CsaV3_1G003460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G003460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionF-box protein
Locationchr1: 2164493 .. 2165695 (-)
RNA-Seq ExpressionCsaV3_1G003460
SyntenyCsaV3_1G003460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

mRNA sequence

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

Coding sequence (CDS)

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

Protein sequence

MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ*
Homology
BLAST of CsaV3_1G003460 vs. NCBI nr
Match: XP_004138336.1 (uncharacterized protein LOC101222225 [Cucumis sativus] >KGN63784.1 hypothetical protein Csa_014008 [Cucumis sativus])

HSP 1 Score: 839.7 bits (2168), Expect = 1.0e-239
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240
           GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240

Query: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300
           VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT
Sbjct: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300

Query: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360
           YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF
Sbjct: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360

Query: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ
Sbjct: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

BLAST of CsaV3_1G003460 vs. NCBI nr
Match: KGN63785.1 (hypothetical protein Csa_013046 [Cucumis sativus])

HSP 1 Score: 592.0 bits (1525), Expect = 3.7e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240

Query: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300

Query: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360

Query: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 400

BLAST of CsaV3_1G003460 vs. NCBI nr
Match: XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])

HSP 1 Score: 309.3 bits (791), Expect = 4.9e-80
Identity = 189/398 (47.49%), Postives = 246/398 (61.81%), Query Frame = 0

Query: 16  MDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTND 75
           M  GR LP  I   IFSKLVIS+LP  RL+ +TWN +VLDYA+++  + LT A  + T D
Sbjct: 4   MKLGRGLPRRIVREIFSKLVISDLPNLRLISKTWNDMVLDYANSSHHEFLTNAFFLSTCD 63

Query: 76  EAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWS-IHIISQC 135
             +           N  M C+ FD+ KHL  +FDL+SE  KS SL FDG W+ + I++ C
Sbjct: 64  NRLD--------PRNLKMHCIRFDTTKHLDVDFDLESEWTKSSSLCFDGEWTFMAIMNYC 123

Query: 136 NGLLYVI-TNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDV--IGFGCGISTKQYKLF 195
           +GLL +    NY        GIFNPMTNEF+Q+P   +   D+   GFG   +TKQYKLF
Sbjct: 124 SGLLLICKCANY----TRCDGIFNPMTNEFLQVP-RGQLDNDIYYFGFGFTTTTKQYKLF 183

Query: 196 RVRTTFPRGGEGRKGMEMDVLRF------GNDNKWRYLPFLPSPSHVFVCSAYLNGVIYW 255
           RV  +F R  E   G  MDVL F       N N+WRYL +LP   H     AYLNG IYW
Sbjct: 184 RVCDSFSRNCEFESGSIMDVLTFSRSGTNANHNQWRYLHYLPLDIH--SNGAYLNGFIYW 243

Query: 256 LGKVEAKENEVVIHAFDVETEKFESSTILDV--GLVDQESLNLYKFKETIYATFI--EMT 315
           +GK E KENE  I+  DVETEK E S +L++   L   +   + +F +++YA F+  + T
Sbjct: 244 IGKEEEKENEYAIYVLDVETEKIELSIVLEICPPLCTSKVGGMQQFNDSVYAIFLINQPT 303

Query: 316 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 375
            +SIQVW+MQEK  WI E  V+DDIPN W  LT+I+A ED E ILCMVNF FFC+YN + 
Sbjct: 304 GNSIQVWRMQEKDLWIRE-FVVDDIPNDWNVLTLIKAFEDGE-ILCMVNFDFFCWYNPLT 363

Query: 376 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
           G  RKK+I +  +K R+  + +I+SLNFG L NIL+G+
Sbjct: 364 G--RKKIITKNEKKIRY--VCQIQSLNFGYLPNILAGD 380

BLAST of CsaV3_1G003460 vs. NCBI nr
Match: KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-66
Identity = 174/409 (42.54%), Postives = 232/409 (56.72%), Query Frame = 0

Query: 16  MDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYA---SATQFQCLTTALLIC 75
           M  GR LP  I + I  +LVISNLP  R+V +TWN  +LDYA   S+T       A L+ 
Sbjct: 12  MKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTN----ANAFLLS 71

Query: 76  TNDEAISFLDDSSKVNCNATMQCMDFDSRKH--LHANFDLDSELMKSPSLLFDGNWSI-- 135
           T+D            + N  M C+ FD+ KH  L  +FDL+ E  K PSL FDG+WS   
Sbjct: 72  TSDTG------PGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIP 131

Query: 136 HIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWH----DEYGYDVIGFGCGIS 195
            + + CNGL+++          ++ GIFNPMTNEF+Q+P H    D Y Y   G G   +
Sbjct: 132 MMDNSCNGLVFI-----RKCAFFSDGIFNPMTNEFLQVPRHELDGDNYFY---GLGFSPT 191

Query: 196 TKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGND------NKWRYLPFLPSPSHVFVC--S 255
           TKQYK+FRV               M +L F         N+WR L  LP    + +C   
Sbjct: 192 TKQYKMFRV-------NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLP----ILICCDG 251

Query: 256 AYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESL---NLYKFKETI 315
            YLNG IYW+G+ + KENE  I+A +VETE+ E S +L +G     S+   +L +F  ++
Sbjct: 252 VYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSV 311

Query: 316 YATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVN 375
           YATF    +     IQVW+MQEK  WI E  V+DDIPN+W  LT+I+A ED E ILCMVN
Sbjct: 312 YATFYIDPKTCNSVIQVWRMQEKDLWIKE-FVIDDIPNNWCSLTLIKAFEDGE-ILCMVN 371

Query: 376 FRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
             FFC+YNS  G  RKK++ + ++K R+  + +IE LNFG L NIL+GE
Sbjct: 372 LDFFCWYNSFTG--RKKIVTKNQKKCRY--VCEIEYLNFGLLPNILAGE 385

BLAST of CsaV3_1G003460 vs. NCBI nr
Match: TYK24751.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 4.4e-65
Identity = 174/409 (42.54%), Postives = 231/409 (56.48%), Query Frame = 0

Query: 16  MDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYA---SATQFQCLTTALLIC 75
           M  GR LP  I   I  +LVISNLP  R+V +TWN  +LDYA   S+T       A L+ 
Sbjct: 15  MKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTN----ANAFLLS 74

Query: 76  TNDEAISFLDDSSKVNCNATMQCMDFDSRKH--LHANFDLDSELMKSPSLLFDGNWSI-- 135
           T+D            + N  M C+ FD+ KH  L  +FDL+ E  K PSL FDG+WS   
Sbjct: 75  TSDTG------PGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIP 134

Query: 136 HIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWH----DEYGYDVIGFGCGIS 195
            + + CNGL+++    +      + GIFNPMTNEF+Q+P H    D Y Y   G G   +
Sbjct: 135 MMDNSCNGLVFIRKCAFFSR---SDGIFNPMTNEFLQVPRHELDGDNYFY---GLGFSPT 194

Query: 196 TKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGND------NKWRYLPFLPSPSHVFVC--S 255
           TKQYK+FRV               M +L F         N+WR L  LP    + +C   
Sbjct: 195 TKQYKMFRV-------NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLP----ILICCDG 254

Query: 256 AYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESL---NLYKFKETI 315
            YLNG IYW+G+ + KENE  I+A +VETE+ E S +L +G     S+   +L +F  ++
Sbjct: 255 VYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSV 314

Query: 316 YATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVN 375
           YATF    +     IQVW+MQEK  WI E  V+DDIPN+W  LT+I+A ED E ILCMVN
Sbjct: 315 YATFYIDPKTCNSVIQVWRMQEKDLWIKE-FVIDDIPNNWCSLTLIKAFEDGE-ILCMVN 374

Query: 376 FRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
             FFC+YNS  G  RKK++ + ++K R+  + +IE LNFG L NIL+GE
Sbjct: 375 LDFFCWYNSFTG--RKKIVTKNQKKCRY--VCEIEYLNFGLLPNILAGE 390

BLAST of CsaV3_1G003460 vs. ExPASy TrEMBL
Match: A0A0A0LRY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 839.7 bits (2168), Expect = 5.0e-240
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240
           GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240

Query: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300
           VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT
Sbjct: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300

Query: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360
           YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF
Sbjct: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360

Query: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ
Sbjct: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

