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CsaV3_1G005550 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGACAAAGCTTGACTTGGGATGTCACTGTTTGAACATAAAATTTCATTGCAAAATCCATCGAAACCCTTAGCCGACGGGCCGTTTGGAGAGAAGACTTGAAGAAGAAGATACCACGAGGCACGAAACTTCTTAGAACTTTATACAATTACTTCTTTAACACCAAACAACTATCTAAAGTCATTGCTTTCACTCCCTCCATTTCCCCATTTTCATCTTCTAATTTTCTCGGAAGTTACACTGTTGATTCTCAAAACACGCAAACCCAACCGCCCAATAATTCAGAAACAACAATCACTTTAATCCTTGACCCCAAATACAGACATTCTTTACTCCACATATAAATTGCCAACCCCATCAGTCTTCTTCTCTTATCTGCTTACTAAACTGCCCATTTACATATCTATGCTACTTGTTCTTTTACTCTTTTCAAAATGGAACCCATTGACGTCGTTGATTATACCAACCCCATTTCAGTTTTCCATATTTTGTTTCTGTTTTTTCTCAATTTCATACTTGGACGTTTCTTTCCAGGGTTATTCAACATTTTCATACTCTCTGCTGCATTTATTTTTTATCTCTGGAATTCATGGGTTGCCCAACGTAGCATCATCACACCAAGTGTTCGACGAAATGACCATGAAGAGCATTGCTGCTGCACAAAAATCGTGGGAATGCTTGTTAATGACAAACGGGTCGAGCAAGCGAAACTATCGATTGAAGATGTGAAAACTATGATGGAGGTACTTGATCATGAACATAATAACAATAATAGGGATAGTGATAGTGATAATCTTGAGCTTGAGGGGATGTTTGAGGAAGAAGTGAGTTTGGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAAGATTTGAAGAAAGTGTTGTGTGGGTTGGGATTGATTACAGTGGGTTCAGACATTGATGAATGTAAGAGAATGTTAAGTGGGTTTGACAATGATGGAGATGGACGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGCTTCTGTTGAAAACATCTCTTTGTTTGTTAAAAACAGGACTCTTCCTAAATGTAAATTAGTCTTTGAAAATAAACAAACTGTTTTAGGTACTTGAAGGTTCATTTGTTACAAGACCATTTGTTTAAGTTTGTTTTTTTTGAAACGCTCTTCGTGAAAATGCACGAGGTATTTGTCGATGAACTAGAAGAAATATGTATGACAATATATAAGAAGAATTACTAATGCTCCGGTGGAGTTGATGATTATGTATTGTATTTTTTATTTAAGATTCAAATTGTGAAACCATTTCTATCTTTTTGGAAGAGACCCGTTGGAGTAAGCAAGCAGTGTGAAAGAGAAAGGTTTTGCTTTGAAAGACTTTCTTTCTAAAGCCACACTTTTAATTGAAGAAAAGAAAATGTTGAACTCTTTTCTTTTTGTATTCTTTTGAACAATACTTATGGATGCAAACTTAAAACTGTT ATGGAACCCATTGACGTCGTTGATTATACCAACCCCATTTCAGTTTTCCATATTTTGTTTCTGTTTTTTCTCAATTTCATACTTGGACGTTTCTTTCCAGGGTTATTCAACATTTTCATACTCTCTGCTGCATTTATTTTTTATCTCTGGAATTCATGGGTTGCCCAACGTAGCATCATCACACCAAGTGTTCGACGAAATGACCATGAAGAGCATTGCTGCTGCACAAAAATCGTGGGAATGCTTGTTAATGACAAACGGGTCGAGCAAGCGAAACTATCGATTGAAGATGTGAAAACTATGATGGAGGTACTTGATCATGAACATAATAACAATAATAGGGATAGTGATAGTGATAATCTTGAGCTTGAGGGGATGTTTGAGGAAGAAGTGAGTTTGGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAAGATTTGAAGAAAGTGTTGTGTGGGTTGGGATTGATTACAGTGGGTTCAGACATTGATGAATGTAAGAGAATGTTAAGTGGGTTTGACAATGATGGAGATGGACGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGCTTCTGTTGA ATGGAACCCATTGACGTCGTTGATTATACCAACCCCATTTCAGTTTTCCATATTTTGTTTCTGTTTTTTCTCAATTTCATACTTGGACGTTTCTTTCCAGGGTTATTCAACATTTTCATACTCTCTGCTGCATTTATTTTTTATCTCTGGAATTCATGGGTTGCCCAACGTAGCATCATCACACCAAGTGTTCGACGAAATGACCATGAAGAGCATTGCTGCTGCACAAAAATCGTGGGAATGCTTGTTAATGACAAACGGGTCGAGCAAGCGAAACTATCGATTGAAGATGTGAAAACTATGATGGAGGTACTTGATCATGAACATAATAACAATAATAGGGATAGTGATAGTGATAATCTTGAGCTTGAGGGGATGTTTGAGGAAGAAGTGAGTTTGGGGGAAGTTAAGGAAGCTTTTGATTTGTTTGATGAGAATGGTGATGGGTTTATTGATGCAGAAGATTTGAAGAAAGTGTTGTGTGGGTTGGGATTGATTACAGTGGGTTCAGACATTGATGAATGTAAGAGAATGTTAAGTGGGTTTGACAATGATGGAGATGGACGTTTAGATTTTGAAGAATTTGCTAAGCTTGTTGAACAGAGCTTCTGTTGA MEPIDVVDYTNPISVFHILFLFFLNFILGRFFPGLFNIFILSAAFIFYLWNSWVAQRSIITPSVRRNDHEEHCCCTKIVGMLVNDKRVEQAKLSIEDVKTMMEVLDHEHNNNNRDSDSDNLELEGMFEEEVSLGEVKEAFDLFDENGDGFIDAEDLKKVLCGLGLITVGSDIDECKRMLSGFDNDGDGRLDFEEFAKLVEQSFC* Homology
BLAST of CsaV3_1G005550 vs. NCBI nr
Match: XP_004137586.1 (probable calcium-binding protein CML47 [Cucumis sativus] >KGN64007.1 hypothetical protein Csa_013235 [Cucumis sativus]) HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-110 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. NCBI nr
Match: KAA0036089.1 (putative calcium-binding protein CML30 [Cucumis melo var. makuwa] >TYJ98897.1 putative calcium-binding protein CML30 [Cucumis melo var. makuwa]) HSP 1 Score: 310.8 bits (795), Expect = 8.5e-81 Identity = 169/216 (78.24%), Postives = 181/216 (83.80%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. NCBI nr
Match: XP_008445901.1 (PREDICTED: probable calcium-binding protein CML30 [Cucumis melo]) HSP 1 Score: 308.1 bits (788), Expect = 5.5e-80 Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. NCBI nr
Match: XP_038895011.1 (probable calcium-binding protein CML45 [Benincasa hispida]) HSP 1 Score: 262.7 bits (670), Expect = 2.7e-66 Identity = 141/213 (66.20%), Postives = 165/213 (77.46%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. NCBI nr
Match: KAG7020054.1 (putative calcium-binding protein CML45, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.5 bits (641), Expect = 6.1e-63 Identity = 140/215 (65.12%), Postives = 160/215 (74.42%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy Swiss-Prot
Match: Q93Z27 (Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.0e-17 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy Swiss-Prot
Match: Q9MBG5 (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-15 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13 Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy Swiss-Prot
Match: Q9SN89 (Probable calcium-binding protein CML47 OS=Arabidopsis thaliana OX=3702 GN=CML47 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12 Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy Swiss-Prot
Match: Q9ZR02 (Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy TrEMBL
Match: A0A0A0LTE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033260 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.0e-111 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy TrEMBL
Match: A0A5A7T3X0 (Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00940 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 4.1e-81 Identity = 169/216 (78.24%), Postives = 181/216 (83.80%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy TrEMBL
Match: A0A1S3BEM1 (probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103488781 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80 Identity = 168/216 (77.78%), Postives = 180/216 (83.33%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy TrEMBL
Match: A0A6J1KID5 (probable calcium-binding protein CML47 OS=Cucurbita maxima OX=3661 GN=LOC111495509 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 8.6e-63 Identity = 139/215 (64.65%), Postives = 160/215 (74.42%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. ExPASy TrEMBL
Match: A0A6J1ECX5 (probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC111431403 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.9e-49 Identity = 114/176 (64.77%), Postives = 131/176 (74.43%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. TAIR 10
Match: AT5G39670.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. TAIR 10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16 Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family ) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-14 Identity = 35/75 (46.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. TAIR 10
Match: AT3G47480.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 75.1 bits (183), Expect = 7.3e-14 Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 0
BLAST of CsaV3_1G005550 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family ) HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13 Identity = 34/74 (45.95%), Postives = 54/74 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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