CsaV3_1G003230 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G003230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr1: 2003209 .. 2006669 (+)
RNA-Seq Expression	CsaV3_1G003230
Synteny	CsaV3_1G003230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGAATAAGAGTGCATGTAAGACTAGAGAGTGAATGAGGAATAGCCGTAATGTATAAAAGCCGTTAGTTGAATACATGTTTGGTATTAGAACAAAAATAGAAAAGAGTATGAGCACAAACGAATAACAAGAACAAAATGCTATGTATAGTTTTGTTCATCATCTTCACAAAAATCTAATACACTAAATTTTGAACTCAATACATAACTGCATAAGAAAAACTAAAATACATGAACGATTTCCATCAACAAGCTCTCTTCAATGGCTGTGGTGGCGCCGCTATTCTCTGGCTGCCACCGCTCTCCGATCATGTATAAACCAACTCCAACTCCAACTCCACCTCCCACTCCCATATCAATTTTAAAAAATTCCCTTCTTTCAACTTCAACTCCAAAATCTTCGTACTTCTTTGTCTCTGCTCGAACTCAATCCCATCAATCTCGATCCGTCAACCCGGTTTCTCAGCTCTCGCTTCTCGAAGAGATTTCCAAGCTCTGTGAAGCGGGTGATCTCAATGGAGCTCTCGATTTTCTTCAGAGAGCCTGGAAGAACAATGCTGGGTATGATTTGGCTCAGAGAAAAGAGGCCATGGGTATGTTATTGCAGAAATGTGGGCAGTATAAAAACGTCGAAATTGGCCGGAAACTTGATGAAATGTTGTGCGTTTCCTCTCAGTTCAGCGGCGACTTTGTCCTCAATACCCGTCTCATCACAATGTACTCCATTTGTGGATATCCTTTGGAATCTCGATTGGTCTTTGATCGTTTGCTGAATAAGAATTTGTTTCAATGGAATGCACTTGTTAGTGGGTACGTTAGAAATGAACTGTACGACGAGGCAATTCACACTTTCCTTGAGTTGATATCGGTAACTGAATTTCAACCTGATAATTTTACATTTCCTTGCTTGATCAAGGCTTGTACTGGGAAATGTGATATTCATTTGGGGAAATCGGTTCATGGGATGGCGGTGAAAATGGGGTTGATCATGGATTTGTTTGTGGGTAATGCGATGATTGCACTTTATGGGAAATGTGGGTTTTTAGACGAAGCCGTCGAGTTGTTTGATAAAATGCCTGAACAAAACTTGATCTCTTGGAATTCGTTGATTCGTGGGTTTTCTGAGAATGGATTTTGGCTGGAAGCTTATAGGGCGTTTAGAAGTCTTTTGGAGAGTGGCGATGGATTGATTCCGGATGTTGCTACAATGGTAACTCTGTTGCCTGTGTGTTCAGGAGAAGGAAATGTAGATGTGGGAATGGTGATTCATGGGATGGCAGTGAAACTGGGGCTTGTTCATGAACTAATGGTGTGTAATGCTTTGATTGACATGTACTCAAAATGCGGTTGCTTATCAGAAGCAGCGATTTTATTTCGTAAGATTGAGAACAAAAGTGTAGTTTCTTGGAATTCCATGATTGGTGCATATTCTAGGGAAGGATTCGTATTTGAAACATTCGATCTGTTGAGAAAGATGTGGATGGAAGAAGAATTGATGGAAGTAAATGAGGTCACCATTTTGAATTTGTTACCTGCTTGTTTGGAAGAATCTGAACTGTTGAGTTTGAGGGCACTTCATGGATATTCACTTAGACATTCGTTTCAATACAAAGAATTGATAAATAATGCGTTTATAGCAGCCTATGCAAAGTGTGGATCATTGGTTTTTGCTGAGCACGTCTTCTTTGGAATGAATACGAAGTCAGTGAGCTCTTGGAATGCAGTCATTGGTGGACATGCTCAAAATGGTGATCCGATAAAAGCTTTAGACTTTTATTTTGAGATGACACGTTTGGGCATTCTTCCTGACGATTTTAGCATTGTTAGCCTACTATTGGCTTGTGGCCGTTTGGGACTTCTACAATATGGCAAAGAGATACATGGATTTGTGCTAAGGAATGGGTTAGAGATGAATTCATTTGTTGCTGTCTCCTTGTTATCACTTTATTTCCATTGTTCTAAACCTTTCTACGGCAGAACTTACTTTGAAACGATGGGAGACAAAAACTCAGTGTGTTGGAATGCGATGCTTTCTGGTTATTCTCAAAATGAACTTCCAAACGAAGCTCTCTCTCTGTTTCGTCAAATGCTTTCTGACGGACTTGAACCTGATGAGATTGCCATAGCGAGTATTCTTGGGGCTTGCTCACAGCTATCAGCTCTTGGTCTCGGAAAAGAAGTTCATTGCTTTGCCTTAAAAAACAGTCTAATGGAAGACAATTTTGTTGCTTGTTCGCTCATGGACATGTATGCCAAAAGCGGCTTTCTGGGACATTCTCAACGAATATTTAACAGGTTAAATGGCAAAGAAGTGGCTTCATGGAACGTCATGATCACAGGATTTGGTGTTCATGGACAAGGTAACAAGGCCGTGGAGCTATTTGAGGATATGAAAAGATCAGATAAGCAACCTGATAGGTTCACTTTTCTAGGAGTTCTTCAGGCATGTTGTCATGCTGGATTGGTATCAGAGGGGCTGAATTATCTAGCTCAAATGCAAACTTTGTACAAATTAGAGCCAGAACTGGAGCACTATGCCTGTGTGATCGACATGCTCGGTAGAGCAGGCCGACTAAATGAGGCATTAAACTTCATAAACGAAATGCCTGAAGAACCAGATGCTAAAATCTGGAGCTCATTGCTCAGTTCGAGTATAACTTATGTTGATCTAGAAATGGGAGAGAAGTTTGCTGAAAAATTGTTAGCACTAGAAGCAAACAAAGCTGACAGCTATATTTTACTCTCTAACTTGTATGCAACAGCAGGAAAATGGGATGTTGTGCGAATGGTGAGACAGAAAATGAAGGATCTCAGCCTTCAGAAAGATGTTGGGTGCAGTTGGATTGAACTTCGAGGTAAAGTCTATAGTTTTATAGCTGGGGAAAACTCGAATCCAAGTTCAGACGAGATACGAAAGATGTGGAATAGATTGGAGAAACAGATAGTGGAAATTGGGTACACACCTGATTGTAGTTGTGTTCTTCATGAATTGGAAGAGGTGGAAAAGAGGAAGATATTGAAAGGGCATAGTGAGAAGGTTGCAATTTGTTTTGGGTTCTTAAACACTAAAGAAGGAACTACATTGAGAATCTCCAAAAATCTAAGAATTTGTAGAGACTGTCACAATGCAGCAAAGTATATAAGTAAAGCTGCTAAAAGAGAAATTGTTATTAGAGACAACAAGCGTTTTCATCACTTCAAAAAAGGGATTTGTTCATGTGGAGATTACTGGTAAAAGAAGAAGAAGAAGAAGATCATTACTGTTTCTTGATTCTTCTTCAAGATTTAAAATCACCCCTCCCTTATGGTAAAGTTATTTGCTTTAAGATATTAAATTGAAATTTGATTTAACTTAAATTTACTTTAAAATCATAGAGCTAACTGAAAATAATTTCAATATCAATTTTTTTATCAATGGGTTCCTAAGGAAACTTCTTCCCATACCCATCAATCTATATTGGG

