CsaV3_1G004460 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAGTTCGAAGGCGGTAAAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCGGCGCTTGAAACAATTGCTGAAACTTCGTGCACATAGAAGGAAAACAGAAGGGGAATTCGGAATAATGGGGAAAAATGTATGAGATTAATTTACATTTACGAATAATTGGGTAGCGTTTTTGGTTGGATCAATGGTAGTTGATAGAGATGAGATGAGTGGATAAATAAACAGAGATCTTGAAAGTTTGTTTATTCTTATACATTATTCTTTTTCTCTTTCTTAGGCTTATGATGAACACATTCTTCTTATTGATTGATTTATTTATGTAGAACAACACGTTAAGTGCTTCCAATCTTCCCAAATTATTTTCTGAAGTGGGTTGTGAGAAAAAAGAAACAAAGACGATCTCCGTAGATGCACTAACTATTACCTATCTAAATATTATTATCTAACTCACTTTCTTCTATTGTTTTTTTCGTTATTTAAAAGAAGTAATTAAAAAAAATATCATTTTAAAAAATGGTACAATAAATTAAAATATTTATAAATTATAACAAAAACATTATCTGATAAAATATTGTTAAATTTATTATTTTTGTCCATTACCTATTAAAAAAACTTATTTTATATAGATTATTTATTTATTAACTTAAAATACTTTAAATTTTAAACTTATCTATGAAAACTAAAACGTTATGAATTATGATATTTATAAGTTTGAATATATCTTTAATGATATTAGAAATTCGAGTAGGATTGAATCAACCCATATTTTAAAAAATATCATCAATAAAGGGTTGATTGGATAGTATCGATTGTTGGATTATTTGAACACGTCTAATAAACATTAGCCATCACGAGAATTATTTCCACCAATTTTCTTTTCTTTACAAAAAAACGTTGTCCTCCCATTTCTTAAAAGAAATTAAGAAGAAGATAATTAAAAGAAAAAAATGAAATTGCCACGTGGTAGCATTATATTGGATATATTAGTAGTGTAAAAATAAACCAAATAAATGAAAGATGTAAGGAATATAATGGGGGAAGTTTAGTTTACAAATATACCAATGTCAAAGTAAAATTTAGGAAACAACATTTGATAAAAGCAAAAATTTATAGTGGGAGATCCCAAAAACTAAAGGTAGATTTTAATTTTTCATTAATAAAACTTTGAGATTTATGTTTTCCTTTTTAAATACTACTTTCTTTGTTTTTTGGGTTAGTTTCTATTTGGTTTTGAGGTTTCAAAAACCAAAATTCATCAGTTTCTTTTTAGTTTAATTAAGTGTTTTTTTCCTATATTTTTTAAATAGTTTTATTTTTTTATACATAACAATTCCCCTCTCAAAATGTTAGACAATAAAATCTATTTGGTAACCATTTCAAGTTTAGTTTTTAAAATTTAGCATATTTTCTATCCATTTTTAAAAATAATTTACATATTTATTCAACCATTTTTAGCCAAATTTCAAAGAAAAACAAATTATTTATTTAAAACTTTTTTTTTTCAATTTCAAGATTTGACTTATATTTTTTAAACAATGGAAGAAAGTAGATAATTGTTCACACGAGATTTCAAGAAAATGTATTTCGTGGAATTGAACTTTGTATATTGATAAATATTGTGAATATAGTCTCTAGTATTTACTCCTTTGATGTTTTTTCTTGAATACAAGTTAAAAATTTATAACTTCTTGGTCTTAAAGACATCGTAATTGCAAGTTGATTTGAACATGATCATTTGGAATCCAATAAAATTTTAATCTTCAAAGTCTCCGATATTTCATAAGATGTTAATCTTGAGATTGATACAAACTTGCACTTCTTGAGAGCTTGTACAAGTTTAAATTTTTAATTCTTAAGAGCTTTGAATATTTCAGCGTTTTAATTTGAGGTCTATATTTATATAGAATTTTCATGAGCTTTAGTTAACTTGGATCCATTTGCTTGTTGGGCTTGTACTTGAGCTTGGGTCAATTTGTCTGTTAGACTTGGATTTGGACCCAATTTTCTATTCGATTTGGACATGGGCTTGGAACAATTATTTATTTGGTCCAATTTTTACATTGGAGGCTTGAATTTGGTTGAATACGAGAAAATTTAATTATTCAAACCCAATCAATTTATAATTATCACAATGTTTGTCGTGATGACGTGGCAAAATGTAATTGATTGAAATTTATTGCTCAAATAATAAAAGTCGAAATCAATTTAGAGGTGAAAAATAATGTCCATTTGCTTAATTTTAAAACACAAAAAAATTGTTAGCAAAGAGTCTTAGTTTTAAGTTTTTATTTTGGTTTTAATTTGTTGGAAGAATCAGACTCACAAGGACTAAATGTGTAGTGTTTGAAGCTTAGAAACCAAATAAAAATGTGTAGCGTTTGAAACTTAGGAACCAAATAAAAATTAAACTACAATTTGATGGACTAATAAGATATTTTTTTCTAATGTTTTTATCCTCTCAATTTGTGTTTACAAATTGTTAAGATTAAGTAGTCGAATTATATTTTTATTACATGGAAAAATACATTTGGTACCTAAATTTTAAGATTCACACTTTTGCTTAATGAAATACTCACTTTTATCGTGAGTGTTAATACTACTAATTGATTTAAATTAATTATTGAGTGAAAATTTAGAATTCATTTTAATACTAACCAACAACGAAAAATAAAACTTAAGACGAAAGTGTAAAATTGCAACACCAATACAGTGAAATTAAACTTAAAACTTAAGACGGATAGTGTAACACTTTAAAACCTATTAACAAAGATGAAAACGAGATGTATAACTTGAATACCAACTACATACTTCGGTGTAATAAAAAGATAATGAAATTATTAAATGTTAAACACAAATTAGGGAATAAAAGAACGTGAAATTCAAAGATTTTGAATGAAATTAATATATGAAATAGATCCAACCACCAAATGTTTACAAACTACAACGACTATATGTGAGATATACCCCTTCTTGTGTATTGTGGAATGAAACGAATCCTCTGATCATTAGTTTAGACATTTTTCAGTAAAATATATGAAGGCTATAATTCAAAAGTGACCTATTCTTTTAGAAGTGATATTTTTGTACATCTTAATATATATATATTTTAATGAATTTACAAGCTTGGAAGATTGAGCGTATCCATTTTATTTGAAAATATCCTTAAACTTAAAAAGAAAAAAGTTATCGTTGGTATATGGATAAAAATTGTTGATTCCTTCTTTATAAAATATTTATAAACTTTGAAGAGTTGGATTCATACTCTTAGATAGGGGTAAGCATGATTGACAAAAGAAATGGACCGATCGGTCGAGGTCGTTTTGTAAAGTTTCAAATCGATAATTTCTAAAAAGTTTTCAAGTGTTATCGACCCTTAACCATCAATGTCGATTTGAATATTTACTAAACCGACTATGGTCGGTTCGATGACAGTCTTGTTTTAAAAAAACCGACTACGACCAATGATCACCCCTACTTTTAGAAATAAAAGAATTTTCATTAGAAATGTAGAATAACCAAATACAAATACAAATACATTCGACAAAGGAATATCACCTCCTATCTCTACCAATTTAGTAATGCAACATATTTTTCCTTCCACTAGTTGTCCTAAGTGTTTTAATTCAAAACAACTTTTGACTTATTATCGCACACTTAACTATTAATTATTAATGCACAACTTTATTAAAGCACACTTAACTATTAACGTACTAACTTTACTAAAACACTCAAATCTTTGTAGAAAAACAAGAATACTTTTTCATTCACTAATAATTTTCATGTGTATGAAATACATTTTGATATTAAGAAAGAAAACGCAAGGATGATGAGCTTAGAATCCATTTTCAACAATTTATTTCAAATTCATACACTAATATTCTTAGAAATTCTGAAATGTATTTTTCATTCTAAAAAAAAGAAAAGAAAAGAAAGCATTGAAGTGTAATCCATTTTCAATTTCAAGTGTATAATTTAAATTTAATTAATTTGAGATCAAAATAAAGAGTTTGAGAATTTGTCAAAATGATTTTTTTGTATATTTTAATTGGTTTTTATAGAGAAATCAATAATACAAATGTATGTATTTTTTTTCTTGTAAAAGGGTAATCAATTCCTATTCAAAACTAACTCCAAGTTGAAACGAAGATTAATGGAAATCAGGGAGCCGAGTGTTAGAAAATTTTGTATCACAAATCGAATCCACAAAACGTTGTTCAATCCACGTATTTTGATTACATTATACAGATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA ATGGGGAATTCAGCTTCTTGTGCTCCTTCAATGGCCTCCAATGGCGCCCCAAAGGTTTTATCCTTAGATGGAAGATTACAGAGCTTCTCAAAGCCAGTGACGGCCGCCGAACTAATGATCGAGCATTCCGGTAAATTCCTATGCGATTCCAGCGATCTTAAAGTCGGCCATCGGATTCAAGGTCTATTACCGGATGAAGATCTGGAATGGCGGCGATTATACTTTCTTCTTCCGATGGATCTTCTTTACTCTGTTCTAACACTGGAAGAAATGAGTTCTCTGACTTTCATCGCTACAAAGGCTTTGAAACAGGGAAATTCGAGCGGATTTGGGAGGATTTTTCCTGTTTTAATCAGTGAGTTTTGTAATTCTCCGGCGGATGTGAAGGGATTGAAATTGGAAGATGATGATGATCGAGAGAATCAAAATTTAGATGTTAACGACGATGCTGGATATGAAGCAGAAGAGGAATTTTACAAAATCTACTCGAAGGTGGGAAGGGAAAAAGAGATAATTATTATTCATACAACAGAAGAAGGTGAGAGCCCTAGGCCGTCGGAGCACTCGCAAGTCCGACATCGTATCGTCAATCGGAAGGCTTCTTCGACGATGGAAACAAATGCCTCCACAAGTAGCGGCCGCTGGCCATATCCACCAACGTCCAGAACCCCGAAGACACCTGTTCAAACAAACCACCACAATAATTCCATTCAGACACAAACAAAGAAAAAGAAAATGCAAGATTCCGGTGAAGAACAATTAGAAGAACCTTGGAGCAGGAGGACGAATCGGAGGAATCGAATTCGTTGGAGTTATCGTCTGAATTATCGCCGGCCACGAAATCTTGAGGCTGAGATTTGA MGNSASCAPSMASNGAPKVLSLDGRLQSFSKPVTAAELMIEHSGKFLCDSSDLKVGHRIQGLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISEFCNSPADVKGLKLEDDDDRENQNLDVNDDAGYEAEEEFYKIYSKVGREKEIIIIHTTEEGESPRPSEHSQVRHRIVNRKASSTMETNASTSSGRWPYPPTSRTPKTPVQTNHHNNSIQTQTKKKKMQDSGEEQLEEPWSRRTNRRNRIRWSYRLNYRRPRNLEAEI* Homology
BLAST of CsaV3_1G004460 vs. NCBI nr
Match: KAE8652475.1 (hypothetical protein Csa_013772 [Cucumis sativus]) HSP 1 Score: 558.9 bits (1439), Expect = 2.5e-155 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_004137354.1 (uncharacterized protein LOC101203132 [Cucumis sativus]) HSP 1 Score: 281.2 bits (718), Expect = 1.0e-71 Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_008453692.1 (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo] >KAA0058149.1 DUF4228 domain protein [Cucumis melo var. makuwa] >TYK29749.1 DUF4228 domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 263.5 bits (672), Expect = 2.2e-66 Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_038879989.1 (uncharacterized protein LOC120071684 [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 1.2e-61 Identity = 128/143 (89.51%), Postives = 133/143 (93.01%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. NCBI nr
Match: XP_022135244.1 (uncharacterized protein LOC111007254 [Momordica charantia]) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-55 Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. ExPASy TrEMBL
Match: A0A0A0LSX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 4.9e-72 Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. ExPASy TrEMBL
Match: A0A5D3E1W3 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46571G00010 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. ExPASy TrEMBL
Match: A0A1S3BY23 (uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 136/143 (95.10%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. ExPASy TrEMBL
Match: A0A6J1C0W6 (uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007254 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.9e-56 Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54 Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.2 bits (230), Expect = 3.6e-19 Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-09 Identity = 33/107 (30.84%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 7.6e-09 Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 6.4e-08 Identity = 30/92 (32.61%), Postives = 49/92 (53.26%), Query Frame = 0
BLAST of CsaV3_1G004460 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 9.3e-07 Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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