CsaV3_1G004850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G004850
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 3156240 .. 3156845 (+)
RNA-Seq ExpressionCsaV3_1G004850
SyntenyCsaV3_1G004850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGAAAAGCAAAGGTGCATAAATAAGGCCATGTAGAGCGTCCCACTCCGGTGGAATCGCCGATCAATAACAGATTGTTAAATTTTGATCGAAAATGGGAGGCGAGAGTTGGTAGTAAAAGCAATAGAAGGCGTTGTGTTGGATTGTTCCGTCCAGTATCTCAGGAATCCAAAAGGACTCAAGATATAGTGGAGTTGAATTCATTCGGAGGGCAGCTTAAGGAAATGTCTAAGCAAAATGAAACGTTAAGAGAAACCCTAAAACAAGCGGGATCTGAAGATTTAGTTGTTGGGCAATAATAATAATAGGGGTGTGTGGATTTAAACAAATAGAAAGAGGAAAAAGGAGGGATAAAAAGAAATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCCCCATTATTTTAA

mRNA sequence

ATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCCCCATTATTTTAA

Coding sequence (CDS)

ATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCCCCATTATTTTAA

Protein sequence

MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIELVDLRPVRYFSRHSLFFSPLF*
Homology
[Close]
BLAST of CsaV3_1G004850 vs. NCBI nr
Match: KGN63932.1 (hypothetical protein Csa_013364 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 6.9e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60
          MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL
Sbjct: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60

Query: 61 VDLRPVRYFSRHSLFFSPLF 81
          VDLRPVRYFSRHSLFFSPLF
Sbjct: 61 VDLRPVRYFSRHSLFFSPLF 80

[Close]
BLAST of CsaV3_1G004850 vs. ExPASy TrEMBL
Match: A0A0A0LT29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029590 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.3e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60
          MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL
Sbjct: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60

Query: 61 VDLRPVRYFSRHSLFFSPLF 81
          VDLRPVRYFSRHSLFFSPLF
Sbjct: 61 VDLRPVRYFSRHSLFFSPLF 80

The following BLAST results are available for this feature:
BLAST of CsaV3_1G004850 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63932.16.9e-34100.00hypothetical protein Csa_013364 [Cucumis sativus][more]
BLAST of CsaV3_1G004850 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G004850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT293.3e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G029590 PE=4 SV=1[more]
BLAST of CsaV3_1G004850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G004850.1CsaV3_1G004850.1mRNA