mRNA sequence

ATGGCTGTGGTGGCGCCGCTATTCTCTGGCTGCCACCGCTCTCCGATCATGTATAAACCAACTCCAACTCCAACTCCACCTCCCACTCCCATATCAATTTTAAAAAATTCCCTTCTTTCAACTTCAACTCCAAAATCTTCGTACTTCTTTGTCTCTGCTCGAACTCAATCCCATCAATCTCGATCCGTCAACCCGGTTTCTCAGCTCTCGCTTCTCGAAGAGATTTCCAAGCTCTGTGAAGCGGGTGATCTCAATGGAGCTCTCGATTTTCTTCAGAGAGCCTGGAAGAACAATGCTGGGTATGATTTGGCTCAGAGAAAAGAGGCCATGGGTATGTTATTGCAGAAATGTGGGCAGTATAAAAACGTCGAAATTGGCCGGAAACTTGATGAAATGTTGTGCGTTTCCTCTCAGTTCAGCGGCGACTTTGTCCTCAATACCCGTCTCATCACAATGTACTCCATTTGTGGATATCCTTTGGAATCTCGATTGGTCTTTGATCGTTTGCTGAATAAGAATTTGTTTCAATGGAATGCACTTGTTAGTGGGTACGTTAGAAATGAACTGTACGACGAGGCAATTCACACTTTCCTTGAGTTGATATCGGTAACTGAATTTCAACCTGATAATTTTACATTTCCTTGCTTGATCAAGGCTTGTACTGGGAAATGTGATATTCATTTGGGGAAATCGGTTCATGGGATGGCGGTGAAAATGGGGTTGATCATGGATTTGTTTGTGGGTAATGCGATGATTGCACTTTATGGGAAATGTGGGTTTTTAGACGAAGCCGTCGAGTTGTTTGATAAAATGCCTGAACAAAACTTGATCTCTTGGAATTCGTTGATTCGTGGGTTTTCTGAGAATGGATTTTGGCTGGAAGCTTATAGGGCGTTTAGAAGTCTTTTGGAGAGTGGCGATGGATTGATTCCGGATGTTGCTACAATGGTAACTCTGTTGCCTGTGTGTTCAGGAGAAGGAAATGTAGATGTGGGAATGGTGATTCATGGGATGGCAGTGAAACTGGGGCTTGTTCATGAACTAATGGTGTGTAATGCTTTGATTGACATGTACTCAAAATGCGGTTGCTTATCAGAAGCAGCGATTTTATTTCGTAAGATTGAGAACAAAAGTGTAGTTTCTTGGAATTCCATGATTGGTGCATATTCTAGGGAAGGATTCGTATTTGAAACATTCGATCTGTTGAGAAAGATGTGGATGGAAGAAGAATTGATGGAAGTAAATGAGGTCACCATTTTGAATTTGTTACCTGCTTGTTTGGAAGAATCTGAACTGTTGAGTTTGAGGGCACTTCATGGATATTCACTTAGACATTCGTTTCAATACAAAGAATTGATAAATAATGCGTTTATAGCAGCCTATGCAAAGTGTGGATCATTGGTTTTTGCTGAGCACGTCTTCTTTGGAATGAATACGAAGTCAGTGAGCTCTTGGAATGCAGTCATTGGTGGACATGCTCAAAATGGTGATCCGATAAAAGCTTTAGACTTTTATTTTGAGATGACACGTTTGGGCATTCTTCCTGACGATTTTAGCATTGTTAGCCTACTATTGGCTTGTGGCCGTTTGGGACTTCTACAATATGGCAAAGAGATACATGGATTTGTGCTAAGGAATGGGTTAGAGATGAATTCATTTGTTGCTGTCTCCTTGTTATCACTTTATTTCCATTGTTCTAAACCTTTCTACGGCAGAACTTACTTTGAAACGATGGGAGACAAAAACTCAGTGTGTTGGAATGCGATGCTTTCTGGTTATTCTCAAAATGAACTTCCAAACGAAGCTCTCTCTCTGTTTCGTCAAATGCTTTCTGACGGACTTGAACCTGATGAGATTGCCATAGCGAGTATTCTTGGGGCTTGCTCACAGCTATCAGCTCTTGGTCTCGGAAAAGAAGTTCATTGCTTTGCCTTAAAAAACAGTCTAATGGAAGACAATTTTGTTGCTTGTTCGCTCATGGACATGTATGCCAAAAGCGGCTTTCTGGGACATTCTCAACGAATATTTAACAGGTTAAATGGCAAAGAAGTGGCTTCATGGAACGTCATGATCACAGGATTTGGTGTTCATGGACAAGGTAACAAGGCCGTGGAGCTATTTGAGGATATGAAAAGATCAGATAAGCAACCTGATAGGTTCACTTTTCTAGGAGTTCTTCAGGCATGTTGTCATGCTGGATTGGTATCAGAGGGGCTGAATTATCTAGCTCAAATGCAAACTTTGTACAAATTAGAGCCAGAACTGGAGCACTATGCCTGTGTGATCGACATGCTCGGTAGAGCAGGCCGACTAAATGAGGCATTAAACTTCATAAACGAAATGCCTGAAGAACCAGATGCTAAAATCTGGAGCTCATTGCTCAGTTCGAGTATAACTTATGTTGATCTAGAAATGGGAGAGAAGTTTGCTGAAAAATTGTTAGCACTAGAAGCAAACAAAGCTGACAGCTATATTTTACTCTCTAACTTGTATGCAACAGCAGGAAAATGGGATGTTGTGCGAATGGTGAGACAGAAAATGAAGGATCTCAGCCTTCAGAAAGATGTTGGGTGCAGTTGGATTGAACTTCGAGGTAAAGTCTATAGTTTTATAGCTGGGGAAAACTCGAATCCAAGTTCAGACGAGATACGAAAGATGTGGAATAGATTGGAGAAACAGATAGTGGAAATTGGGTACACACCTGATTGTAGTTGTGTTCTTCATGAATTGGAAGAGGTGGAAAAGAGGAAGATATTGAAAGGGCATAGTGAGAAGGTTGCAATTTGTTTTGGGTTCTTAAACACTAAAGAAGGAACTACATTGAGAATCTCCAAAAATCTAAGAATTTGTAGAGACTGTCACAATGCAGCAAAGTATATAAGTAAAGCTGCTAAAAGAGAAATTGTTATTAGAGACAACAAGCGTTTTCATCACTTCAAAAAAGGGATTTGTTCATGTGGAGATTACTGGTAA

Coding sequence (CDS)

ATGGCTGTGGTGGCGCCGCTATTCTCTGGCTGCCACCGCTCTCCGATCATGTATAAACCAACTCCAACTCCAACTCCACCTCCCACTCCCATATCAATTTTAAAAAATTCCCTTCTTTCAACTTCAACTCCAAAATCTTCGTACTTCTTTGTCTCTGCTCGAACTCAATCCCATCAATCTCGATCCGTCAACCCGGTTTCTCAGCTCTCGCTTCTCGAAGAGATTTCCAAGCTCTGTGAAGCGGGTGATCTCAATGGAGCTCTCGATTTTCTTCAGAGAGCCTGGAAGAACAATGCTGGGTATGATTTGGCTCAGAGAAAAGAGGCCATGGGTATGTTATTGCAGAAATGTGGGCAGTATAAAAACGTCGAAATTGGCCGGAAACTTGATGAAATGTTGTGCGTTTCCTCTCAGTTCAGCGGCGACTTTGTCCTCAATACCCGTCTCATCACAATGTACTCCATTTGTGGATATCCTTTGGAATCTCGATTGGTCTTTGATCGTTTGCTGAATAAGAATTTGTTTCAATGGAATGCACTTGTTAGTGGGTACGTTAGAAATGAACTGTACGACGAGGCAATTCACACTTTCCTTGAGTTGATATCGGTAACTGAATTTCAACCTGATAATTTTACATTTCCTTGCTTGATCAAGGCTTGTACTGGGAAATGTGATATTCATTTGGGGAAATCGGTTCATGGGATGGCGGTGAAAATGGGGTTGATCATGGATTTGTTTGTGGGTAATGCGATGATTGCACTTTATGGGAAATGTGGGTTTTTAGACGAAGCCGTCGAGTTGTTTGATAAAATGCCTGAACAAAACTTGATCTCTTGGAATTCGTTGATTCGTGGGTTTTCTGAGAATGGATTTTGGCTGGAAGCTTATAGGGCGTTTAGAAGTCTTTTGGAGAGTGGCGATGGATTGATTCCGGATGTTGCTACAATGGTAACTCTGTTGCCTGTGTGTTCAGGAGAAGGAAATGTAGATGTGGGAATGGTGATTCATGGGATGGCAGTGAAACTGGGGCTTGTTCATGAACTAATGGTGTGTAATGCTTTGATTGACATGTACTCAAAATGCGGTTGCTTATCAGAAGCAGCGATTTTATTTCGTAAGATTGAGAACAAAAGTGTAGTTTCTTGGAATTCCATGATTGGTGCATATTCTAGGGAAGGATTCGTATTTGAAACATTCGATCTGTTGAGAAAGATGTGGATGGAAGAAGAATTGATGGAAGTAAATGAGGTCACCATTTTGAATTTGTTACCTGCTTGTTTGGAAGAATCTGAACTGTTGAGTTTGAGGGCACTTCATGGATATTCACTTAGACATTCGTTTCAATACAAAGAATTGATAAATAATGCGTTTATAGCAGCCTATGCAAAGTGTGGATCATTGGTTTTTGCTGAGCACGTCTTCTTTGGAATGAATACGAAGTCAGTGAGCTCTTGGAATGCAGTCATTGGTGGACATGCTCAAAATGGTGATCCGATAAAAGCTTTAGACTTTTATTTTGAGATGACACGTTTGGGCATTCTTCCTGACGATTTTAGCATTGTTAGCCTACTATTGGCTTGTGGCCGTTTGGGACTTCTACAATATGGCAAAGAGATACATGGATTTGTGCTAAGGAATGGGTTAGAGATGAATTCATTTGTTGCTGTCTCCTTGTTATCACTTTATTTCCATTGTTCTAAACCTTTCTACGGCAGAACTTACTTTGAAACGATGGGAGACAAAAACTCAGTGTGTTGGAATGCGATGCTTTCTGGTTATTCTCAAAATGAACTTCCAAACGAAGCTCTCTCTCTGTTTCGTCAAATGCTTTCTGACGGACTTGAACCTGATGAGATTGCCATAGCGAGTATTCTTGGGGCTTGCTCACAGCTATCAGCTCTTGGTCTCGGAAAAGAAGTTCATTGCTTTGCCTTAAAAAACAGTCTAATGGAAGACAATTTTGTTGCTTGTTCGCTCATGGACATGTATGCCAAAAGCGGCTTTCTGGGACATTCTCAACGAATATTTAACAGGTTAAATGGCAAAGAAGTGGCTTCATGGAACGTCATGATCACAGGATTTGGTGTTCATGGACAAGGTAACAAGGCCGTGGAGCTATTTGAGGATATGAAAAGATCAGATAAGCAACCTGATAGGTTCACTTTTCTAGGAGTTCTTCAGGCATGTTGTCATGCTGGATTGGTATCAGAGGGGCTGAATTATCTAGCTCAAATGCAAACTTTGTACAAATTAGAGCCAGAACTGGAGCACTATGCCTGTGTGATCGACATGCTCGGTAGAGCAGGCCGACTAAATGAGGCATTAAACTTCATAAACGAAATGCCTGAAGAACCAGATGCTAAAATCTGGAGCTCATTGCTCAGTTCGAGTATAACTTATGTTGATCTAGAAATGGGAGAGAAGTTTGCTGAAAAATTGTTAGCACTAGAAGCAAACAAAGCTGACAGCTATATTTTACTCTCTAACTTGTATGCAACAGCAGGAAAATGGGATGTTGTGCGAATGGTGAGACAGAAAATGAAGGATCTCAGCCTTCAGAAAGATGTTGGGTGCAGTTGGATTGAACTTCGAGGTAAAGTCTATAGTTTTATAGCTGGGGAAAACTCGAATCCAAGTTCAGACGAGATACGAAAGATGTGGAATAGATTGGAGAAACAGATAGTGGAAATTGGGTACACACCTGATTGTAGTTGTGTTCTTCATGAATTGGAAGAGGTGGAAAAGAGGAAGATATTGAAAGGGCATAGTGAGAAGGTTGCAATTTGTTTTGGGTTCTTAAACACTAAAGAAGGAACTACATTGAGAATCTCCAAAAATCTAAGAATTTGTAGAGACTGTCACAATGCAGCAAAGTATATAAGTAAAGCTGCTAAAAGAGAAATTGTTATTAGAGACAACAAGCGTTTTCATCACTTCAAAAAAGGGATTTGTTCATGTGGAGATTACTGGTAA