BLAST of CsaV3_1G003460 vs. ExPASy TrEMBL
Match: A0A0A0LPH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015770 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.8e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 0

Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240

Query: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300

Query: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360

Query: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 400

BLAST of CsaV3_1G003460 vs. ExPASy TrEMBL
Match: A0A0A0LPC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70
Identity = 180/422 (42.65%), Postives = 243/422 (57.58%), Query Frame = 0

Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVISNLP CR VC+TWNH+VL YAS+TQ 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELMKSPSLL 122
           Q LT A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+ E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRMLNY------ELCNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY-GYDVIG 182
           F G+W+  I+    CNGL++ I+   +Y   +  GIFNPMTNEF Q+   D +  +   G
Sbjct: 143 FYGDWTFMILLAHPCNGLMF-ISKCSDY--TWCQGIFNPMTNEFFQVSEQDTFDDFYHYG 202

Query: 183 FGCGISTKQYKLFRVRTTFPRG---------GEGRKGMEMDVLRFGND--------NKWR 242
           FG    +KQYKLFRV    P           G       M+VL FG          N+WR
Sbjct: 203 FGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWR 262

Query: 243 YLPFLPSPSHVFVCSAYLNGVIYWLGKVEAK--ENEVVIHAFDVETEKFESSTILDVGLV 302
           +L  L   S   +   YLNG+IYWLGK + K  + E VI+A DVETE+ E S IL V   
Sbjct: 263 HLHNL---SCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQVQAS 322

Query: 303 DQESLNLYKFKETIYATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTII 362
           D +   ++ F  TIYA F    E    +IQVW MQEK SWI +  V+ DI   W  L +I
Sbjct: 323 DGK---MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQ-FVIRDISKEWGCLELI 382

Query: 363 EALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNIL 398
           +  ED E IL +++  FFCFY+ +    +K++I + ++K RF  + +IE LNFGSL  IL
Sbjct: 383 KIFEDGE-ILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRF--VCQIECLNFGSLPEIL 423

BLAST of CsaV3_1G003460 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.2e-69
Identity = 185/427 (43.33%), Postives = 249/427 (58.31%), Query Frame = 0

Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVIS+LP CRLV  TWN +VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELM 120
           AS+TQ Q L  A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+SE +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNY------KLCNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY- 180
           KS SL FDG+W+  II    CNGL+ +I+   +Y   +  GIFNPMTNEF+Q+  H  + 
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLM-LISKCSDY--TWCQGIFNPMTNEFLQVSEHGTFD 180

Query: 181 GYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGME-------MDVLRFGND-------- 240
            + + GFG    TKQYKLFRV   F +G   R+          M+VL FG          
Sbjct: 181 DFYLYGFGFSPITKQYKLFRV---FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPI 240

Query: 241 -NKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENE--VVIHAFDVETEKFESSTIL 300
            N+WR L  L  P  +     YLNG+IYWL K + K+ E   VI+A DVETE  E + +L
Sbjct: 241 HNQWRRLHTL--PFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVL 300

Query: 301 DVGLVDQESLNLYKFKETIYATF-IEMTYDS--IQVWKMQEKGSWIPEVLVMDDIPNHWR 360
            V         +++F  TIYATF I    DS  IQVW+MQEK SW+ +  V+ DI   W 
Sbjct: 301 QV--PSNGYGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRK-FVICDISREWI 360

Query: 361 DLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGS 398
            L +I+  ED E IL M+N  FFCFYN     ++K++I + ++K R+  I +IESLNFG 
Sbjct: 361 HLQLIKMFEDEE-ILFMINMDFFCFYNP--SSKKKRIISKNQKKKRY--ICQIESLNFGR 405

BLAST of CsaV3_1G003460 vs. ExPASy TrEMBL
Match: A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 174/409 (42.54%), Postives = 232/409 (56.72%), Query Frame = 0

Query: 16  MDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYA---SATQFQCLTTALLIC 75
           M  GR LP  I + I  +LVISNLP  R+V +TWN  +LDYA   S+T       A L+ 
Sbjct: 12  MKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTN----ANAFLLS 71

Query: 76  TNDEAISFLDDSSKVNCNATMQCMDFDSRKH--LHANFDLDSELMKSPSLLFDGNWSI-- 135
           T+D            + N  M C+ FD+ KH  L  +FDL+ E  K PSL FDG+WS   
Sbjct: 72  TSDTG------PGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIP 131

