCTGTGACGTGTTTCTGCTTCCAGTGTTACTAA

Coding sequence (CDS)

ATGGAAACTTTGACTAGTCAAAGAAGAGTGAGTTTTTCTGATTCAGGACAACAAAAAAGGGATCCTACTGTCAAACCTAGTGACGGAATTCCACAGAAAAAAACATCTTTCAAAAAGGATAAAAAGGAGTCTAAGACGTTACAATGGTATTTTTCAAACCAAACGAATGAGGATTATGATTCAAAGGATATAGAGTTTGCAACTGCAGTTGCATCAGCTGCATTAGCAATTCGCTCTCAAGAAGAAACAGATTTACAATATCAGAAAAAAAAGAGAGAAAGCGTGGAAGCCTCAATAACAAAGGTTAAAAGTAGAAAAGATGGCACAGCTGCACTTGCTCCCAGCATGACAAGGAGATTATCCAAAAAGGAAACACAAACAACCAATCCTGGTCAATCTTCAATAAAGAAGCCAATGGGGCAGGAAAAGAGGGAATCAGTGACTGGAATTCCTAAACCTCCGGCACAGCCTAGACGAAGCCTCGTACCAACTAGAGCAGATGTGTGGGAGAGAAATAAGATGGAGAAGATTAGTAAAAGGTATCTGAAGATAAAAGCTTCAATTCTTGCCTGGGAAAATGAGAAAAAAATGCATGCAAAACATCATATGGAAAAGAAAAAGGCTGAACTGGAGCGCAAAAAGGCATTGTTCCAGCAATATTACCAGGAAAACATTGCACGAATCGACCAGATTGCGGGGGGAGCAAGGGCACAGCTGGAAGAGAAGAGAAAAAGGGAAGAGAAAAAAGCAAGAGAAACAGCCAACAGAATCAGATCAACTGGACGACTTCCTGTGACGTGTTTCTGCTTCCAGTGTTACTAA

Protein sequence

METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYDSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRLSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLEEKRKREEKKARETANRIRSTGRLPVTCFCFQCY*

Homology

[Close]

BLAST of CsaV3_1G005800 vs. NCBI nr
Match: XP_011650064.1 (remorin 1.4 [Cucumis sativus] >KGN64032.1 hypothetical protein Csa_013108 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD 60
           METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD
Sbjct: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD 60

Query: 61  SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL 120
           SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL
Sbjct: 61  SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL 120

Query: 121 SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR 180
           SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR
Sbjct: 121 SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR 180

Query: 181 YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE 240
           YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE
Sbjct: 181 YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE 240

Query: 241 EKRKREEKKARETANRIRSTGRLPVTCFCFQCY 274
           EKRKREEKKARETANRIRSTGRLPVTCFCFQCY
Sbjct: 241 EKRKREEKKARETANRIRSTGRLPVTCFCFQCY 273

[Close]

BLAST of CsaV3_1G005800 vs. NCBI nr
Match: XP_008447778.1 (PREDICTED: remorin isoform X2 [Cucumis melo])

HSP 1 Score: 459.1 bits (1180), Expect = 2.6e-125
Identity = 248/272 (91.18%), Postives = 257/272 (94.49%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDY 60
           METLTSQRRVSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSNQ NEDY
Sbjct: 1   METLTSQRRVSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSNQMNEDY 60

Query: 61  DSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRR 120
           DSKDIEFATAVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA AP +TR 
Sbjct: 61  DSKDIEFATAVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFAPRITRP 120

Query: 121 LSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISK 180
           LSKKETQTTNPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNKME+ISK
Sbjct: 121 LSKKETQTTNPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNKMERISK 180

Query: 181 RYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQL 240
           RYLKIKASILAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAGGARA L
Sbjct: 181 RYLKIKASILAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAGGARAHL 240

Query: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           EEKRKREEKKARETANRIRSTGRLPVTCFCFQ
Sbjct: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272

[Close]

BLAST of CsaV3_1G005800 vs. NCBI nr
Match: XP_008447698.1 (PREDICTED: remorin isoform X1 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 2.4e-123
Identity = 248/278 (89.21%), Postives = 257/278 (92.45%), Query Frame = 0


Query: 1   METLTSQR------RVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSN 60
           METLTSQR      RVSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSN
Sbjct: 1   METLTSQRSSKSFKRVSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSN 60

Query: 61  QTNEDYDSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALA 120
           Q NEDYDSKDIEFATAVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA A
Sbjct: 61  QMNEDYDSKDIEFATAVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFA 120