Protein sequence

MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW*

Homology

[Close]

BLAST of CsaV3_1G003230 vs. NCBI nr
Match: XP_004138210.2 (pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >XP_031735992.1 pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >KGN63758.1 hypothetical protein Csa_013257 [Cucumis sativus])

HSP 1 Score: 2006.1 bits (5196), Expect = 0.0e+00
Identity = 990/990 (100.00%), Postives = 990/990 (100.00%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
           MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS
Sbjct: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60

Query: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
           RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY
Sbjct: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120

Query: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
           KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180

Query: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
           VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240

Query: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
           LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300

Query: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
           SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360

Query: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
           CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420

Query: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
           NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480

Query: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
           SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540

Query: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
           GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600

Query: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
           EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660

Query: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
           DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720

Query: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
           TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780

Query: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
           MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840

Query: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900
           RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT
Sbjct: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900

Query: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960
           PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI
Sbjct: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960

Query: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           SKAAKREIVIRDNKRFHHFKKGICSCGDYW
Sbjct: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 990

[Close]

BLAST of CsaV3_1G003230 vs. NCBI nr
Match: XP_008453326.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo] >KAA0058024.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1865.1 bits (4830), Expect = 0.0e+00
Identity = 922/992 (92.94%), Postives = 951/992 (95.87%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYK--PTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSH 60
           MAVVAPLFSG HRSPIMYK  PTPTPTP PTPISI KNSLLSTSTPKSSYFFVS RTQ+H
Sbjct: 1   MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60

Query: 61  QSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCG 120
           QSRS+NPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMG LLQKCG
Sbjct: 61  QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120

Query: 121 QYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWN 180
           QYKNVEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYPLESRLVFDRL NKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180

Query: 181 ALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVK 240
           ALVSGYVRN+LYDEAIHTF+ELISVTEFQPDNFTFPCLIKACTGKCD+HLGKSVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240

Query: 241 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 300
           MGLIMDLFVGNAMI+LYGK GFLDEAVE+FDKMPEQNLISWNSLI GFSENGFWLEAYRA
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300

Query: 301 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 360
           FRSLLESGDGL PDVATMVTLLPVCSGEGNVD+GM+IHGMAVKLGLVHELMVCNALIDMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360

Query: 361 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 420
           SKCGCLSEAAILF KIENK+VVSWNSMIGAYSREGFVFETFDLLRKMW EE++ EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420

Query: 421 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 480
           ILN LPACLEE+ELLSL+ALHGYSLR SFQY+ELINN FIAAYAKCGSLV AEHVFFGMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480

Query: 481 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 540
           TKSVSSWNA+IG +AQNGDP KALDFYFEMTRLGILPDDFSIVSLLLACGRLG LQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540

Query: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 600
           IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT FE M +KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600

Query: 601 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 660
           PNE LS FRQMLS+GLEPDEI I S+LGACSQLSALGLGKEVHCF LKNSLMEDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660

Query: 661 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 720
           LMDMYAKSGFLGHSQ+IFN LN KEVASWNVMITGFGVHGQGNKAVELFEDM+RS+KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720

Query: 721 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI 780
           RFTFLGVLQACCHAGLVSEG+ YLAQMQTLYKLEPEL+HYACVIDMLGRAGRLNEALNFI
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780

Query: 781 NEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWD 840
           NEMPEEPDAKIWSSLLSSSIT+VDLEMGEKF EKLLALEANKADSYILLSNLYATAGKWD
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKWD 840

Query: 841 VVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900
           VVRMVRQKMKDLSLQKD GCSWIEL+GKVYSFIAGENSN SSDEIRKMWNRLEKQIVEIG
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEIG 900

Query: 901 YTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAK 960
           YTPDCSCVLHELEEVEK KILKGHSEK+AI FGFLNTKEGTTLRISKNLRICRDCHNAAK
Sbjct: 901 YTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAAK 960

Query: 961 YISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           YISKAAKREIVIRDNKRFHHFK GICSCG+YW
Sbjct: 961 YISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992

[Close]

BLAST of CsaV3_1G003230 vs. NCBI nr
Match: TYJ98247.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1864.4 bits (4828), Expect = 0.0e+00
Identity = 922/992 (92.94%), Postives = 951/992 (95.87%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYK--PTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSH 60
           MAVVAPLFSG HRSPIMYK  PTPTPTP PTPISI KNSLLSTSTPKSSYFFVS RTQ+H
Sbjct: 1   MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60

Query: 61  QSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCG 120
           QSRS+NPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMG LLQKCG
Sbjct: 61  QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120

Query: 121 QYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWN 180
           QYKNVEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYPLESRLVFDRL NKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180

Query: 181 ALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVK 240
           ALVSGYVRN+LYDEAIHTF+ELISVTEFQPDNFTFPCLIKACTGKCD+HLGKSVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240

Query: 241 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 300
           MGLIMDLFVGNAMI+LYGK GFLDEAVE+FDKMPEQNLISWNSLI GFSENGFWLEAYRA
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300

Query: 301 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 360
           FRSLLESGDGL PDVATMVTLLPVCSGEGNVD+GM+IHGMAVKLGLVHELMVCNALIDMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360

Query: 361 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 420
           SKCGCLSEAAILF KIENK+VVSWNSMIGAYSREGFVFETFDLLRKMW EE++ EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420

Query: 421 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 480
           ILN LPACLEE+ELLSL+ALHGYSLR SFQY+ELINN FIAAYAKCGSLV AEHVFFGMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480

Query: 481 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 540
           TKSVSSWNA+IG +AQNGDP KALDFYFEMTRLGILPDDFSIVSLLLACGRLG LQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540

Query: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 600
           IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT FE M +KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600

Query: 601 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 660
           PNE LS FRQMLS+GLEPDEI I S+LGACSQLSALGLGKEVHCF LKNSLMEDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660

Query: 661 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 720
           LMDMYAKSGFLGHSQ+IFN LN KEVASWNVMITGFGVHGQGNKAVELFEDM+RS+KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720

Query: 721 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI 780
           RFTFLGVLQACCHAGLVSEG+ YLAQMQTLYKLEPEL+HYACVIDMLGRAGRLNEALNFI
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780

Query: 781 NEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWD 840
           NEMPEEPDAKIWSSLLSSSIT+VDLEMGEKF EKLLALEANKADSYILLSNLYATAGK D
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKRD 840

Query: 841 VVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900
           VVRMVRQKMKDLSLQKD GCSWIEL+GKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900

Query: 901 YTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAK 960
           YTPDCSCVLHELEEVEK K+LKGHSEK+AI FGFLNTKEGTTLRISKNLRICRDCHNAAK
Sbjct: 901 YTPDCSCVLHELEEVEKIKVLKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAAK 960