Query: 136 HIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWH----DEYGYDVIGFGCGIS 195
            + + CNGL+++          ++ GIFNPMTNEF+Q+P H    D Y Y   G G   +
Sbjct: 132 MMDNSCNGLVFI-----RKCAFFSDGIFNPMTNEFLQVPRHELDGDNYFY---GLGFSPT 191

Query: 196 TKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGND------NKWRYLPFLPSPSHVFVC--S 255
           TKQYK+FRV               M +L F         N+WR L  LP    + +C   
Sbjct: 192 TKQYKMFRV-------NPNNNSSIMYILTFRRSETNYKYNQWRQLHSLP----ILICCDG 251

Query: 256 AYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESL---NLYKFKETI 315
            YLNG IYW+G+ + KENE  I+A +VETE+ E S +L +G     S+   +L +F  ++
Sbjct: 252 VYLNGFIYWMGRKQYKENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSV 311

Query: 316 YATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVN 375
           YATF    +     IQVW+MQEK  WI E  V+DDIPN+W  LT+I+A ED E ILCMVN
Sbjct: 312 YATFYIDPKTCNSVIQVWRMQEKDLWIKE-FVIDDIPNNWCSLTLIKAFEDGE-ILCMVN 371

Query: 376 FRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
             FFC+YNS  G  RKK++ + ++K R+  + +IE LNFG L NIL+GE
Sbjct: 372 LDFFCWYNSFTG--RKKIVTKNQKKCRY--VCEIEYLNFGLLPNILAGE 385

BLAST of CsaV3_1G003460 vs. TAIR 10
Match: AT3G06240.1 (F-box family protein )

HSP 1 Score: 44.7 bits (104), Expect = 2.1e-04
Identity = 38/172 (22.09%), Postives = 73/172 (42.44%), Query Frame = 0

Query: 113 LMKSPSLLFDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIP------ 172
           ++K  +  +  NW + I+   NGL+ +              ++NP T +  ++P      
Sbjct: 150 MLKLNAKSYRRNW-VEIVGSSNGLVCISPGEGAVF------LYNPTTGDSKRLPENFRPK 209

Query: 173 --WHDEYGYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPF 232
              ++   +   GFG    T  YKL ++  T          ++  V     D+ WR +  
Sbjct: 210 SVEYERDNFQTYGFGFDGLTDDYKLVKLVAT------SEDILDASVYSLKADS-WRRICN 269

Query: 233 LPSPSH--VFVCSAYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILD 275
           L    +   +    + NG I+W+   E++ N+ V+ AFD++TE+F    + D
Sbjct: 270 LNYEHNDGSYTSGVHFNGAIHWV-FTESRHNQRVVVAFDIQTEEFREMPVPD 306

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004138336.11.0e-239100.00uncharacterized protein LOC101222225 [Cucumis sativus] >KGN63784.1 hypothetical ... [more]
KGN63785.13.7e-16573.96hypothetical protein Csa_013046 [Cucumis sativus][more]
XP_038890298.14.9e-8047.49F-box protein At3g07870-like [Benincasa hispida][more]
KAA0039746.13.1e-6642.54F-box protein [Cucumis melo var. makuwa][more]
TYK24751.14.4e-6542.54F-box protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LRY65.0e-240100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015760 PE=4 SV=1[more]
A0A0A0LPH01.8e-16573.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015770 PE=4 SV=1[more]
A0A0A0LPC62.9e-7042.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1[more]
A0A0A0LWG13.2e-6943.33F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ... [more]
A0A5A7TCF31.5e-6642.54F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ... [more]
Match NameE-valueIdentityDescription
AT3G06240.12.1e-0422.09F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 16..53
e-value: 7.5E-6
score: 25.7
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 131..349
e-value: 9.6E-23
score: 78.7
NoneNo IPR availableGENE3D1.20.1280.50coord: 17..56
e-value: 4.6E-6
score: 28.4
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 24..335
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 24..335
IPR013187F-box associated domain, type 3PFAMPF08268FBA_3coord: 237..346
e-value: 1.2E-8
score: 34.9
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 18..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G003460.1CsaV3_1G003460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding