CsaV3_1G005120 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G005120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Small glutamine-rich tetratricopeptide repeat-containing protein beta
Location	chr1: 3405378 .. 3414808 (-)
RNA-Seq Expression	CsaV3_1G005120
Synteny	CsaV3_1G005120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATGAAAGATGTATTAAATTGTAAGATCTCTCTTGCTCATGCAAAGCCAAACACTGATAAAATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCGCTGACAGTAATAAAAGCGAAAGAAAGAACTAAAACAAAAAAAATACCAAAAGCAAAGGGATAGAAAGGGGGAATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGTATTTTGTTCTGTGATATGATATTGATATTGTTCATGCGTAGTTTTTCACTCTTCGGTCTGAGAATTCTGTTCTGATCAATACATTATGTATGATGTCCTGCTTCAATTTGTTGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCTACTCATAGTTCTATGTTCTATCATATTATATATAATCGTGTGCTATCTGTCCCCTCTTATACTAAGTTTGGTAACTATAATTGAACTTATGGCGGTAAACACTGACAATTATTGTTACTCGTCGATTTATCCTGCATGTTTCTAGCATTTGTATATTTCTGGACTTAAAAAATTGTTTGTAAATGTATTTGCTAAAGCAGATGCATCCAGAAAATATAGTTTCACAGAACTAGTAAATTTTCAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGTGAGAAGTATTTTATATATTCATTGTGTGCATTACATTTCATCTAAAAAAATTAGACGGTGGTTTCGAGAAAATAACTAGGCTGTTTACACTTCAACGAGTCTGGGTTGTGAATATAATCATTACTGAAGAGACATTGTTTGGAACTACCAACTGCGGAGAGTACCTCAATATTTTCTACAAGGTTTTTTACTTATATTCCTATCTCTTCCACTCCAAATGTTTTTAAGCAGATTTGCGTAGCACTAAACTTTAAGTGTCGACTAAAAGAAAATTTGGAGGTTAACAGGGAAATTTTGGACGTGAACAAAAATTATTATTCGGGGATCAATATTTTGTTAGGCTACCTGAGTCTTTGTGATGCTTGAATCTTTACATGTTAATATTATAATTGAATGCTAAGAAACAGTAATTGCGGTGGACAAGGTTAAAGAAGAAAAAGGAAAATAAATAGAAATCTTAGTTGAAAAGTCAAAAGACTGATGATGCTCAACTCTAATTTAGAGGTCCTTCAAACATGCAACCAACTAGTAGAACATGCAATCCTTTTGAGACAATTACAAATTCTTATCCTTCAATTGAAAAGATGTGAGAAGAAATGATTCTTGCTCTAGAGTAGATTATCGTATTATTCCTGGGATGCATTTCTTAATTTCAATTTGCAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGTATTGATTCACTTATCTTTATATGAGCATACTATGGACAATTTCATCACTGGGACAAAAGAGACTCACTTTAACCAACTAATTTTCAGCATATTTGCTCCCCAACCAAGGATTTTATTTATTTATTTTATTAACTTTTGGTTTATAGGAAGCACCCAGAACCATATTTAAGATGGTTTACCATTGAAATGTTGGTTGGGATTGGCTGAAAGAATTTTGGAGCTATTTTCTGCTTTTGAGGACAAAATTCAATAATTTATTAATTAGCTTTAAAAAAACTGTTCTCAAAATGTTGTTGACACTAATGACCGGTTTGTACCCGAGAACAACTTACTTTCTTCTTATAATAACCGTAAACAAAACTGTTTCTGAAAACAGTTTCCCAGACAAGAGTATTCATTTATGATCTTCTTTTAAATTCTTTTGATCCCAAACCGGGCACAGTTTCTGAAGTGTTTGCTATCAAATTTTCTCAATTAACACTTTCAATCATAAGATTTGTACCCTTTTGGAGTGATCCGTCCTTGTAATTTTACAAAATGGCATAAAGAAGTCAGTTTTTGTCTAGTGCTGCTGGAATGCCTGTTTGGGAGAAGGTTACATTTTAATATTTCACCGCCATTTCTTCAATAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTAGGTCAAGGAAGAAAGGTAACTAATGAAAACAGTTCGAGACTCTGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGCCTTTGAAATTCTCATTAGATTAAATACATATAAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAAAATGATTTTAATATCAGGGAAAATAGGCGAAGAAAAGCATCAGATAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGGGCTTATAAAATTCACTTCAAAGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTTAAGAATCTTCTGGCATTAGATAATTCTTAATCATTTTAATGTTGGAGGAAAAAACATTGCAAATTTCGCAGTCTCATAAACATTAGTCTTAGAGCACGCGTTCACATGGTGAAAGTGATTGCTGACATGAAGAGGAGGATGGAGATCTAGGTTGGGGATTTTGACTTTTGCTTGTATTTAGTTATTAATATGATTGTCGCAGGCATGAATTAGTATAGTAGCCAAACACACTAAAATGTTTGCATTAATTCCCCCCCCCCCCCCCCCCCCCCCCCCAATTTCTGACATGGTTAGACATGACTTTAACCCAAAACTTATGATTTTTTCTTCTTAAAATTTCATTACATATTGATAAATCCTAAAGTAGTATTAGGAATTTAGGATGATATCTTCATCCTCTAGTCTTAACTAATTAAATAATTTTATATCTTGTAAGATTTCAAATATCATTGATTGAATGTTTTTACTGAAGTACATCTTGTTTTTATGTTAAGTTTACAAGCTTTAGTATTAATATATCAATATAGGCACATCAGGTCGTCTGGTCCACTTAGCAGAGTTAATATGATGAAAATATTATGTTTATATTTTGAATGTAGGATTGTAAGATGGAATTCTTTGTGATAAATGTAAAAAGTGGAGAAAAAGGGAAATATAAAGTTACTTTATAAGTGTAAAAAGTAGAAATAACGAGGAGGGTGGAGTTCCTCGATAAATATGAAAGTAGAGAGAAAGAGGAATATGACGTTACTGAATAAGGGAGGAAAGTTCAATAGTGTTCACTATCGAAGTTGTGTTTAACAACCAACTTAAGAAATGGGTGAGCTACGGTTTAGTCAACCCCATAATATGTGTCTCTAACATGTACATGTTCTACTTTTAAAGAAATTGATGTGTCATAATGTCCGTGTAGGTGTGCTTCTCATGCTGGAATAACATACTGTTAAGTATTAACTCCAAGAAACCTCTTTGGGAAATTTATTTTTCAAGTAAGTGAATCTATTTTATTTTGGAGAAGTGCCTCTTTGGTAGATATGCTGTCCCAAAGTTTTAATTTAGCCAACATCTCTCAGTGTTGAAAAATAGGTTTCAAATGTCTCAACGACATTAATTAGGTTCTTTAATTATTATTTAAAACATTTTTAAACTTAAAAAAAATATTTCTCTCTTCCTTTCAACACTATATGCTTTTTAATTCATTCAGAAAAATACTAACTAAGATTAACAGAATCAAAATGAATGGGAAATAGATTAGGGAATCAATGTTGAAGGCATATTTGTTGTTATGTTATGATTTTGAATCCCCTTGTCATTTGTTTGTTGGCTTTCAATGATGGAGTTTCTCACCGGTCTGGGATCAAAGTTTTTAAAACTTTGTGGGTAGATCTTAGAACTCAGACCAAATCATTTTCTTCCTCTTCATTTGTTTCGCTCCAACTGGTTTGGCCAAAAGACTAAAAGAAGTATTTTCCCTAAGTTTTTTTCATTGGTACCTATCCTGATCTGGATCCATTATAATATCTATTCTTGTTGTCTTTTCTACCTGGAATGTTTGCTCCACAAGTAGACAAAGAAAAAAGAATAGAAAAACCCTCCATGATTAGGAAGCTTTATACATTCTCCATTCCTTTCCTTGATAATATTCTTTTCTTCTGATGGGGTAGATTTTGAAAGTGATTCATTGAGGTTTTTGCCATTGAAATCTCCTTGACCTGCCGGATATTAATGCATTTTATAAATATTTTTTAAGGTTTAGAAGTCTATTTGGATCGACTCCCTAAGAGCTTAGGAATGTAAAAAAAAAAACGTTATTAGTGTCATTGCAAATAAGTTGGTTGAGAGTTACTTACCTTATCTAATCACTATTATTGTTCCATAAGATTATTGCTTGTATGGATATTACCTTATCTAACGCTTGTATGGATGGTAAAGTTAGCTTATAGGTATTTAGTAATGTGTGCCTGAAATTCAGCGCATTTAATGACAGGTTTTGTTGATTAAAATAATTGTCAGCTTTATCTAAAGCACAACCAAAATTATTATAAGCAAAAACATGAGCCACTTAAAATTATTGGAGAGATGTATTTGTATTGTAACTGGAAACTTTACCCAATTGTACATAATTAGTTTGGTGTTATAGTGCATTTATGAAGCTGTTGATTGAATATGTTTGGGAGGATAAACCGACTCATTCCACTAGTTACATCACAGCTAAAAACAGAAAAACTTGAAAACTATTTCATACCGCTTTCTAATACTAAGGGATTAGTGTCCATCCAATGTCACAGATGTCAATAAAGATATACTTTTACCAAAGTTATTTATAGGGGGGACTGGCTTAAATCTTAACACTGCTACGAACCCACTACCCTAAATATCTCTAGTTAGGTACGGCTTTCCCAAAATGAAAAATAGGAATTGCTAAGTAGGATTGGTGCTGTGACCACACAAAAACATGTCCATGCTCTTCACCTTTGCCCACCACTTGTAACTCTTCTTTCCGCTGCTTTTTGTTTTTCCAATGACACCAACATTCCTCTTTGATTTTAGTCTTCCGATTTGAAAGCATGCCTCCAATGTTACCTCTTTCCCATTGCTGCATCTACTCTCTACCATTGCTTTATCTGTTTTCACAAGCTGATCATAGTACTCTTTATTCCTTTTCTCCAGCCCATAGATCTGACCTTGAAGATCTTCAATTTTCTGGTTAAGTAGGTATACCCTATGATCATCTCTCAGCTTCAGCATACATCGCGCCATCTCGCCTGCCTTCTGTTTCATAAAAACAGACTCTGCTACCAACCCCTTGTTTTCCTCCATCAATGATTCCACCCTATATCCCAATCTTGCATTTTCATTCAGTAATATCAGCCTCTCAGACTCCAACACATCAAGCAAACTCTTCTGAAGCTCAATCTTTCTTGACGAATCACAGCATTGCTTTTCCAGGGTGGTTACCTCATTTGTAAGAATGTCGTACTCCACATTCTTCATCACAAGCTCAGCGATAAAAGCATCGTTGTCTACCATGCCATAGTATTTAGTTGATGTTACAGATACTTGTTGGTAGGACAGAGAGCTCTCGGCATCAGACTCGATCTGACTGATTCCTGAATCTTCAGCTCCATCAAAAGAGTCGAGGGTTGAAGTAACAGAAAACTGTCTATTGTGATGTTTTGCAACAGTTTGGATGTAGCGATCTGATAAGGTGGTGTATGCAGTGTACAGTTCTTGGAGAAGTGCCAGCAGTTGAGGACGTTTGTTGTAGTAAAATTCTGCACGTTCAGCAAAAGAGTCCCCAACATTGTCCTCTTCAGCATTTTTCATAGCAAGTAAACTGATCCTCTGCTCCATTTCTGCCATAGGACATTATGTTTCAAGACAACTTAAATTTAAAAGCCAAAGAAATAAGAAAACCACATTTTGTAGGCGCATCATTTTGGCTTAAAATAATAATGATGAATTGCACGAACTGTTGCTTTTAATTGATTACACATATAAGATGTTATTTGACAGTTTTTAGACTATAAATTGCCAATGGATATCAAATAATACATTCAAAAGAAGAAGAGTTCAAAATTTCAAATTCCAGATAATGCCAAAAATATAGACCCAACGGATCCGTGACTTACCAGGGCCAGTAGCTTATTTTGGTTCAAGAAGGGGAGAATAATCTAAGATGGGACCTATGGGACACTATGTAATTGAGATTCAATAAGACAACATAATATTCCAAAATCTGTTGATGTGACATAACATATTTCAAAAACGAACTAATGATATTAGCTATAATTTTATAAAAAAAGTACATAATAACTTCGTTTATTTTTCTTTTAAATTCCCATTTTCTTTTAAATATTTATAAATATTCACGAGGATGGCAATTGAATCTCGGGACAAATTCTATCTTAAAAGTTTTGAATTCCTGTCAAATCGTGGGGCAGAAGGTATGGTTCCCCGCCCTACATTTAAATTCTATTAAAATATTTTGAATGAAACTTATAATTCCAATTCAAAATGTTATAAAGTTGGGACGACTCAAGATAATTTGAATAAAATTCCTGAAAGAGATAACAAAATGGCAAAACCTCCCAACAAATGGAAAAAGAAATGGGTATAAGGTTCACAAATTTCAAAGCCATCACGGGTTTGCATCAATCAGGCAAATAATAAGATGCTCTTTACAGGAAAGTTGTTGAGGACTGCACATCGGTCAGGGATGAAAGAACAGAAAGGTCGCTGTTACGAATATCAAGAAAGAGTTCATACATACACACACTCTCTCACAAGAAAGGTGTGTAGGATGGGGGTTGGTTTCCCTTCTCATAAGTTAGTTTAGGAGTTTCAAATTTTAAAATAAAGTTGGAACAAAATAGCATGGTGAAGGAAATTCAAAGTCGAACCTGGACCGACCAACTTCAGACTCCCTCAGACTAGTCTTACTTCAAACCACCTACCCTTCCAAACTGCAATAAATTTTTCTACATGTATACGCAATCAATCATCAGTCGGTAGGTAAGTTTTTTCCACAGGCTAAGTTTACTCCCTCACCCCTACCCCTCTCTGGTCCTCCTTGGTATTATGGAAAACAAACGAGAAAAACAAAAATTAAAATACAGTAAATTGAGTTTCAAGTCAACAATTAGCATTACCTGCGAGAGAAGAAGATAACGTTGAAGAATGCTTGGTGCTGAGTGTTACACTGTTTCTGTTGCTGCTGAAAGTATCGCAAGATGGAGATGAAGATGTTCGATTGATTGAAACCTCTTCTTCCTCCGGGGCCGCCATTGCTATCTAAACGTTAGCCTGTTAAGCTGCGCAATGCAATCTCCACTCTACTCTTTTCAAGTGCCTCTCCTCACTCAAAGTGCATCAACCACAGGAACACTCGCAGCTGACAACACGGTTTTGTGTTAACCATCCGACAAAAATATGTGCAGAACCACTACTTCAGAACGACCATACAGAAAAAGCAATACATATTTTCCACATATCAGTTAATATTAATTAAAAATTAAGGACAAAGATGAGCAACGCATGATTTAATCATCTGAAGGCACACTAGCATACATATTTAATTCTTGGGAACATCCACTTCAAGACCACATTGCAACACATGTGCCATCATTATCAACACTTTAAAGTATTGTTGTGAAAGACAATTGAAAACTTTATTTTAAACTCTAACATAGAATTTATCTTGCAATCAGAAATTAAGTAATTCGAAAAAATGGTTGGACAAATAAAGATCATTTATGTTGCAATTTTATTGAATGTCAGGAGTAATGATGGTAAGCTTCCAATTAAAAAGGCATGGCCCATAAAGTCCTTGGGGGCAGGCAAGTAGGAAAGCTCAGAATCCAATAAAATCCAATGCAATAAAAGCAGCAAACCGTACAAAAAACCTAACTATTGCATTTAGAATAGAAAAATAATAAACAGTGTAGTATGGGCAACAAATTGGAAAATAATTTTTCGTAAAAGAGTTGGCGCAGATCTCGAAAAGTTTCATCAAAATATAAACAAAGTGCAAATCAAATCACAAAGCCTGTCTCAATATTCATGGTACCAGAAGCTGCGAAAACCGTATTTACTCAAATCCCCAGGCTCATTTTATAATGCTTCCACATTTTGTTTACTTCAATCCTTTCCTAAGGCAATGGATCACCACAACAAAATCTGAGAGCATTTGGAGCTAACCTGTACTTAGGGCTAAAACATGTAAAATATATTCCGAAGATTGAGTAACTACTGCGATTCAATTGAAGTGAGGAGACAGAAGATAAGAGGAGAAGCGCTTTCTTATGATTATTTGGAAGCTAAGGAAAGATGAAAACGGAGAGAGAGAGAGAGAGATCAGCGAGAGAAGACGTTCCGATTATTGGAACCGACATTCTCGTTTTCAGATGGTAATTGCAGAAGATTAAACGCTAGTGCACTCTAAACTACACAGAACTAGCATAAACTTCAAATTACAATGCCAGGAAAGTAAATTTTCACAAACAAATTAAAAGCAAGTCGTATAGAAGACAGGCAACGCTGATGTTTCATCTTCTTAGCAACCAAAGAGGATGAACATCAGTGAAAAACAGTGAACAGAAGAATAGTCTAACAGGTAAACGAATACACAAAAATAACAGTAGATGATTCGATTCATAAGAAAACAAGTAGAGAAGAATCCATGAAAATTACCTACAGCTTGTGAATCAAAATGCGGCAAAGGAAATCCGAGAGAGAGAAATGGAGGTTGAGGGTTTTGATCGAAATTGTATGTTTAAAATTTGAAGAGATTACGCATTTAACGAGGAAAAAAAGAAACGAACCAAAAAGAGAAAGAGAGAGAGAGAGAAAGAGAGAGTAGGGATCAGGTTTTTTTCCATTTGAACGATACTTCACAGTTCACATAATAAAGTGGTTTTCTTCTTTCCCATTACCTTCAATTTTTTT