Query: 961 YISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           YISKAAKREIVIRDNKRFHHFK GICSCGDYW
Sbjct: 961 YISKAAKREIVIRDNKRFHHFKNGICSCGDYW 992

[Close]

BLAST of CsaV3_1G003230 vs. NCBI nr
Match: XP_038880056.1 (pentatricopeptide repeat-containing protein At1g18485 [Benincasa hispida])

HSP 1 Score: 1753.4 bits (4540), Expect = 0.0e+00
Identity = 864/990 (87.27%), Postives = 922/990 (93.13%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
           MAVVAP FSG HR PI+YKPTPTPT      SI KNSLLSTSTPK SYF VSA+TQ+HQS
Sbjct: 1   MAVVAPPFSGRHRPPIIYKPTPTPT------SIFKNSLLSTSTPK-SYFSVSAQTQTHQS 60

Query: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
           RS NPVSQLSLLEEI KLCEA +LNGAL+FLQR WKNN G+DLAQRKEAMGMLLQKCGQ+
Sbjct: 61  RSTNPVSQLSLLEEIFKLCEASNLNGALNFLQRVWKNNPGFDLAQRKEAMGMLLQKCGQH 120

Query: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
           K+VEIGRKLDEML VSSQF GDFVLNTRLITMYSICGYP +SRLVFDRL NKNLFQWNAL
Sbjct: 121 KDVEIGRKLDEMLSVSSQFCGDFVLNTRLITMYSICGYPSDSRLVFDRLQNKNLFQWNAL 180

Query: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
           VSGYVRNELYDEAIHTF+ELISVTEF+PDNFT PCLIKACTGK D+HLG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFIELISVTEFEPDNFTLPCLIKACTGKYDVHLGQSVHGMAVKMG 240

Query: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
           LIMDLFVGNAMI+LYGKCGF+DEAV++FDKMPE+NLISWNSLI GFSENGFWLEAY AFR
Sbjct: 241 LIMDLFVGNAMISLYGKCGFVDEAVKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFR 300

Query: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
           SLLE GDGLIPDVATMVTLLPVCSGEG+VD+GMVIHGMAVKLGLVHELMVCNAL+DMYSK
Sbjct: 301 SLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSK 360

Query: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
           CGCLS+A ILFRKIENK++VSWNSMIGAYSREGFV+ETF+LLRKMWMEEE+MEVNEVTIL
Sbjct: 361 CGCLSQAVILFRKIENKNIVSWNSMIGAYSREGFVYETFELLRKMWMEEEMMEVNEVTIL 420

Query: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
           NLLPACLEE+ELLSLRALHGYSLR+SFQ  ELINNAFIAAYAKCGSL+ AEHVFFGMNTK
Sbjct: 421 NLLPACLEETELLSLRALHGYSLRYSFQCDELINNAFIAAYAKCGSLISAEHVFFGMNTK 480

Query: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
           SVSSWNA++GG+AQNGDP KALDFYF+MTRLG LPDDFSI SLLLAC RLG LQYGKEIH
Sbjct: 481 SVSSWNAIVGGYAQNGDPRKALDFYFQMTRLGFLPDDFSIASLLLACARLGHLQYGKEIH 540

Query: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
           GFVLRNGLEM+SFVAVSLLSLY H SKP Y RTYFE MG+KN VCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMDSFVAVSLLSLYIHSSKPLYARTYFERMGNKNLVCWNAMLSGYSQNELPN 600

Query: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
           EALSLFR+MLS+ LE ++I+I SILGACSQLSALGLGKEVHCF LKN L+EDNFVACSLM
Sbjct: 601 EALSLFREMLSEQLETNKISIVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLM 660

Query: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
           DMYAKSG LG SQRIFNRLN KEVASWNVMITGFGVHGQGNKA+ELFE+M+RS KQPDRF
Sbjct: 661 DMYAKSGCLGQSQRIFNRLNAKEVASWNVMITGFGVHGQGNKAMELFEEMQRSGKQPDRF 720

Query: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
           TFLGVLQA CHAGLVSEGL YLAQM++LYKLEPELEHYACVIDMLGRAGRLNEALN IN+
Sbjct: 721 TFLGVLQAYCHAGLVSEGLYYLAQMKSLYKLEPELEHYACVIDMLGRAGRLNEALNLIND 780

Query: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
           MPEEPDAKIWSSLLSSS TY DLEMGEKFA KLLALEANK DSY+ +SNLYATAGKWD V
Sbjct: 781 MPEEPDAKIWSSLLSSSRTYGDLEMGEKFAGKLLALEANKTDSYVSISNLYATAGKWDHV 840

Query: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900
           RMVRQKMKDLSLQKD GCSWIELRGK+YSFIAGEN N SSDEIRKMWNRLEKQIVEIGYT
Sbjct: 841 RMVRQKMKDLSLQKDAGCSWIELRGKIYSFIAGENINTSSDEIRKMWNRLEKQIVEIGYT 900

Query: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960
           PD SCVLHELEEVEK K+LKGHSEK+AI FGFL TKEGTTLRISK+LRICRDCHNAAK+I
Sbjct: 901 PDSSCVLHELEEVEKIKMLKGHSEKLAISFGFLKTKEGTTLRISKSLRICRDCHNAAKFI 960

Query: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           SKAA+R+I+IRDNKRFHHFK G CSCGDYW
Sbjct: 961 SKAAERQIIIRDNKRFHHFKNGFCSCGDYW 983

[Close]

BLAST of CsaV3_1G003230 vs. NCBI nr
Match: KAG7023269.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1633.2 bits (4228), Expect = 0.0e+00
Identity = 813/991 (82.04%), Postives = 886/991 (89.40%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
           MAVVAP FS  +R+       PT     T  SILK SLL  S+PKSS+   S   Q+HQ+
Sbjct: 1   MAVVAPPFSCRYRA-------PTTIRKLTSSSILKCSLLLISSPKSSF---SVSAQTHQA 60

Query: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
           +S+  VS+LSLLEEI +LCEAGDLNGA DFLQR WKNN GYDL QRKEAMG+LLQKCGQ+
Sbjct: 61  QSIKLVSELSLLEEICELCEAGDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQF 120

Query: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
           K+VEIGR+LDEML VSSQFSGDFVLNTRLITMYS+CGYP ++RLVFDRL N+NLFQWNAL
Sbjct: 121 KDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNAL 180

Query: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
           VSGYVRNELYDEAIHTF+ELISVT FQPDNFT PCLIKACTGKCD+ LG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMG 240

Query: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
            IMDLFVGNAMI+LYGKCG +DEA+++FDKMPE+NLISWNSLI GFSEN  WLEA+ AFR
Sbjct: 241 FIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFR 300

Query: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
            LLES DGLIPDVAT+VTLLPVCSGEG+VD+GMVIHGMA+KLGLV ELMVCNAL+DMYSK
Sbjct: 301 RLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSK 360

Query: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
           CG LS+AA+LF KIENK+VVSWNSM+GAYSREGFV+ETF+LLRKMWMEEE+++VNEVTIL
Sbjct: 361 CGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTIL 420

Query: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
           NLLPAC+EE+ELLSLR LHGYSLRH FQY E INNAFIAAYAKCGSL  AEH+F GMNTK
Sbjct: 421 NLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTK 480

Query: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
           SVSSWNA+IGG+A NGDP KA DFYF M R G   D+FSI +LLLAC RL  LQYGKE+H
Sbjct: 481 SVSSWNAIIGGYAHNGDPQKAFDFYFRMRRSGYFLDEFSISTLLLACARLRHLQYGKEMH 540

Query: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
           GFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT+FE +  KNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPN 600

Query: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
           EA+SLFRQMLS+GL+P+EIA+AS+LGACS+LSAL LG+EVHCF LKN L+EDNFVACSLM
Sbjct: 601 EAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKNRLIEDNFVACSLM 660

Query: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
           DMYAKSG LG SQRIFN LN KE ASWNVMITGFGVHGQGNKAVELFE+M+R +KQPDRF
Sbjct: 661 DMYAKSGCLGRSQRIFNGLNEKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRF 720

Query: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
           TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGRAGRLNEALN INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINE 780

Query: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
           MPEEPDAKIWSSLLSSS TY DL MGEK AEKLLALEANKADSYILLSNLYATAGKWD+V
Sbjct: 781 MPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLV 840

Query: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGEN-SNPSSDEIRKMWNRLEKQIVEIGY 900
           RMVRQKMKDL+LQK  GCSWIEL GK YSFIAG + S   S+EIRKMWNRLEKQIVEIGY
Sbjct: 841 RMVRQKMKDLNLQKAAGCSWIELGGKTYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGY 900

Query: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
           TPD SCVLHELEE EK KILKGHSEK+AI FGFLNTKEGTTLRI KNLRICRDCHNAAK+
Sbjct: 901 TPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKF 960

Query: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           ISKAAKREI+IRDNKRFHHFK GICSCGDYW
Sbjct: 961 ISKAAKREIIIRDNKRFHHFKNGICSCGDYW 981

