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CsaV3_1G004290 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACCATTGAAAAAGAGAAAAATGAGGAGAAATTGTGAGCCGTCGGATCTTCTCCCCTCATTATTCTTCAATATTTCTCCCTATAAATACCCAATTTTCCGATCCTATTTCTTCATTACAAAAATCGAAGTTTAACCCATTCCGTTTTCCTCTCTATCAAGTTTTAACCTCCAAAAATGGCCACCGACCCCAACCCGATTCCCACCTCAAAATCCGAAGCCGACCAAATCGCCAAGCAGAACCCATCCGTCTTACTCCAGGACGACGAAGAACTCCGCAAGGTTTTCGAACGCTTCGATGCGAATGGCGACGGTAAGATCTCCATCTCCGAGCTCGATGCCGTTCTCACTTCCTTAACGTTAAAATCCGCCATCCCCTTAGAAGAGCTTCGATCTGTCATGGATGATCTCGACTCTGATAAGGACGGGTATATCAACATCGATGAATTCGCCGCCTTCTGTAAGAAACCGATGGCCTCCGACGAAGCTGGAGCAGCGGAGCTTCGTGACGCTTTCGACCTCTACGATCAGGACCGTAACGGCCTTATTTCTCAGTCCGAGCTCCATCTCGTTCTCAATCGCCTCGGAATCAGTTGTTCTAAGGAAGACTGTCAAAAAATGATCAACTCCGTTGATTCGGATGGAGACGGAAATGTGAATTTCGAAGAGTTTAGGAAGATGATGACGGATAATTCCAAATCGAAGGCCGCTCAACAGAACGGAACTGCCGCGGCGGCACCCTAGCCCTAACTCTAGGTTTTGGTAAGTTGTTTAGTAATTAGCCGCGTGAGAGAGAGGTAACGAAGTCGATTTCTATCCTTCGTTCCTTTTCCATTTCGGTTTCTTTTTTCTTCTTTTTAAATTTTCTCTGTGTTCTATCCTTAATCTGAATCCAATCCAACTGTTTTTGTTTTCTTATTTTGTCGAAATGTAACAAAAAAAAAAATTCGGATGTGCTTCTGTTGATCATCCGCCATTAATGCAGATCTTTAATTTAAACTCTTTCTATCCGATTGAAGATTGAAGAGAAACTTTTCCGGAAAATCGATTGGTATTTCCGGATTCATAGTGTGCATTGCTGTTGAGTGCTGAGTACATTTCATCCCTATTTTTGTTTCTTTTTTTCCGTAAAATTAGAACACTAATAAATGAAATAAAACAAAATAAAAAATAGAGTGGGATTTTTTTTTCGAATATAAAAAGGGTAAAATTGAATATTCCAAACTTATCCCGTGATCTTAAACTTGTCACTATTTTTATTGGGCCACGTAGGAGTGCAGTAAAAAACCAAATATTCAAAATTTGATTTTTCTTTATATGTATTGATTTTGTATTTGAAAGGGTATTGAATTGTTTGGATTCACTTTTTTATTTGAAAAATAGAAAATAAGTCCAAATTGAATTGAATCTATAGTATGATTGAAGTATTGTGTTAGGTTGTTGATTTATTATATTATGTTAGATTATATAGTTAAAAATAGTATCTAATGGATGAAGTTTAATTTTGTTTGGGTTAAATTGAAACTTGAAATTGATTTTTATGCAATTTAGTTTAAGACATTAAACTAATTCTAAAACACAATCGCTTTATTTAAAAAAAATTATATACATCGTTTGTACTTAATTATTATACAAATTAATTTAATGTATGTAATTTTGTAAGACTTTTATTTTCAGTATTATGCATGGATGTATTTTTTTTTGGTTCAGTGCAGTTTTAGCTTCAAAACGAACGAATACTCCTAATTTTATGGTTTAACGGATAAAATTGTAGGTTATAATAGTTGGAAAATGAAATGGGTTAATCCCCGTTCATCAACCTCAAGTTGATGCTCTAAACATCTATTTAGTGGTTAAAATAATCAACTCTTTATGCAACCAACCAACCAACTCTTAGTAACTCTAATAGTTATAATTCCTACTTATAGAGACTATCTTTGATAGCTACCTCTAACAATGTATAATAGTTTTCTTTTATAGTAATTTGACATTCATAAAAACACTTTGAGTGTTGATTTTATCATTCATCGAACATATGTTAGATTTTCTAT ATGGCCACCGACCCCAACCCGATTCCCACCTCAAAATCCGAAGCCGACCAAATCGCCAAGCAGAACCCATCCGTCTTACTCCAGGACGACGAAGAACTCCGCAAGGTTTTCGAACGCTTCGATGCGAATGGCGACGGTAAGATCTCCATCTCCGAGCTCGATGCCGTTCTCACTTCCTTAACGTTAAAATCCGCCATCCCCTTAGAAGAGCTTCGATCTGTCATGGATGATCTCGACTCTGATAAGGACGGGTATATCAACATCGATGAATTCGCCGCCTTCTGTAAGAAACCGATGGCCTCCGACGAAGCTGGAGCAGCGGAGCTTCGTGACGCTTTCGACCTCTACGATCAGGACCGTAACGGCCTTATTTCTCAGTCCGAGCTCCATCTCGTTCTCAATCGCCTCGGAATCAGTTGTTCTAAGGAAGACTGTCAAAAAATGATCAACTCCGTTGATTCGGATGGAGACGGAAATGTGAATTTCGAAGAGTTTAGGAAGATGATGACGGATAATTCCAAATCGAAGGCCGCTCAACAGAACGGAACTGCCGCGGCGGCACCCTAG ATGGCCACCGACCCCAACCCGATTCCCACCTCAAAATCCGAAGCCGACCAAATCGCCAAGCAGAACCCATCCGTCTTACTCCAGGACGACGAAGAACTCCGCAAGGTTTTCGAACGCTTCGATGCGAATGGCGACGGTAAGATCTCCATCTCCGAGCTCGATGCCGTTCTCACTTCCTTAACGTTAAAATCCGCCATCCCCTTAGAAGAGCTTCGATCTGTCATGGATGATCTCGACTCTGATAAGGACGGGTATATCAACATCGATGAATTCGCCGCCTTCTGTAAGAAACCGATGGCCTCCGACGAAGCTGGAGCAGCGGAGCTTCGTGACGCTTTCGACCTCTACGATCAGGACCGTAACGGCCTTATTTCTCAGTCCGAGCTCCATCTCGTTCTCAATCGCCTCGGAATCAGTTGTTCTAAGGAAGACTGTCAAAAAATGATCAACTCCGTTGATTCGGATGGAGACGGAAATGTGAATTTCGAAGAGTTTAGGAAGATGATGACGGATAATTCCAAATCGAAGGCCGCTCAACAGAACGGAACTGCCGCGGCGGCACCCTAG MATDPNPIPTSKSEADQIAKQNPSVLLQDDEELRKVFERFDANGDGKISISELDAVLTSLTLKSAIPLEELRSVMDDLDSDKDGYINIDEFAAFCKKPMASDEAGAAELRDAFDLYDQDRNGLISQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEEFRKMMTDNSKSKAAQQNGTAAAAP* Homology
BLAST of CsaV3_1G004290 vs. NCBI nr
Match: XP_004137340.1 (probable calcium-binding protein CML27 [Cucumis sativus] >KGN63870.1 hypothetical protein Csa_013908 [Cucumis sativus]) HSP 1 Score: 364.4 bits (934), Expect = 6.0e-97 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. NCBI nr
Match: XP_008453475.1 (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo] >KAA0058132.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK28486.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]) HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92 Identity = 179/188 (95.21%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. NCBI nr
Match: XP_038878467.1 (probable calcium-binding protein CML27 [Benincasa hispida]) HSP 1 Score: 311.2 bits (796), Expect = 6.0e-81 Identity = 161/188 (85.64%), Postives = 172/188 (91.49%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. NCBI nr
Match: XP_023529417.1 (probable calcium-binding protein CML27 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72 Identity = 143/188 (76.06%), Postives = 166/188 (88.30%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. NCBI nr
Match: XP_022933917.1 (probable calcium-binding protein CML27 [Cucurbita moschata] >KAG7021647.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 282.3 bits (721), Expect = 3.0e-72 Identity = 142/188 (75.53%), Postives = 166/188 (88.30%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy Swiss-Prot
Match: Q9LE22 (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana OX=3702 GN=CML27 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 3.0e-43 Identity = 93/170 (54.71%), Postives = 125/170 (73.53%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy Swiss-Prot
Match: Q9C9U8 (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana OX=3702 GN=CML26 PE=1 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.0e-40 Identity = 87/160 (54.37%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy Swiss-Prot
Match: Q9M7R0 (Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.9e-37 Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy Swiss-Prot
Match: Q9C8Y1 (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana OX=3702 GN=CML23 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.3e-33 Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.1e-32 Identity = 76/149 (51.01%), Postives = 100/149 (67.11%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy TrEMBL
Match: A0A0A0LPP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025020 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 2.9e-97 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy TrEMBL
Match: A0A5D3DXJ8 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001210 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 7.4e-93 Identity = 179/188 (95.21%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy TrEMBL
Match: A0A1S3BX51 (probable calcium-binding protein CML27 OS=Cucumis melo OX=3656 GN=LOC103494178 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 7.4e-93 Identity = 179/188 (95.21%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy TrEMBL
Match: A0A6J1F164 (probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC111441185 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.4e-72 Identity = 142/188 (75.53%), Postives = 166/188 (88.30%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. ExPASy TrEMBL
Match: A0A6J1E0A3 (probable calcium-binding protein CML27 OS=Cucurbita moschata OX=3662 GN=LOC111429663 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71 Identity = 145/188 (77.13%), Postives = 164/188 (87.23%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-44 Identity = 93/170 (54.71%), Postives = 125/170 (73.53%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 176.4 bits (446), Expect = 2.2e-44 Identity = 93/170 (54.71%), Postives = 125/170 (73.53%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 165.2 bits (417), Expect = 5.0e-41 Identity = 87/160 (54.37%), Postives = 112/160 (70.00%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 142.1 bits (357), Expect = 4.5e-34 Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 0
BLAST of CsaV3_1G004290 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family ) HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30 Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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