mRNA sequence

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA

Coding sequence (CDS)

ATGAAAGGAAGTGTGTGTTTCCTCTGCGGTTCTCTCCCATTTCTTCCAAATCCAAACTACAACTCTTTCTCTTCTTCCTCCGATTCCATTTCTAAACGTAGCTTGATTCATGCTCAAACTCATCACCAAGAGATTCGCGTTTGCACCAATCGTACTTGCCGTCGTCAAGGTTCCTTTCACGCTCTCGAAATTCTCAACGCCCTAGCACCTCCCAACATTGTCGTCAATCCCTCCGGTTGTTTAGGAAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGATGGATTCGTCGTCGGCCATTGTGGCACACCTGCTCGGGCTGCCGATCTTATCATTCAATTATCTGGTCAAGACTCAGATTCTGTTGGTATCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAAAACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTCCATCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTCTAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGGGACGCATTTTTAGCTATGGACCATTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAGAAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAA

Protein sequence

MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEKLSAVRTQ*

Homology

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BLAST of CsaV3_1G005120 vs. NCBI nr
Match: XP_004137391.1 (uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharacterized protein LOC101213093 [Cucumis sativus] >KGN63963.1 hypothetical protein Csa_013052 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 7.1e-141
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsaV3_1G005120 vs. NCBI nr
Match: XP_008437609.1 (PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 2.1e-132
Identity = 243/257 (94.55%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDRS+VRLAL
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGD FLAMD FDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsaV3_1G005120 vs. NCBI nr
Match: XP_038894326.1 (uncharacterized protein LOC120082956 [Benincasa hispida])

HSP 1 Score: 448.0 bits (1151), Expect = 5.6e-122
Identity = 233/267 (87.27%), Postives = 244/267 (91.39%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPN-PNY-------NSFSSSSDSISKRSLIHAQ--THHQEIRVCTN 60
           MKGSVCFLC  LPFLPN P++       +S SSSS+SISKR  IHAQ  THHQEIRVCTN
Sbjct: 1   MKGSVCFLCAPLPFLPNQPSFSSSSSSSSSSSSSSNSISKRIPIHAQTHTHHQEIRVCTN 60

Query: 61  RTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAAD 120
           RTCRRQGSFHALEILNALAPP I VN SGCLG+CGAGPNVAVLPDGFVVGHCGTPARAA+
Sbjct: 61  RTCRRQGSFHALEILNALAPPTITVNSSGCLGRCGAGPNVAVLPDGFVVGHCGTPARAAE 120

Query: 121 LIIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIF 180
           +IIQLSG DSDSVG+SKSLEALALRKRAQCELED NFSQA+LLLSQAIDLKPCGGIHIIF
Sbjct: 121 VIIQLSGGDSDSVGVSKSLEALALRKRAQCELEDRNFSQADLLLSQAIDLKPCGGIHIIF 180

Query: 181 KDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEI 240
           KDRSIVRLALGNHSGALEDANEALR+AP YLEAYICQGDA LAM+HFDSAE SYSTALEI
Sbjct: 181 KDRSIVRLALGNHSGALEDANEALRIAPHYLEAYICQGDALLAMNHFDSAETSYSTALEI 240

Query: 241 DPSIRRSKSFKARVAKLQEKLSAVRTQ 258
           DPSIRRSKSFKARVAKLQEKLSAVRTQ
Sbjct: 241 DPSIRRSKSFKARVAKLQEKLSAVRTQ 267

[Close]

BLAST of CsaV3_1G005120 vs. NCBI nr
Match: XP_022923908.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata])

HSP 1 Score: 395.2 bits (1014), Expect = 4.3e-106
Identity = 204/257 (79.38%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNH+GALEDANEALRVAP+Y EAYICQGD FL+MDHFDSAE+SYSTALEI+PSIRRSKSF
Sbjct: 181 GNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIEPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsaV3_1G005120 vs. NCBI nr
Match: XP_023519354.1 (small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 204/257 (79.38%), Postives = 227/257 (88.33%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALAL KRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALWKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNH+GALEDANEALRVAP+Y EAYICQGD FL+MDHFDSAE+SYSTALEIDPSIRRSKSF
Sbjct: 181 GNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot
Match: Q9STH1 (Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08
Identity = 33/105 (31.43%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 135 RKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEAL 194
           + +       G+++ A    ++AI+L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 195 RVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS 240
            + P + + Y   G AF+ +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot
Match: Q96EQ0 (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sapiens OX=9606 GN=SGTB PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.6e-08
Identity = 38/143 (26.57%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 112 IIQLSGQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFK 171
           ++ LS    + VG     +A  L+      +++ N++ A    +QAI+L P   ++  + 
Sbjct: 71  VLPLSNSVPEDVG-----KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVY--YC 130

Query: 172 DRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEID 231
           +R+  +  LG+++ A++D  +A+ +  +Y +AY   G A  A++ F+ A  SY  AL++D
Sbjct: 131 NRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLD 190