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot
Match: Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 1015.8 bits (2625), Expect = 3.4e-295
Identity = 499/972 (51.34%), Postives = 688/972 (70.78%), Query Frame = 0


Query: 24  PTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGD 83
           P P    +   + S   +S P++ Y        +  S S N  +    L  IS  CE GD
Sbjct: 7   PLPQVFVLFDYRRSRKESSFPRAVY--------NSNSISSNSTNANHFLRRISNFCETGD 66

Query: 84  LNGALDFLQRAWKNNAGYDLA--QRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSG 143
           L+ +   +Q    ++     A    +EA+G+LLQ  G+ K++E+GRK+ +++  S++   
Sbjct: 67  LDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRN 126

Query: 144 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 203
           D VL TR+ITMY++CG P +SR VFD L +KNLFQWNA++S Y RNELYDE + TF+E+I
Sbjct: 127 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 186

Query: 204 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 263
           S T+  PD+FT+PC+IKAC G  D+ +G +VHG+ VK GL+ D+FVGNA+++ YG  GF+
Sbjct: 187 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 246

Query: 264 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL-ESGDG-LIPDVATMVTL 323
            +A++LFD MPE+NL+SWNS+IR FS+NGF  E++     ++ E+GDG  +PDVAT+VT+
Sbjct: 247 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 306

Query: 324 LPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 383
           LPVC+ E  + +G  +HG AVKL L  EL++ NAL+DMYSKCGC++ A ++F+   NK+V
Sbjct: 307 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 366

Query: 384 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 443
           VSWN+M+G +S EG    TFD+LR+M    E ++ +EVTILN +P C  ES L SL+ LH
Sbjct: 367 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 426

Query: 444 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI 503
            YSL+  F Y EL+ NAF+A+YAKCGSL +A+ VF G+ +K+V+SWNA+IGGHAQ+ DP 
Sbjct: 427 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 486

Query: 504 KALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLL 563
            +LD + +M   G+LPD F++ SLL AC +L  L+ GKE+HGF++RN LE + FV +S+L
Sbjct: 487 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 546

Query: 564 SLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 623
           SLY HC +    +  F+ M DK+ V WN +++GY QN  P+ AL +FRQM+  G++   I
Sbjct: 547 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 606

Query: 624 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 683
           ++  + GACS L +L LG+E H +ALK+ L +D F+ACSL+DMYAK+G +  S ++FN L
Sbjct: 607 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 666

Query: 684 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 743
             K  ASWN MI G+G+HG   +A++LFE+M+R+   PD  TFLGVL AC H+GL+ EGL
Sbjct: 667 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 726

Query: 744 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI-NEMPEEPDAKIWSSLLSSSI 803
            YL QM++ + L+P L+HYACVIDMLGRAG+L++AL  +  EM EE D  IW SLLSS  
Sbjct: 727 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 786

Query: 804 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGC 863
            + +LEMGEK A KL  LE  K ++Y+LLSNLYA  GKW+ VR VRQ+M ++SL+KD GC
Sbjct: 787 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 846

Query: 864 SWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKI 923
           SWIEL  KV+SF+ GE      +EI+ +W+ LE +I ++GY PD   V H+L E EK + 
Sbjct: 847 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 906

Query: 924 LKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHH 983
           L+GHSEK+A+ +G + T EGTT+R+ KNLRIC DCHNAAK ISK  +REIV+RDNKRFHH
Sbjct: 907 LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 966

Query: 984 FKKGICSCGDYW 991
           FK G+CSCGDYW
Sbjct: 967 FKNGVCSCGDYW 970

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 609.0 bits (1569), Expect = 9.6e-173
Identity = 323/837 (38.59%), Postives = 498/837 (59.50%), Query Frame = 0


Query: 177 WNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMA 236
           W  L+   VR+ L  EA+ T++++I V   +PDN+ FP L+KA     D+ LGK +H   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 124

Query: 237 VKMGLIMD-LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 296
            K G  +D + V N ++ LY KCG      ++FD++ E+N +SWNSLI        W  A
Sbjct: 125 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 184

Query: 297 YRAFRSLLESGDGLIPDVATMVTLLPVCSG----EGNVDVGMVIHGMAVKLGLVHELMVC 356
             AFR +L+  + + P   T+V+++  CS     EG + +G  +H   ++ G ++  ++ 
Sbjct: 185 LEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGELNSFII- 244

Query: 357 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 416
           N L+ MY K G L+ + +L      + +V+WN+++ +  +   + E  + LR+M +E   
Sbjct: 245 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-- 304

Query: 417 MEVNEVTILNLLPACLEESELLSLRALHGYSLRH-SFQYKELINNAFIAAYAKCGSLVFA 476
           +E +E TI ++LPAC     L + + LH Y+L++ S      + +A +  Y  C  ++  
Sbjct: 305 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 364

Query: 477 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR-LGILPDDFSIVSLLLACGR 536
             VF GM  + +  WNA+I G++QN    +AL  +  M    G+L +  ++  ++ AC R
Sbjct: 365 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 424

Query: 537 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAM 596
            G     + IHGFV++ GL+ + FV  +L+ +Y    K       F  M D++ V WN M
Sbjct: 425 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 484

Query: 597 LSGYSQNELPNEALSLFRQM------LSDG-----LEPDEIAIASILGACSQLSALGLGK 656
           ++GY  +E   +AL L  +M      +S G     L+P+ I + +IL +C+ LSAL  GK
Sbjct: 485 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 544

Query: 657 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 716
           E+H +A+KN+L  D  V  +L+DMYAK G L  S+++F+++  K V +WNV+I  +G+HG
Sbjct: 545 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 604

Query: 717 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 776
            G +A++L   M     +P+  TF+ V  AC H+G+V EGL     M+  Y +EP  +HY
Sbjct: 605 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 664

Query: 777 ACVIDMLGRAGRLNEALNFINEMPEE-PDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE 836
           ACV+D+LGRAGR+ EA   +N MP +   A  WSSLL +S  + +LE+GE  A+ L+ LE
Sbjct: 665 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 724

Query: 837 ANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSN 896
            N A  Y+LL+N+Y++AG WD    VR+ MK+  ++K+ GCSWIE   +V+ F+AG++S+
Sbjct: 725 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 784

Query: 897 PSSDE----IRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFL 956
           P S++    +  +W R+ K+    GY PD SCVLH +EE EK  +L GHSEK+AI FG L
Sbjct: 785 PQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGIL 844

Query: 957 NTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           NT  GT +R++KNLR+C DCH A K+ISK   REI++RD +RFH FK G CSCGDYW
Sbjct: 845 NTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 596.7 bits (1537), Expect = 4.9e-169
Identity = 322/887 (36.30%), Postives = 503/887 (56.71%), Query Frame = 0


Query: 108 EAMGMLLQKCGQYKNVEIGRKLDEMLCVS-SQFSGDFVLNTRLITMYSICGYPLESRLVF 167
           EA   +L+ CG+ + V  GR+L   +  +   F  DF L  +L+ MY  CG   ++  VF
Sbjct: 81  EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVF 140

Query: 168 DRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 227
           D + ++  F WN ++  YV N     A+  +  +  V        +FP L+KAC    DI
Sbjct: 141 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDI 200

Query: 228 HLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ-NLISWNSLIRG 287
             G  +H + VK+G     F+ NA++++Y K   L  A  LFD   E+ + + WNS++  
Sbjct: 201 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 260

Query: 288 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL- 347
           +S +G  LE    FR +  +G    P+  T+V+ L  C G     +G  IH   +K    
Sbjct: 261 YSTSGKSLETLELFREMHMTGPA--PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 320

Query: 348 VHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRK 407
             EL VCNALI MY++CG + +A  + R++ N  VV+WNS+I  Y +     E  +    
Sbjct: 321 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 380

Query: 408 MWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKC 467
           M       + +EV++ +++ A    S LL+   LH Y ++H +     + N  I  Y+KC
Sbjct: 381 MIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 440

Query: 468 GSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL 527
               +    F  M+ K + SW  VI G+AQN   ++AL+ + ++ +  +  D+  + S+L
Sbjct: 441 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 500

Query: 528 LACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSV 587
            A   L  +   KEIH  +LR GL +++ +   L+ +Y  C    Y    FE++  K+ V
Sbjct: 501 RASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 560

Query: 588 CWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFA 647
            W +M+S  + N   +EA+ LFR+M+  GL  D +A+  IL A + LSAL  G+E+HC+ 
Sbjct: 561 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 620

Query: 648 LKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAV 707
           L+     +  +A +++DMYA  G L  ++ +F+R+  K +  +  MI  +G+HG G  AV
Sbjct: 621 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 680

Query: 708 ELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDM 767
           ELF+ M+  +  PD  +FL +L AC HAGL+ EG  +L  M+  Y+LEP  EHY C++DM
Sbjct: 681 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 740

Query: 768 LGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSY 827
           LGRA  + EA  F+  M  EP A++W +LL++  ++ + E+GE  A++LL LE     + 
Sbjct: 741 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 800