Query: 121 PSMTRRLSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNK 180
           P +TR LSKKETQTTNPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNK
Sbjct: 121 PRITRPLSKKETQTTNPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNK 180

Query: 181 MEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAG 240
           ME+ISKRYLKIKASILAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAG
Sbjct: 181 MERISKRYLKIKASILAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAG 240

Query: 241 GARAQLEEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           GARA LEEKRKREEKKARETANRIRSTGRLPVTCFCFQ
Sbjct: 241 GARAHLEEKRKREEKKARETANRIRSTGRLPVTCFCFQ 278

[Close]

BLAST of CsaV3_1G005800 vs. NCBI nr
Match: TYJ98919.1 (remorin isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 443.4 bits (1139), Expect = 1.5e-120
Identity = 239/263 (90.87%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 10  VSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDYDSKDIEFAT 69
           VSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSNQ NEDYDSKDIEFAT
Sbjct: 31  VSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSNQMNEDYDSKDIEFAT 90

Query: 70  AVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRLSKKETQTT 129
           AVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA AP +TR LSKKETQTT
Sbjct: 91  AVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFAPRITRPLSKKETQTT 150

Query: 130 NPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKRYLKIKASI 189
           NPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNKME+ISKRYLKIKASI
Sbjct: 151 NPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNKMERISKRYLKIKASI 210

Query: 190 LAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLEEKRKREEK 249
           LAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAGGARA LEEKRKREEK
Sbjct: 211 LAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAGGARAHLEEKRKREEK 270

Query: 250 KARETANRIRSTGRLPVTCFCFQ 272
           KARETANRIRSTGRLPVTCFCFQ
Sbjct: 271 KARETANRIRSTGRLPVTCFCFQ 293

[Close]

BLAST of CsaV3_1G005800 vs. NCBI nr
Match: XP_038893935.1 (uncharacterized protein LOC120082729 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 3.1e-110
Identity = 228/272 (83.82%), Postives = 242/272 (88.97%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDY 60
           METL SQRRVSFSDSGQ K+D ++K  DGIPQKKT SFK+DKKESK L+WYFSNQ NEDY
Sbjct: 1   METLISQRRVSFSDSGQHKKDASIKRRDGIPQKKTRSFKEDKKESKKLKWYFSNQMNEDY 60

Query: 61  DSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRR 120
           DS DIE ATAVASAA AIRSQEETDLQYQKKKRES+EASI+KVKSRKD T A APS+T+R
Sbjct: 61  DSSDIELATAVASAAFAIRSQEETDLQYQKKKRESLEASISKVKSRKDNTPAFAPSITKR 120

Query: 121 LSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISK 180
           LS KE  TTNPGQSSIKKPM QEK+ES+TGIP PP  PRRSLVPTRADVWERNKMEKI+K
Sbjct: 121 LSNKE--TTNPGQSSIKKPMEQEKKESMTGIPIPP--PRRSLVPTRADVWERNKMEKINK 180

Query: 181 RYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQL 240
           RY KIKASIL WENE+KM AK HMEKKK ELE KKALF QYYQ+NIARIDQIAGGARAQL
Sbjct: 181 RYHKIKASILVWENERKMRAKLHMEKKKVELEHKKALFLQYYQDNIARIDQIAGGARAQL 240

Query: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           EEKRKREE KARETANRIRSTGRLPVTCFC Q
Sbjct: 241 EEKRKREENKARETANRIRSTGRLPVTCFCLQ 268

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 169 WERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARI 228
           WE ++  K   +  K  A + AWEN KK   +  ++K + +LE+KKA + +  +  +A I
Sbjct: 110 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 169

Query: 229 DQIAGGARAQLEEKRKREEKKARETANRIRSTGRLP-VTCFCF 271
            + A   RA +E KR  +  KA ETA + R+TG +P  TC CF
Sbjct: 170 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.7e-07
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 169 WERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARI 228
           WE ++  K   R  K  + + AWEN KK   +  + K + +LE+KKA + +  +  +A I
Sbjct: 88  WEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAI 147

Query: 229 DQIAGGARAQLEEKRKREEKKARETANRIRSTGRLP-VTCFCF 271
            ++A   RA +E K+  E  KA E   + R+TG +P  TC CF
Sbjct: 148 HKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL
Match: A0A0A0LTG1 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G038990 PE=3 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 9.6e-142
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD 60
           METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD
Sbjct: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDYD 60

Query: 61  SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL 120
           SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL
Sbjct: 61  SKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRL 120

Query: 121 SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR 180
           SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR
Sbjct: 121 SKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKR 180

Query: 181 YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE 240
           YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE
Sbjct: 181 YLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLE 240

Query: 241 EKRKREEKKARETANRIRSTGRLPVTCFCFQCY 274
           EKRKREEKKARETANRIRSTGRLPVTCFCFQCY
Sbjct: 241 EKRKREEKKARETANRIRSTGRLPVTCFCFQCY 273

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL
Match: A0A1S3BHL8 (remorin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490088 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 248/272 (91.18%), Postives = 257/272 (94.49%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDY 60
           METLTSQRRVSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSNQ NEDY
Sbjct: 1   METLTSQRRVSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSNQMNEDY 60

Query: 61  DSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRR 120
           DSKDIEFATAVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA AP +TR 
Sbjct: 61  DSKDIEFATAVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFAPRITRP 120

Query: 121 LSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISK 180
           LSKKETQTTNPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNKME+ISK
Sbjct: 121 LSKKETQTTNPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNKMERISK 180

Query: 181 RYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQL 240
           RYLKIKASILAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAGGARA L
Sbjct: 181 RYLKIKASILAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAGGARAHL 240

Query: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           EEKRKREEKKARETANRIRSTGRLPVTCFCFQ
Sbjct: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL
Match: A0A1S3BI00 (remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490088 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.2e-123
Identity = 248/278 (89.21%), Postives = 257/278 (92.45%), Query Frame = 0


Query: 1   METLTSQR------RVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSN 60
           METLTSQR      RVSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSN
Sbjct: 1   METLTSQRSSKSFKRVSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSN 60

Query: 61  QTNEDYDSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALA 120
           Q NEDYDSKDIEFATAVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA A
Sbjct: 61  QMNEDYDSKDIEFATAVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFA 120

Query: 121 PSMTRRLSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNK 180
           P +TR LSKKETQTTNPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNK
Sbjct: 121 PRITRPLSKKETQTTNPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNK 180

Query: 181 MEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAG 240
           ME+ISKRYLKIKASILAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAG
Sbjct: 181 MERISKRYLKIKASILAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAG 240

Query: 241 GARAQLEEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           GARA LEEKRKREEKKARETANRIRSTGRLPVTCFCFQ
Sbjct: 241 GARAHLEEKRKREEKKARETANRIRSTGRLPVTCFCFQ 278

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL
Match: A0A5D3BIU6 (Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001160 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 7.1e-121
Identity = 239/263 (90.87%), Postives = 248/263 (94.30%), Query Frame = 0


Query: 10  VSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDYDSKDIEFAT 69
           VSFSDSGQQKRDPT+KP DGIPQKKT SFK+DKKESK LQWYFSNQ NEDYDSKDIEFAT
Sbjct: 31  VSFSDSGQQKRDPTIKPRDGIPQKKTRSFKEDKKESKKLQWYFSNQMNEDYDSKDIEFAT 90

Query: 70  AVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRRLSKKETQTT 129
           AVASAA AIRS+EETDLQYQKKKRES+EASITKVKSRKD TAA AP +TR LSKKETQTT
Sbjct: 91  AVASAAFAIRSKEETDLQYQKKKRESMEASITKVKSRKDDTAAFAPRITRPLSKKETQTT 150

Query: 130 NPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISKRYLKIKASI 189
           NPGQSSIK+PM QEKRESVTGIPKPPA PRRSL+P+RADVWERNKME+ISKRYLKIKASI
Sbjct: 151 NPGQSSIKRPMEQEKRESVTGIPKPPAPPRRSLIPSRADVWERNKMERISKRYLKIKASI 210

Query: 190 LAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQLEEKRKREEK 249
           LAWENEKKMHAK HMEKKK ELERKKALFQQYY ENIARIDQIAGGARA LEEKRKREEK
Sbjct: 211 LAWENEKKMHAKLHMEKKKDELERKKALFQQYYHENIARIDQIAGGARAHLEEKRKREEK 270

Query: 250 KARETANRIRSTGRLPVTCFCFQ 272
           KARETANRIRSTGRLPVTCFCFQ
Sbjct: 271 KARETANRIRSTGRLPVTCFCFQ 293

[Close]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL
Match: A0A6J1C6Y1 (uncharacterized protein At3g61260 OS=Momordica charantia OX=3673 GN=LOC111008969 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 6.3e-101
Identity = 213/272 (78.31%), Postives = 233/272 (85.66%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRDPTVKPSDGIPQKKT-SFKKDKKESKTLQWYFSNQTNEDY 60
           METL SQRRVSF DSGQ K+D ++K  DGIPQ KT SFK+DKK SK LQW+FSNQ NED+
Sbjct: 1   METLVSQRRVSFGDSGQHKKDASIKSRDGIPQPKTRSFKEDKKGSKGLQWHFSNQMNEDH 60

Query: 61  DSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRR 120
           DS+DIEFATAVASAALAI S EETDLQ+QKK RES+E  +TKVKS KD TAA+  S+TRR
Sbjct: 61  DSRDIEFATAVASAALAIHSLEETDLQHQKKIRESLETPMTKVKSIKDDTAAIPTSVTRR 120

Query: 121 LSKKETQTTNPGQSSIKKPMGQEKRESVTGIPKPPAQPRRSLVPTRADVWERNKMEKISK 180
           LS KE  TTNPGQSSIKKPMGQEK+E  TGIP PP  PR++LV TRADVWER+KME+I K
Sbjct: 121 LSNKE--TTNPGQSSIKKPMGQEKKEPGTGIPLPP--PRQNLVQTRADVWERDKMERIRK 180

Query: 181 RYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARAQL 240
           RY K+K+SILAWENEKKMHAK  MEKKKAELERKK LF QYYQ+NI RIDQIAGGARAQL
Sbjct: 181 RYQKMKSSILAWENEKKMHAKLQMEKKKAELERKKVLFLQYYQDNIVRIDQIAGGARAQL 240

Query: 241 EEKRKREEKKARETANRIRSTGRLPVTCFCFQ 272
           EEKRK EE KARETANRIR TGRLPVTCFCFQ
Sbjct: 241 EEKRKNEEDKARETANRIRLTGRLPVTCFCFQ 268

[Close]

BLAST of CsaV3_1G005800 vs. TAIR 10
Match: AT5G61280.1 (Remorin family protein )

HSP 1 Score: 128.3 bits (321), Expect = 9.8e-30
Identity = 97/276 (35.14%), Postives = 148/276 (53.62%), Query Frame = 0


Query: 1   METLTSQRRVSFSDSGQQKRD-PTVKPSDGIPQKKTSFKKDKKESKTLQWYFSNQTNEDY 60
           M+ L  QRR   S S   K D P +   D       ++ K++       WY   + N+ Y
Sbjct: 1   MDNLVKQRRRRVSISENIKTDLPMLSELDITDYPALNWLKNQS-----YWY---EKNDYY 60

Query: 61  DSKDIEFATAVASAALAIRSQEETDLQYQKKKRESVEASITKVKSRKDGTAALAPSMTRR 120
           + K+ E A +VA AA  IRS EE D Q  K+ RE ++ S T     K     +  +  +R
Sbjct: 61  NEKESELAVSVAVAAFVIRSMEEADKQKSKRIREEIKRSRT-----KKSNLVIPNTQVKR 120

Query: 121 LSKKETQTTNPGQSSIKKPMGQEKRES--VTGIPKPPAQPRRSLVPTRADVWERNKMEKI 180
           LSK  TQ    G+ S +K + +   E+     I         +   ++AD WE+++++KI
Sbjct: 121 LSKSYTQEVKIGEESFRKKLLEYPSENRRPQEIGSSSGTSGLASASSKADSWEKSQIKKI 180

Query: 181 SKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARIDQIAGGARA 240
             RY K+KA I+ WENE+K+ A   MEK+K+ELE++K +  Q+Y+  +ARI  IA GA+ 
Sbjct: 181 RLRYEKMKADIVGWENERKLAATLLMEKRKSELEKRKGINNQHYKSKLARIQLIADGAKK 240

Query: 241 QLEEKRKREEKKARETANRIRSTGRLPVTCFCFQCY 274
           QLEEKR+ +E +      ++  TG++P   FCF+CY
Sbjct: 241 QLEEKRRSKEAQVHGKVKKMSRTGKVPNNYFCFRCY 263

[Close]

BLAST of CsaV3_1G005800 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-12
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 0


Query: 123 KETQTTNPGQSSIKKPMGQEKR-------ESVTGIPKPPAQPRRSLVPTR---------- 182
           K+ Q +       +KP+ +  R        S    P PP  P  S  P R          
Sbjct: 169 KQNQDSEEKHERQRKPVSEPPRIQPPLRTRSEPRAPPPPPPPLLSPSPLRLPPRETKRQS 228

Query: 183 -----------ADVWERNKMEKISKRYLKIKASILAWENEKKMHAKHHME-KKKAELERK 242
                      AD WE+ ++ KI  RY K+   I  WE +K+  A+  ++  +++ELE++
Sbjct: 229 SEHTSRKDDSTADAWEKAELSKIKARYEKLNRKIDLWEAKKREKARRKLDISEQSELEQR 288

Query: 243 KALFQQYYQENIARIDQIAGGARAQLEEKRKREEKKARETANRIRSTGRLPVTCFCF 271
           +    Q ++E+   I+QIA GARAQ E+ R+ +E K +E A  IRSTG+LP    CF
Sbjct: 289 RKRGLQRFREDTEYIEQIAAGARAQAEKDRQSKEFKVKEKAGVIRSTGKLPGNACCF 345

[Close]

BLAST of CsaV3_1G005800 vs. TAIR 10
Match: AT1G69325.1 (Remorin family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.9e-11
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 167 DVWERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIA 226
           D W+  ++ K  K+Y K+   I++WE++K+  AK  + + +  +E+ K    Q +++   
Sbjct: 19  DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTERSVEKTKLKATQRFRDENE 78

Query: 227 RIDQIAGGARAQLEEKRKREEKKARETANRIRSTGRLPVTC 268
           RI+ I   ARA   E R +EE K +E AN +R+TGR P TC
Sbjct: 79  RIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119

[Close]

BLAST of CsaV3_1G005800 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-09
Identity = 38/103 (36.89%), Postives = 58/103 (56.31%), Query Frame = 0


Query: 169 WERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARI 228
           WE ++  K   +  K  A + AWEN KK   +  ++K + +LE+KKA + +  +  +A I
Sbjct: 110 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 169

Query: 229 DQIAGGARAQLEEKRKREEKKARETANRIRSTGRLP-VTCFCF 271
            + A   RA +E KR  +  KA ETA + R+TG +P  TC CF
Sbjct: 170 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]

BLAST of CsaV3_1G005800 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.2e-08
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 169 WERNKMEKISKRYLKIKASILAWENEKKMHAKHHMEKKKAELERKKALFQQYYQENIARI 228
           WE ++  K   R  K  + + AWEN KK   +  + K + +LE+KKA + +  +  +A I
Sbjct: 88  WEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAI 147

Query: 229 DQIAGGARAQLEEKRKREEKKARETANRIRSTGRLP-VTCFCF 271
            ++A   RA +E K+  E  KA E   + R+TG +P  TC CF
Sbjct: 148 HKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of CsaV3_1G005800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650064.1	2.0e-141	100.00	remorin 1.4 [Cucumis sativus] >KGN64032.1 hypothetical protein Csa_013108 [Cucum...	[more]
XP_008447778.1	2.6e-125	91.18	PREDICTED: remorin isoform X2 [Cucumis melo]	[more]
XP_008447698.1	2.4e-123	89.21	PREDICTED: remorin isoform X1 [Cucumis melo]	[more]
TYJ98919.1	1.5e-120	90.87	remorin isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038893935.1	3.1e-110	83.82	uncharacterized protein LOC120082729 [Benincasa hispida]	[more]

BLAST of CsaV3_1G005800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2D8	1.0e-07	36.89	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	8.7e-07	34.95	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of CsaV3_1G005800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTG1	9.6e-142	100.00	Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G038990 P...	[more]
A0A1S3BHL8	1.3e-125	91.18	remorin isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490088 PE=3 SV=1	[more]
A0A1S3BI00	1.2e-123	89.21	remorin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490088 PE=3 SV=1	[more]
A0A5D3BIU6	7.1e-121	90.87	Remorin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0...	[more]
A0A6J1C6Y1	6.3e-101	78.31	uncharacterized protein At3g61260 OS=Momordica charantia OX=3673 GN=LOC111008969...	[more]

BLAST of CsaV3_1G005800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61280.1	9.8e-30	35.14	Remorin family protein	[more]
AT1G13920.1	7.0e-12	31.64	Remorin family protein	[more]
AT1G69325.1	5.9e-11	35.64	Remorin family protein	[more]
AT3G61260.1	7.3e-09	36.89	Remorin family protein	[more]
AT2G45820.1	6.2e-08	34.95	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..223
None	No IPR available	COILS	Coil	Coil	coord: 236..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	PANTHER	PTHR31471:SF5	GB\|AAD39278.1	coord: 32..269
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 32..269
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 164..265 e-value: 4.4E-27 score: 94.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G005800.1	CsaV3_1G005800.1	mRNA