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CsaV3_1G003370 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTGATTGGAACGGATTGTTTTTTGTAATTTGTCGTAAATATTTTGAACAATTTCTTAAACGTTGTCATGGTTTGATCTATTAAGGGAAATGATTTTATTTAAAGAATTGTGGAACTTTGGAAGGTAGTGCATGGCAATGGTGGCAAATGGAAAATGGATGGAGGAAGAAGGAGAAGACTGAAGATTAATATATATTAAATTCAATTTCATGTCAAGCACGTTCAAAGCGGTGCCCAACCCAACGATTCAAGCAAGAACATCGCCTTTGATGAATTTGGACTGCCAGATGAACCAACCCATCATTTTTCAATTCAAAATTCCAATCATGGCGTATCTAGAATTTGATTTCATGCCTCTTACCACTTATGCTTATTATAAGTACCTGATTTTCTTTAAACCCATCACCGGAAAATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGTTAAGCTGGGTCTAATATGTGTTGATTAGCTTTTTTTTTTTTTTTTTTCCATGGGATTTCTGTTTTTCTGAAGATGTTGATGTTTTTCAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTAAGTTTCTGTGATGCCTTTCATTTCTCTTTTCCATGTGAGTCTAGAAGGGAAGATTGGTTGGTAGATAACAATGAATTAGTGTATGAATATGTTGTCATGTTTTCTATTTTTTTTCCACATGAATCTAGAGATGAAGAGAGAACTGATTGACAGGTTAACAGTAAACAATACATAATCATAATTTAGTGTAGGATTATGTTGCTAGGACAATAGGCTCTTGGTGTTTCTGTATTACTCCATGAAATAGTAAGATATTGTCCACTTTAACTTAATCCGTTAATTTTGCTTTTAAATTATGCACAAGAGGTGTATATGATTATATGGTTTCTATCATGTTGTGTTGTCAACTGTCTTTAATTTGTTCCTTCTATCTGTGATTAGGTGCTAGTTTGAATTTTTGGCTTAGATATCCGTTGAATGTGGATTCTAAGCAGAATGAGTTAACTGAAGAAACACAACACTCGATGTTACAAAAAAAATTAAGCGGAAGGAATTATTATTTAATTTCAGGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGAATCTGTATGTTATACTTTCTTCTTTCAGCTGCCATTGTTGTTTTTGTAGAGAAAAACAAGATGGAAATGGTGAGGCTTCTGATATTGTAAGTCTCATCTAGCCTCACTTTTTGCTTCTTTAATTGCAATGGAGTGGCTGTATTACTCAAAAGTAGAAAACCCAAGAACAAAAAAAAATTGATGTAGAAATTTGTAAATTGATCCTCTTTTTGTCACTGTTATTTGATCCAAACTAAAAGATTATCATAGATTTGGGAGGGAGCCTTTGTTGTCTCTGTCTTATACATGAGAGTATTAGAATTCAGTCTTATCGGT ATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGA ATGGCTAGGAAACACACCCGATTGCAGAGGGTGAGAATTTCTCAACCCTCTGGTTGTTTTCAGGTATGTTTCCGGCAAATTCGAACCAGACCCACCGTCGATTCGATTCAGAATTTTCAGAGGGAGGAACTTTTAGGGGATGGGTATTGCGCGGGAAGTGTGAAATCTGTGGATCAGATTGGTAATAGAATAATGGTTGTGGTTGATTCTAGTTTTGAGGGTAAAGGAGCTCTTGAATGGGCTTTGTCTCATGCTGTTCAGTCTCATGATTCTATTATTCTTCTTCACGTTTCTAAATCTTCAAAACAAGGCGTTGTGTTTGATGAAAAGCTTGACATGAAGGCTTATCAGCTTCTTCTGTCTTTGAAGAATATGTGTCAAATGAGAAGGCCAGGAGTTCAAGTGGAGATGGAATTCCTACAGGGGAAGGAGATGGGTCGTGTGATCGTCGAAGAAGCCAAGAAACAGCGAGTGTCTCTGTTGGTTCTTGGGCAAAGGAAGCAATCTCCATTCCGGTCACTGATAAAGAAGTTCAGTACAAACAAGAGAAGGAATCATGGAGGGATTGTGGAGTACTGCATCCAAACATCTTCATGCCTAACCATTGCGGTGAGGAGGAAAAGCAAGAAAGTAGGAGGATATTTGATCACGACAAAAAGTCACAAGAATTTCTGGCTTTTGGCTTGA MARKHTRLQRVRISQPSGCFQVCFRQIRTRPTVDSIQNFQREELLGDGYCAGSVKSVDQIGNRIMVVVDSSFEGKGALEWALSHAVQSHDSIILLHVSKSSKQGVVFDEKLDMKAYQLLLSLKNMCQMRRPGVQVEMEFLQGKEMGRVIVEEAKKQRVSLLVLGQRKQSPFRSLIKKFSTNKRRNHGGIVEYCIQTSSCLTIAVRRKSKKVGGYLITTKSHKNFWLLA* Homology
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_004138331.1 (uncharacterized protein LOC101221050 [Cucumis sativus] >KAE8652448.1 hypothetical protein Csa_013982 [Cucumis sativus]) HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_008453308.1 (PREDICTED: uncharacterized protein LOC103494065 [Cucumis melo]) HSP 1 Score: 443.7 bits (1140), Expect = 9.4e-121 Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_038880017.1 (uncharacterized protein LOC120071709 [Benincasa hispida]) HSP 1 Score: 397.5 bits (1020), Expect = 7.7e-107 Identity = 208/232 (89.66%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102 Identity = 193/231 (83.55%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. NCBI nr
Match: XP_022966082.1 (uncharacterized protein LOC111465801 [Cucurbita maxima]) HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102 Identity = 194/231 (83.98%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. ExPASy TrEMBL
Match: A0A1S3BVX2 (uncharacterized protein LOC103494065 OS=Cucumis melo OX=3656 GN=LOC103494065 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 4.6e-121 Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. ExPASy TrEMBL
Match: A0A6J1HM19 (uncharacterized protein LOC111465801 OS=Cucurbita maxima OX=3661 GN=LOC111465801 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 9.5e-103 Identity = 194/231 (83.98%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. ExPASy TrEMBL
Match: A0A6J1F4R8 (uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC111440820 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102 Identity = 192/231 (83.12%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. ExPASy TrEMBL
Match: A0A6J1C057 (universal stress protein PHOS32-like OS=Momordica charantia OX=3673 GN=LOC111007264 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101 Identity = 193/231 (83.55%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. ExPASy TrEMBL
Match: A0A0A0LPN5 (Usp domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015670 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.5e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 182.2 bits (461), Expect = 4.8e-46 Identity = 89/174 (51.15%), Postives = 126/174 (72.41%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 1.1e-45 Identity = 84/170 (49.41%), Postives = 129/170 (75.88%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 147.9 bits (372), Expect = 9.9e-36 Identity = 83/168 (49.40%), Postives = 117/168 (69.64%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 146.7 bits (369), Expect = 2.2e-35 Identity = 85/186 (45.70%), Postives = 119/186 (63.98%), Query Frame = 0
BLAST of CsaV3_1G003370 vs. TAIR 10
Match: AT1G69080.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29 Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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