Query: 828 ILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIR 887
           +L+SN++A  G+W+ V  VR KMK   ++K  GCSWIE+ GKV+ F A + S+P S EI 
Sbjct: 801 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 860

Query: 888 KMWNRLEKQIV-EIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRI 947
           +  + + +++  E+GY  D   VLH ++E EK ++L GHSE++AI +G L T +   LRI
Sbjct: 861 EKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRI 920

Query: 948 SKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           +KNLR+CRDCH   K +SK  +R+IV+RD  RFHHF+ G+CSCGD W
Sbjct: 921 TKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.4e-162
Identity = 309/854 (36.18%), Postives = 495/854 (57.96%), Query Frame = 0


Query: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLL-NKNLFQWNALVSGYVRNELYDEAIHTFL 199
           S DF  + +LI  YS    P  S  VF R+   KN++ WN+++  + +N L+ EA+  F 
Sbjct: 37  SSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FY 96

Query: 200 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 259
             +  ++  PD +TFP +IKAC G  D  +G  V+   + MG   DLFVGNA++ +Y + 
Sbjct: 97  GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 156

Query: 260 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 319
           G L  A ++FD+MP ++L+SWNSLI G+S +G++ EA   +  L  S   ++PD  T+ +
Sbjct: 157 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS--WIVPDSFTVSS 216

Query: 320 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 379
           +LP       V  G  +HG A+K G+   ++V N L+ MY K    ++A  +F +++ + 
Sbjct: 217 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 276

Query: 380 VVSWNSMIGAYSREGFVFETFDLLRKMWMEE-ELMEVNEVTILNLLPACLEESELLSLRA 439
            VS+N+MI  Y +   V E+     +M++E  +  + + +T+ ++L AC    +L   + 
Sbjct: 277 SVSYNTMICGYLKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 336

Query: 440 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 499
           ++ Y L+  F  +  + N  I  YAKCG ++ A  VF  M  K   SWN++I G+ Q+GD
Sbjct: 337 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 396

Query: 500 PIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 559
            ++A+  +  M  +    D  + + L+    RL  L++GK +H   +++G+ ++  V+ +
Sbjct: 397 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA 456

Query: 560 LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 619
           L+ +Y  C +       F +MG  ++V WN ++S   +       L +  QM    + PD
Sbjct: 457 LIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPD 516

Query: 620 EIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN 679
                  L  C+ L+A  LGKE+HC  L+     +  +  +L++MY+K G L +S R+F 
Sbjct: 517 MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE 576

Query: 680 RLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 739
           R++ ++V +W  MI  +G++G+G KA+E F DM++S   PD   F+ ++ AC H+GLV E
Sbjct: 577 RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDE 636

Query: 740 GLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSS 799
           GL    +M+T YK++P +EHYACV+D+L R+ ++++A  FI  MP +PDA IW+S+L + 
Sbjct: 637 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 696

Query: 800 ITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVG 859
            T  D+E  E+ + +++ L  +     IL SN YA   KWD V ++R+ +KD  + K+ G
Sbjct: 697 RTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPG 756

Query: 860 CSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHEL-EEVEKR 919
            SWIE+   V+ F +G++S P S+ I K    L   + + GY PD   V   L EE EKR
Sbjct: 757 YSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKR 816

Query: 920 KILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRF 979
           +++ GHSE++AI FG LNT+ GT L++ KNLR+C DCH   K ISK   REI++RD  RF
Sbjct: 817 RLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRF 876

Query: 980 HHFKKGICSCGDYW 991
           H FK G CSC D W
Sbjct: 877 HLFKDGTCSCKDRW 882

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 563.5 bits (1451), Expect = 4.6e-159
Identity = 298/842 (35.39%), Postives = 473/842 (56.18%), Query Frame = 0


Query: 149  LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208
            LI +YS  G+   +R VFD L  K+   W A++SG  +NE   EAI  F ++  V    P
Sbjct: 228  LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMP 287

Query: 209  DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268
              + F  ++ AC     + +G+ +HG+ +K+G   D +V NA+++LY   G L  A  +F
Sbjct: 288  TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 347

Query: 269  DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328
              M +++ +++N+LI G S+ G+  +A   F+ +    DGL PD  T+ +L+  CS +G 
Sbjct: 348  SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM--HLDGLEPDSNTLASLVVACSADGT 407

Query: 329  VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
            +  G  +H    KLG      +  AL+++Y+KC  +  A   F + E ++VV WN M+ A
Sbjct: 408  LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 467

Query: 389  YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448
            Y     +  +F + R+M +EE  +  N+ T  ++L  C+   +L     +H   ++ +FQ
Sbjct: 468  YGLLDDLRNSFRIFRQMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 527

Query: 449  YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508
                + +  I  YAK G L  A  +      K V SW  +I G+ Q     KAL  + +M
Sbjct: 528  LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 587

Query: 509  TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568
               GI  D+  + + + AC  L  L+ G++IH     +G   +     +L++LY  C K 
Sbjct: 588  LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 647

Query: 569  FYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
                  FE     +++ WNA++SG+ Q+    EAL +F +M  +G++ +     S + A 
Sbjct: 648  EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 707

Query: 629  SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688
            S+ + +  GK+VH    K     +  V  +L+ MYAK G +  +++ F  ++ K   SWN
Sbjct: 708  SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 767

Query: 689  VMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748
             +I  +  HG G++A++ F+ M  S+ +P+  T +GVL AC H GLV +G+ Y   M + 
Sbjct: 768  AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 827

Query: 749  YKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEK 808
            Y L P+ EHY CV+DML RAG L+ A  FI EMP +PDA +W +LLS+ + + ++E+GE 
Sbjct: 828  YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 887

Query: 809  FAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVY 868
             A  LL LE   + +Y+LLSNLYA + KWD   + RQKMK+  ++K+ G SWIE++  ++
Sbjct: 888  AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 947

Query: 869  SFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAI 928
            SF  G+ ++P +DEI + +  L K+  EIGY  DC  +L+EL+  +K  I+  HSEK+AI
Sbjct: 948  SFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAI 1007

Query: 929  CFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGD 988
             FG L+      + + KNLR+C DCH   K++SK + REI++RD  RFHHF+ G CSC D
Sbjct: 1008 SFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKD 1064

Query: 989  YW 991
            YW
Sbjct: 1068 YW 1064

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL
Match: A0A0A0LPM0 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015040 PE=3 SV=1)

HSP 1 Score: 2006.1 bits (5196), Expect = 0.0e+00
Identity = 990/990 (100.00%), Postives = 990/990 (100.00%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
           MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS
Sbjct: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60

Query: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
           RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY
Sbjct: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120

Query: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
           KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180

Query: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
           VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240

Query: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
           LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300

Query: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
           SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360

Query: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
           CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420

Query: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
           NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480

Query: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
           SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540

Query: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
           GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600

Query: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
           EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660

Query: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
           DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720

Query: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
           TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780

Query: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
           MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840

Query: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900
           RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT
Sbjct: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYT 900

Query: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960
           PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI
Sbjct: 901 PDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYI 960

Query: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           SKAAKREIVIRDNKRFHHFKKGICSCGDYW
Sbjct: 961 SKAAKREIVIRDNKRFHHFKKGICSCGDYW 990

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL
Match: A0A5A7US76 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003290 PE=3 SV=1)

HSP 1 Score: 1865.1 bits (4830), Expect = 0.0e+00
Identity = 922/992 (92.94%), Postives = 951/992 (95.87%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYK--PTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSH 60
           MAVVAPLFSG HRSPIMYK  PTPTPTP PTPISI KNSLLSTSTPKSSYFFVS RTQ+H
Sbjct: 1   MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60

Query: 61  QSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCG 120
           QSRS+NPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMG LLQKCG
Sbjct: 61  QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120

Query: 121 QYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWN 180
           QYKNVEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYPLESRLVFDRL NKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180

Query: 181 ALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVK 240
           ALVSGYVRN+LYDEAIHTF+ELISVTEFQPDNFTFPCLIKACTGKCD+HLGKSVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240

Query: 241 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 300
           MGLIMDLFVGNAMI+LYGK GFLDEAVE+FDKMPEQNLISWNSLI GFSENGFWLEAYRA
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300

Query: 301 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 360
           FRSLLESGDGL PDVATMVTLLPVCSGEGNVD+GM+IHGMAVKLGLVHELMVCNALIDMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360

Query: 361 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 420
           SKCGCLSEAAILF KIENK+VVSWNSMIGAYSREGFVFETFDLLRKMW EE++ EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420

Query: 421 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 480
           ILN LPACLEE+ELLSL+ALHGYSLR SFQY+ELINN FIAAYAKCGSLV AEHVFFGMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480

Query: 481 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 540
           TKSVSSWNA+IG +AQNGDP KALDFYFEMTRLGILPDDFSIVSLLLACGRLG LQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540

Query: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 600
           IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT FE M +KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600

Query: 601 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 660
           PNE LS FRQMLS+GLEPDEI I S+LGACSQLSALGLGKEVHCF LKNSLMEDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660