Query: 232 PSIRRSKSFKARVAKLQEKLSAV 255
           P    + S+K+ +   ++KL  V
Sbjct: 191 P---ENDSYKSNLKIAEQKLREV 203

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot
Match: Q32LM2 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos taurus OX=9913 GN=SGTA PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           S EA  L+     +++  NF  A     +AI+L P   ++  F +R+     LGN++GA+
Sbjct: 88  SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAV 147

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKL 247
           +D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP     KS   +VA+L
Sbjct: 148 QDCERAICIDPSYSKAYGRMGLALSSLNKHTEAVAYYRKALELDPDNETYKS-NLKVAEL 205

Query: 248 Q 249
           +
Sbjct: 208 R 205

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot
Match: O70593 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus OX=10116 GN=Sgta PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 117 GQDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIV 176
           G D        S EA  L+     +++  NF  A  L  +AI+L P   ++  F +R+  
Sbjct: 77  GPDRTPPSEEDSAEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVY--FCNRAAA 136

Query: 177 RLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRR 236
              LGN+ GA++D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP    
Sbjct: 137 YSKLGNYVGAVQDCERAIGIDPGYSKAYGRMGLALSSLNKHAEAVAYYKKALELDPDNDT 196

Query: 237 SKS-FKARVAKLQE 250
            KS  K    KL+E
Sbjct: 197 YKSNLKIAELKLRE 208

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot
Match: O43765 (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo sapiens OX=9606 GN=SGTA PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-07
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 128 SLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGAL 187
           S EA  L+     +++  NF  A     +AI+L P   ++  F +R+     LGN++GA+
Sbjct: 88  SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVY--FCNRAAAYSKLGNYAGAV 147

Query: 188 EDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS-FKARVAK 247
           +D   A+ + P Y +AY   G A  +++    A   Y  ALE+DP     KS  K    K
Sbjct: 148 QDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 207

Query: 248 LQE 250
           L+E
Sbjct: 208 LRE 208

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL
Match: A0A0A0LQA2 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.4e-141
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH
Sbjct: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS
Sbjct: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL
Match: A0A1S3AUF9 (tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 243/257 (94.55%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF 
Sbjct: 1   MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFL 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
           ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+GHCGTPARAADLIIQLSG+DS
Sbjct: 61  ALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSGRDS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDRS+VRLAL
Sbjct: 121 DSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRSVVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNHSGALEDANEALRVAPQYLEAYICQGD FLAMD FDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNHSGALEDANEALRVAPQYLEAYICQGDVFLAMDKFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKLSAVRTQ
Sbjct: 241 KARVAKLQEKLSAVRTQ 257

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL
Match: A0A6J1EAV3 (small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431489 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106
Identity = 204/257 (79.38%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSISLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L+ALAPP I VNPSGCLGKCGAGPNVAVLPDGFVVGHC TPARAA++I+QLSG  S
Sbjct: 61  TLETLSALAPPTITVNPSGCLGKCGAGPNVAVLPDGFVVGHCATPARAAEVIMQLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GNH+GALEDANEALRVAP+Y EAYICQGD FL+MDHFDSAE+SYSTALEI+PSIRRSKSF
Sbjct: 181 GNHAGALEDANEALRVAPRYPEAYICQGDVFLSMDHFDSAEMSYSTALEIEPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL
Match: A0A6J1KQA5 (uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.7e-105
Identity = 203/257 (78.99%), Postives = 225/257 (87.55%), Query Frame = 0


Query: 1   MKGSVCFLCGSLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSFH 60
           M  ++C LC  +P    PN  SFSS+S S++    I AQ  +QEIRVCTNRTCRRQGSF 
Sbjct: 1   MTATLCLLC--IPLRFPPNRTSFSSTSVSLTP---IRAQ--NQEIRVCTNRTCRRQGSFQ 60

Query: 61  ALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQDS 120
            LE L ALAPP I VNPSGCLGKCGAGPNVAV PDGFVVGHC TPARAA++I++LSG  S
Sbjct: 61  TLETLCALAPPTITVNPSGCLGKCGAGPNVAVFPDGFVVGHCATPARAAEVIMRLSGGVS 120

Query: 121 DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLAL 180
           DS+G+SKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+LKPCGGIHIIFKDRSIVRLAL
Sbjct: 121 DSLGVSKSLEALALRKRAECEVEDGNFSQADLLLSKAIELKPCGGIHIIFKDRSIVRLAL 180

Query: 181 GNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSF 240
           GN++ ALEDANEALRVAPQY EAYICQGD FL+MDHFDSAEISYSTALEIDPSIRRSKSF
Sbjct: 181 GNYAAALEDANEALRVAPQYPEAYICQGDVFLSMDHFDSAEISYSTALEIDPSIRRSKSF 240

Query: 241 KARVAKLQEKLSAVRTQ 258
           KARVAKLQEKL+AVRTQ
Sbjct: 241 KARVAKLQEKLNAVRTQ 250

[Close]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL
Match: A0A6J1C6P2 (sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 195/257 (75.88%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 1   MKGSVCFLCG-SLPFLPNPNYNSFSSSSDSISKRSLIHAQTHHQEIRVCTNRTCRRQGSF 60
           MK +  F+C    PF   PN+ SFS+S  S  KRS I    H+QEIRVCTNRTCRRQGSF
Sbjct: 1   MKATAGFVCDPHAPFRLLPNHTSFSTSI-SRYKRSPIRFHAHNQEIRVCTNRTCRRQGSF 60

Query: 61  HALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHCGTPARAADLIIQLSGQD 120
             LE LN LAPP I VN  GCLGKCGAGPNVAVLPDGFVVGHCGTPARAA+L++ LSG  
Sbjct: 61  QTLETLNGLAPPTITVNSCGCLGKCGAGPNVAVLPDGFVVGHCGTPARAAELMMGLSGSG 120

Query: 121 S--DSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVR 180
              D + +SKSLEALALRKRA+ E+E+G+FSQA+L LSQAI+LKPCGGIHIIFKDRSIVR
Sbjct: 121 GGYDPLSVSKSLEALALRKRAETEMEEGDFSQADLHLSQAIELKPCGGIHIIFKDRSIVR 180

Query: 181 LALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRS 240
           LA GN+SGALEDANEAL+VAPQY E YICQGDAF AMDHFDSAE SYSTALEIDPSIRRS
Sbjct: 181 LAQGNYSGALEDANEALKVAPQYTEGYICQGDAFFAMDHFDSAETSYSTALEIDPSIRRS 240

Query: 241 KSFKARVAKLQEKLSAV 255
           KSFKARV KLQEKLSAV
Sbjct: 241 KSFKARVDKLQEKLSAV 256

[Close]

BLAST of CsaV3_1G005120 vs. TAIR 10
Match: AT3G17670.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-65
Identity = 119/212 (56.13%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLG+CG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 103 GTPARAADLIIQLSG---QDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAID 162
            TP+RAA+++  L G   + S S  ++ +L ALAL   A  +++ GNFS+AE LL+QA++
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 163 LKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDS 222
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 223 AEISYSTALEIDPSIRRSKSFKARVAKLQEKL 252
           AE SY T LEIDPS+RRSK FKAR+AKLQ+K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of CsaV3_1G005120 vs. TAIR 10
Match: AT3G17670.2 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.9e-65
Identity = 119/212 (56.13%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 43  QEIRVCTNRTCRRQGSFHALEILNALAPPNIVVNPSGCLGKCGAGPNVAVLPDGFVVGHC 102
           +EIRVCTNRTCRRQGSF  LE L ALAPP + V    CLG+CG+GPN+  LP G ++ HC
Sbjct: 19  KEIRVCTNRTCRRQGSFQILETLTALAPPELRVTHCACLGRCGSGPNLVALPQGLILRHC 78

Query: 103 GTPARAADLIIQLSG---QDSDSVGISKSLEALALRKRAQCELEDGNFSQAELLLSQAID 162
            TP+RAA+++  L G   + S S  ++ +L ALAL   A  +++ GNFS+AE LL+QA++
Sbjct: 79  ATPSRAAEILFSLCGDGREASSSSAVTDALTALALTNNALSQIDAGNFSEAEALLTQALE 138

Query: 163 LKPCGGIHIIFKDRSIVRLALGNHSGALEDANEALRVAPQYLEAYICQGDAFLAMDHFDS 222
           LKP GG+H IFK RS+ +L + ++SGALED ++AL +AP Y E YICQGD ++A   +D 
Sbjct: 139 LKPYGGLHRIFKHRSVAKLGMLDYSGALEDISQALALAPNYSEPYICQGDVYVAKGQYDL 198

Query: 223 AEISYSTALEIDPSIRRSKSFKARVAKLQEKL 252
           AE SY T LEIDPS+RRSK FKAR+AKLQ+K+
Sbjct: 199 AEKSYLTCLEIDPSLRRSKPFKARIAKLQQKV 230

[Close]

BLAST of CsaV3_1G005120 vs. TAIR 10
Match: AT4G12400.1 (stress-inducible protein, putative )

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09
Identity = 33/105 (31.43%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 135 RKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEAL 194
           + +       G+++ A    ++AI+L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 195 RVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS 240
            + P + + Y   G AF+ +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of CsaV3_1G005120 vs. TAIR 10
Match: AT4G12400.2 (stress-inducible protein, putative )

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-09
Identity = 33/105 (31.43%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 135 RKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANEAL 194
           + +       G+++ A    ++AI+L P    HI++ +RS    +L  +  AL DA + +
Sbjct: 6   KSKGNAAFSSGDYATAITHFTEAINLSPTN--HILYSNRSASYASLHRYEEALSDAKKTI 65

Query: 195 RVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKS 240
            + P + + Y   G AF+ +  FD A  SY   LEIDPS    KS
Sbjct: 66  ELKPDWSKGYSRLGAAFIGLSKFDEAVDSYKKGLEIDPSNEMLKS 108

[Close]

BLAST of CsaV3_1G005120 vs. TAIR 10
Match: AT1G04190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.9e-06
Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 0


Query: 133 ALRKRAQCELEDGNFSQAELLLSQAIDLKPCGGIHIIFKDRSIVRLALGNHSGALEDANE 192
           +L+++     + GNF +A  L +QAI L P      ++ +R+   L+L   S AL DA  
Sbjct: 17  SLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNA--TLYSNRAAAFLSLVKLSKALADAET 76

Query: 193 ALRVAPQYLEAYICQGDAFLAMDHFDSAEISYSTALEIDPSIRRSKSFKARVAKLQEK 251
            +++ PQ+ + Y  +G    AM+ ++ A  ++  AL+ +P          R+ +LQ++
Sbjct: 77  TIKLNPQWEKGYFRKGCVLEAMEKYEDALAAFEMALQYNPQSTEVSRKIKRLGQLQKE 132

The following BLAST results are available for this feature:

BLAST of CsaV3_1G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137391.1	7.1e-141	100.00	uncharacterized protein LOC101213093 [Cucumis sativus] >XP_031740366.1 uncharact...	[more]
XP_008437609.1	2.1e-132	94.55	PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]	[more]
XP_038894326.1	5.6e-122	87.27	uncharacterized protein LOC120082956 [Benincasa hispida]	[more]
XP_022923908.1	4.3e-106	79.38	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
XP_023519354.1	1.3e-105	79.38	small glutamine-rich tetratricopeptide repeat-containing protein beta [Cucurbita...	[more]

BLAST of CsaV3_1G005120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STH1	4.3e-08	31.43	Hsp70-Hsp90 organizing protein 3 OS=Arabidopsis thaliana OX=3702 GN=HOP3 PE=2 SV...	[more]
Q96EQ0	9.6e-08	26.57	Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Homo sa...	[more]
Q32LM2	2.8e-07	31.40	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Bos ta...	[more]
O70593	2.8e-07	31.34	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus...	[more]
O43765	3.7e-07	31.71	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Homo s...	[more]

BLAST of CsaV3_1G005120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQA2	3.4e-141	100.00	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031840 ...	[more]
A0A1S3AUF9	1.0e-132	94.55	tetratricopeptide repeat protein 1 OS=Cucumis melo OX=3656 GN=LOC103482942 PE=4 ...	[more]
A0A6J1EAV3	2.1e-106	79.38	small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1...	[more]
A0A6J1KQA5	6.7e-105	78.99	uncharacterized protein LOC111495518 OS=Cucurbita maxima OX=3661 GN=LOC111495518...	[more]
A0A6J1C6P2	1.2e-98	75.88	sperm-associated antigen 1 OS=Momordica charantia OX=3673 GN=LOC111008751 PE=4 S...	[more]

BLAST of CsaV3_1G005120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17670.1	3.9e-65	56.13	tetratricopeptide repeat (TPR)-containing protein	[more]
AT3G17670.2	3.9e-65	56.13	tetratricopeptide repeat (TPR)-containing protein	[more]
AT4G12400.1	3.1e-09	31.43	stress-inducible protein, putative	[more]
AT4G12400.2	3.1e-09	31.43	stress-inducible protein, putative	[more]
AT1G04190.1	1.9e-06	27.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 167..200 e-value: 20.0 score: 12.3 coord: 131..164 e-value: 59.0 score: 8.2 coord: 201..234 e-value: 0.013 score: 24.7
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 201..234 score: 9.3814
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 42..122 e-value: 1.7E-7 score: 33.3
None	No IPR available	PANTHER	PTHR47682	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN	coord: 23..256
None	No IPR available	CDD	cd02980	TRX_Fd_family	coord: 45..112 e-value: 8.74374E-13 score: 60.3336
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 126..257 e-value: 4.8E-19 score: 70.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 131..250
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 45..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G005120.1	CsaV3_1G005120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding