CsaV3_1G005410 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTTCAGGGCAGTGGCTGGAGAAGGCGTTGGATGATCTCTGCAAGAAGATGGAAACTGGTTGGGGTCTCGATAAGGATATGATTTCTGGCTTGGTTTCATACTGTGAGCTCGCCCAGCCCCAAGACGCTAAAGAGTATCTTGATGTAAATTTCTTAGCTCGGCTTCCTTTTTTTGTTTTTTTTTTGTGCAATAATCTGAATGATTGA ATGGCGACTTCAGGGCAGTGGCTGGAGAAGGCGTTGGATGATCTCTGCAAGAAGATGGAAACTGGTTGGGGTCTCGATAAGGATATGATTTCTGGCTTGGTTTCATACTGTGAGCTCGCCCAGCCCCAAGACGCTAAAGAGTATCTTGATGTAAATTTCTTAGCTCGGCTTCCTTTTTTTGTTTTTTTTTTGTGCAATAATCTGAATGATTGA ATGGCGACTTCAGGGCAGTGGCTGGAGAAGGCGTTGGATGATCTCTGCAAGAAGATGGAAACTGGTTGGGGTCTCGATAAGGATATGATTTCTGGCTTGGTTTCATACTGTGAGCTCGCCCAGCCCCAAGACGCTAAAGAGTATCTTGATGTAAATTTCTTAGCTCGGCTTCCTTTTTTTGTTTTTTTTTTGTGCAATAATCTGAATGATTGA MATSGQWLEKALDDLCKKMETGWGLDKDMISGLVSYCELAQPQDAKEYLDVNFLARLPFFVFFLCNNLND* Homology
BLAST of CsaV3_1G005410 vs. NCBI nr
Match: KAE8652507.1 (hypothetical protein Csa_014043 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 7.9e-34 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. NCBI nr
Match: KAA0036077.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. NCBI nr
Match: XP_038894201.1 (uncharacterized protein LOC120082886 [Benincasa hispida]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. NCBI nr
Match: XP_023001344.1 (uncharacterized protein LOC111495503 [Cucurbita maxima]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. NCBI nr
Match: XP_022923752.1 (uncharacterized protein LOC111431364 [Cucurbita moschata]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. ExPASy TrEMBL
Match: A0A5A7T3B5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00710 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.5e-22 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. ExPASy TrEMBL
Match: A0A6J1KMG5 (uncharacterized protein LOC111495503 OS=Cucurbita maxima OX=3661 GN=LOC111495503 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. ExPASy TrEMBL
Match: A0A0A0LSM8 (zf-C2HC5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033090 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. ExPASy TrEMBL
Match: A0A6J1E707 (uncharacterized protein LOC111431364 OS=Cucurbita moschata OX=3662 GN=LOC111431364 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. ExPASy TrEMBL
Match: A0A1S3B4L7 (uncharacterized protein C1A6.01c OS=Cucumis melo OX=3656 GN=LOC103485946 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_1G005410 vs. TAIR 10
Match: AT3G47610.1 (transcription regulators;zinc ion binding ) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15 Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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