Query: 661 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 720
           LMDMYAKSGFLGHSQ+IFN LN KEVASWNVMITGFGVHGQGNKAVELFEDM+RS+KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720

Query: 721 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI 780
           RFTFLGVLQACCHAGLVSEG+ YLAQMQTLYKLEPEL+HYACVIDMLGRAGRLNEALNFI
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780

Query: 781 NEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWD 840
           NEMPEEPDAKIWSSLLSSSIT+VDLEMGEKF EKLLALEANKADSYILLSNLYATAGKWD
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKWD 840

Query: 841 VVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900
           VVRMVRQKMKDLSLQKD GCSWIEL+GKVYSFIAGENSN SSDEIRKMWNRLEKQIVEIG
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEIG 900

Query: 901 YTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAK 960
           YTPDCSCVLHELEEVEK KILKGHSEK+AI FGFLNTKEGTTLRISKNLRICRDCHNAAK
Sbjct: 901 YTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAAK 960

Query: 961 YISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           YISKAAKREIVIRDNKRFHHFK GICSCG+YW
Sbjct: 961 YISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL
Match: A0A1S3BX48 (pentatricopeptide repeat-containing protein At1g18485 OS=Cucumis melo OX=3656 GN=LOC103494078 PE=3 SV=1)

HSP 1 Score: 1865.1 bits (4830), Expect = 0.0e+00
Identity = 922/992 (92.94%), Postives = 951/992 (95.87%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYK--PTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSH 60
           MAVVAPLFSG HRSPIMYK  PTPTPTP PTPISI KNSLLSTSTPKSSYFFVS RTQ+H
Sbjct: 1   MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60

Query: 61  QSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCG 120
           QSRS+NPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMG LLQKCG
Sbjct: 61  QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120

Query: 121 QYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWN 180
           QYKNVEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYPLESRLVFDRL NKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180

Query: 181 ALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVK 240
           ALVSGYVRN+LYDEAIHTF+ELISVTEFQPDNFTFPCLIKACTGKCD+HLGKSVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240

Query: 241 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 300
           MGLIMDLFVGNAMI+LYGK GFLDEAVE+FDKMPEQNLISWNSLI GFSENGFWLEAYRA
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300

Query: 301 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 360
           FRSLLESGDGL PDVATMVTLLPVCSGEGNVD+GM+IHGMAVKLGLVHELMVCNALIDMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360

Query: 361 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 420
           SKCGCLSEAAILF KIENK+VVSWNSMIGAYSREGFVFETFDLLRKMW EE++ EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420

Query: 421 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 480
           ILN LPACLEE+ELLSL+ALHGYSLR SFQY+ELINN FIAAYAKCGSLV AEHVFFGMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480

Query: 481 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 540
           TKSVSSWNA+IG +AQNGDP KALDFYFEMTRLGILPDDFSIVSLLLACGRLG LQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540

Query: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 600
           IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT FE M +KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600

Query: 601 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 660
           PNE LS FRQMLS+GLEPDEI I S+LGACSQLSALGLGKEVHCF LKNSLMEDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660

Query: 661 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 720
           LMDMYAKSGFLGHSQ+IFN LN KEVASWNVMITGFGVHGQGNKAVELFEDM+RS+KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720

Query: 721 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI 780
           RFTFLGVLQACCHAGLVSEG+ YLAQMQTLYKLEPEL+HYACVIDMLGRAGRLNEALNFI
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780

Query: 781 NEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWD 840
           NEMPEEPDAKIWSSLLSSSIT+VDLEMGEKF EKLLALEANKADSYILLSNLYATAGKWD
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKWD 840

Query: 841 VVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900
           VVRMVRQKMKDLSLQKD GCSWIEL+GKVYSFIAGENSN SSDEIRKMWNRLEKQIVEIG
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEIG 900

Query: 901 YTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAK 960
           YTPDCSCVLHELEEVEK KILKGHSEK+AI FGFLNTKEGTTLRISKNLRICRDCHNAAK
Sbjct: 901 YTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAAK 960

Query: 961 YISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           YISKAAKREIVIRDNKRFHHFK GICSCG+YW
Sbjct: 961 YISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL
Match: A0A5D3BGK5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00190 PE=3 SV=1)

HSP 1 Score: 1864.4 bits (4828), Expect = 0.0e+00
Identity = 922/992 (92.94%), Postives = 951/992 (95.87%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYK--PTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSH 60
           MAVVAPLFSG HRSPIMYK  PTPTPTP PTPISI KNSLLSTSTPKSSYFFVS RTQ+H
Sbjct: 1   MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60

Query: 61  QSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCG 120
           QSRS+NPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMG LLQKCG
Sbjct: 61  QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120

Query: 121 QYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWN 180
           QYKNVEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYPLESRLVFDRL NKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180

Query: 181 ALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVK 240
           ALVSGYVRN+LYDEAIHTF+ELISVTEFQPDNFTFPCLIKACTGKCD+HLGKSVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240

Query: 241 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 300
           MGLIMDLFVGNAMI+LYGK GFLDEAVE+FDKMPEQNLISWNSLI GFSENGFWLEAYRA
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300

Query: 301 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 360
           FRSLLESGDGL PDVATMVTLLPVCSGEGNVD+GM+IHGMAVKLGLVHELMVCNALIDMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360

Query: 361 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 420
           SKCGCLSEAAILF KIENK+VVSWNSMIGAYSREGFVFETFDLLRKMW EE++ EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420

Query: 421 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 480
           ILN LPACLEE+ELLSL+ALHGYSLR SFQY+ELINN FIAAYAKCGSLV AEHVFFGMN
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480

Query: 481 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 540
           TKSVSSWNA+IG +AQNGDP KALDFYFEMTRLGILPDDFSIVSLLLACGRLG LQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540

Query: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNEL 600
           IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT FE M +KNSVCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600

Query: 601 PNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS 660
           PNE LS FRQMLS+GLEPDEI I S+LGACSQLSALGLGKEVHCF LKNSLMEDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660

Query: 661 LMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPD 720
           LMDMYAKSGFLGHSQ+IFN LN KEVASWNVMITGFGVHGQGNKAVELFEDM+RS+KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720

Query: 721 RFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI 780
           RFTFLGVLQACCHAGLVSEG+ YLAQMQTLYKLEPEL+HYACVIDMLGRAGRLNEALNFI
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780

Query: 781 NEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWD 840
           NEMPEEPDAKIWSSLLSSSIT+VDLEMGEKF EKLLALEANKADSYILLSNLYATAGK D
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALEANKADSYILLSNLYATAGKRD 840

Query: 841 VVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900
           VVRMVRQKMKDLSLQKD GCSWIEL+GKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG
Sbjct: 841 VVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 900

Query: 901 YTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAK 960
           YTPDCSCVLHELEEVEK K+LKGHSEK+AI FGFLNTKEGTTLRISKNLRICRDCHNAAK
Sbjct: 901 YTPDCSCVLHELEEVEKIKVLKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAAK 960

Query: 961 YISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           YISKAAKREIVIRDNKRFHHFK GICSCGDYW
Sbjct: 961 YISKAAKREIVIRDNKRFHHFKNGICSCGDYW 992

[Close]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL
Match: A0A6J1E1F4 (pentatricopeptide repeat-containing protein At1g18485 OS=Cucurbita moschata OX=3662 GN=LOC111429727 PE=3 SV=1)

HSP 1 Score: 1632.8 bits (4227), Expect = 0.0e+00
Identity = 813/991 (82.04%), Postives = 886/991 (89.40%), Query Frame = 0


Query: 1   MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
           MAVVAP FS  +R+       PT     T  SILK SLL  S+PKSS+   S   Q+HQ+
Sbjct: 1   MAVVAPPFSCRYRA-------PTTIRKLTSSSILKCSLLLISSPKSSF---SVSAQTHQA 60

Query: 61  RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
           +S+  VS+LSLLEEI +LCEA DLNGA DFLQR WKNN GYDL QRKEAMG+LLQKCGQ+
Sbjct: 61  QSIKLVSELSLLEEICELCEASDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQF 120

Query: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
           K+VEIGR+LDEML VSSQFSGDFVLNTRLITMYS+CGYP ++RLVFDRL N+NLFQWNAL
Sbjct: 121 KDVEIGRELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNAL 180

Query: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
           VSGYVRNELYDEAIHTF+ELISVT FQPDNFT PCLIKACTGKCD+ LG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMG 240

Query: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
            IMDLFVGNAMI+LYGKCG +DEA+++FDKMPE+NLISWNSLI GFSEN  WLEA+ AFR
Sbjct: 241 FIMDLFVGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFR 300

Query: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
            LLES DGLIPDVAT+VTLLPVCSGEG+VD+GMVIHGMA+KLGLV ELMVCNAL+DMYSK
Sbjct: 301 RLLESSDGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSK 360

Query: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
           CG LS+AA+LF KIENK+VVSWNSM+GAYSREGFV+ETF+LLRKMWMEEE+++VNEVTIL
Sbjct: 361 CGYLSQAALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTIL 420

Query: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
           NLLPAC+EE+ELLSLR LHGYSLRH FQY E INNAFIAAYAKCGSL  AEH+F GMNTK
Sbjct: 421 NLLPACVEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTK 480

Query: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
           SVSSWNA+IGG+A NGDP KA DFYF M R G   DDFSI +LLLAC RL  LQYGKEIH
Sbjct: 481 SVSSWNAIIGGYAHNGDPRKAFDFYFRMRRSGYFLDDFSISTLLLACARLRHLQYGKEIH 540

Query: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
           GFVLRNGLEM+SFVAVSLLSLY HCSKPFY RT+FE +  KNSVCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPN 600

Query: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
           EA+SLFRQMLS+GL+P+EIA+AS+LGACS+LSAL LG+EVHCF LK+ L+EDNFVACSLM
Sbjct: 601 EAISLFRQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKSRLIEDNFVACSLM 660

Query: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
           DMYAKSG LG SQRIFN LN KE ASWNVMITGFGVHGQGNKAVELFE+M+R +KQPDRF
Sbjct: 661 DMYAKSGCLGRSQRIFNGLNKKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRF 720

Query: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
           TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGRAGRLNEALN INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINE 780

Query: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVV 840
           MPEEPDAKIWSSLLSSS TY DL MGEK AEKLLALEANKADSYILLSNLYATAGKWD+V
Sbjct: 781 MPEEPDAKIWSSLLSSSRTYGDLAMGEKAAEKLLALEANKADSYILLSNLYATAGKWDLV 840

Query: 841 RMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGEN-SNPSSDEIRKMWNRLEKQIVEIGY 900
           RMVRQKMKDL+LQK  GCSWIEL GK+YSFIAG + S   S+EIRKMWNRLEKQIVEIGY
Sbjct: 841 RMVRQKMKDLNLQKAAGCSWIELGGKIYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGY 900

Query: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
           TPD SCVLHELEE EK KILKGHSEK+AI FGFLNTKEGTTLRI KNLRICRDCHNAAK+
Sbjct: 901 TPDSSCVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKF 960

Query: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           ISKAAKREI+IRDNKRFHHFK GICSCGDYW
Sbjct: 961 ISKAAKREIIIRDNKRFHHFKNGICSCGDYW 981

[Close]

BLAST of CsaV3_1G003230 vs. TAIR 10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 1015.8 bits (2625), Expect = 2.4e-296
Identity = 499/972 (51.34%), Postives = 688/972 (70.78%), Query Frame = 0


Query: 24  PTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGD 83
           P P    +   + S   +S P++ Y        +  S S N  +    L  IS  CE GD
Sbjct: 7   PLPQVFVLFDYRRSRKESSFPRAVY--------NSNSISSNSTNANHFLRRISNFCETGD 66

Query: 84  LNGALDFLQRAWKNNAGYDLA--QRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSG 143
           L+ +   +Q    ++     A    +EA+G+LLQ  G+ K++E+GRK+ +++  S++   
Sbjct: 67  LDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRN 126

Query: 144 DFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELI 203
           D VL TR+ITMY++CG P +SR VFD L +KNLFQWNA++S Y RNELYDE + TF+E+I
Sbjct: 127 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 186

Query: 204 SVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFL 263
           S T+  PD+FT+PC+IKAC G  D+ +G +VHG+ VK GL+ D+FVGNA+++ YG  GF+
Sbjct: 187 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 246

Query: 264 DEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL-ESGDG-LIPDVATMVTL 323
            +A++LFD MPE+NL+SWNS+IR FS+NGF  E++     ++ E+GDG  +PDVAT+VT+
Sbjct: 247 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 306

Query: 324 LPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV 383
           LPVC+ E  + +G  +HG AVKL L  EL++ NAL+DMYSKCGC++ A ++F+   NK+V
Sbjct: 307 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 366

Query: 384 VSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALH 443
           VSWN+M+G +S EG    TFD+LR+M    E ++ +EVTILN +P C  ES L SL+ LH
Sbjct: 367 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 426

Query: 444 GYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPI 503
            YSL+  F Y EL+ NAF+A+YAKCGSL +A+ VF G+ +K+V+SWNA+IGGHAQ+ DP 
Sbjct: 427 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 486

Query: 504 KALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLL 563
            +LD + +M   G+LPD F++ SLL AC +L  L+ GKE+HGF++RN LE + FV +S+L
Sbjct: 487 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVL 546

Query: 564 SLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEI 623
           SLY HC +    +  F+ M DK+ V WN +++GY QN  P+ AL +FRQM+  G++   I
Sbjct: 547 SLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGI 606

Query: 624 AIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRL 683
           ++  + GACS L +L LG+E H +ALK+ L +D F+ACSL+DMYAK+G +  S ++FN L
Sbjct: 607 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 666

Query: 684 NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGL 743
             K  ASWN MI G+G+HG   +A++LFE+M+R+   PD  TFLGVL AC H+GL+ EGL
Sbjct: 667 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 726

Query: 744 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFI-NEMPEEPDAKIWSSLLSSSI 803
            YL QM++ + L+P L+HYACVIDMLGRAG+L++AL  +  EM EE D  IW SLLSS  
Sbjct: 727 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR 786

Query: 804 TYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGC 863
            + +LEMGEK A KL  LE  K ++Y+LLSNLYA  GKW+ VR VRQ+M ++SL+KD GC
Sbjct: 787 IHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGC 846

Query: 864 SWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKI 923
           SWIEL  KV+SF+ GE      +EI+ +W+ LE +I ++GY PD   V H+L E EK + 
Sbjct: 847 SWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQ 906

Query: 924 LKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHH 983
           L+GHSEK+A+ +G + T EGTT+R+ KNLRIC DCHNAAK ISK  +REIV+RDNKRFHH
Sbjct: 907 LRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHH 966

Query: 984 FKKGICSCGDYW 991
           FK G+CSCGDYW
Sbjct: 967 FKNGVCSCGDYW 970

[Close]

BLAST of CsaV3_1G003230 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 609.0 bits (1569), Expect = 6.8e-174
Identity = 323/837 (38.59%), Postives = 498/837 (59.50%), Query Frame = 0


Query: 177 WNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMA 236
           W  L+   VR+ L  EA+ T++++I V   +PDN+ FP L+KA     D+ LGK +H   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 124

Query: 237 VKMGLIMD-LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEA 296
            K G  +D + V N ++ LY KCG      ++FD++ E+N +SWNSLI        W  A
Sbjct: 125 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 184

Query: 297 YRAFRSLLESGDGLIPDVATMVTLLPVCSG----EGNVDVGMVIHGMAVKLGLVHELMVC 356
             AFR +L+  + + P   T+V+++  CS     EG + +G  +H   ++ G ++  ++ 
Sbjct: 185 LEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGELNSFII- 244

Query: 357 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 416
           N L+ MY K G L+ + +L      + +V+WN+++ +  +   + E  + LR+M +E   
Sbjct: 245 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-- 304

Query: 417 MEVNEVTILNLLPACLEESELLSLRALHGYSLRH-SFQYKELINNAFIAAYAKCGSLVFA 476
           +E +E TI ++LPAC     L + + LH Y+L++ S      + +A +  Y  C  ++  
Sbjct: 305 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 364

Query: 477 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTR-LGILPDDFSIVSLLLACGR 536
             VF GM  + +  WNA+I G++QN    +AL  +  M    G+L +  ++  ++ AC R
Sbjct: 365 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 424

Query: 537 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAM 596
            G     + IHGFV++ GL+ + FV  +L+ +Y    K       F  M D++ V WN M
Sbjct: 425 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 484

Query: 597 LSGYSQNELPNEALSLFRQM------LSDG-----LEPDEIAIASILGACSQLSALGLGK 656
           ++GY  +E   +AL L  +M      +S G     L+P+ I + +IL +C+ LSAL  GK
Sbjct: 485 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 544

Query: 657 EVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHG 716
           E+H +A+KN+L  D  V  +L+DMYAK G L  S+++F+++  K V +WNV+I  +G+HG
Sbjct: 545 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 604

Query: 717 QGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHY 776
            G +A++L   M     +P+  TF+ V  AC H+G+V EGL     M+  Y +EP  +HY
Sbjct: 605 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 664

Query: 777 ACVIDMLGRAGRLNEALNFINEMPEE-PDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE 836
           ACV+D+LGRAGR+ EA   +N MP +   A  WSSLL +S  + +LE+GE  A+ L+ LE
Sbjct: 665 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 724

Query: 837 ANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSN 896
            N A  Y+LL+N+Y++AG WD    VR+ MK+  ++K+ GCSWIE   +V+ F+AG++S+
Sbjct: 725 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 784

Query: 897 PSSDE----IRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFL 956
           P S++    +  +W R+ K+    GY PD SCVLH +EE EK  +L GHSEK+AI FG L
Sbjct: 785 PQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGIL 844

Query: 957 NTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 991
           NT  GT +R++KNLR+C DCH A K+ISK   REI++RD +RFH FK G CSCGDYW
Sbjct: 845 NTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]

BLAST of CsaV3_1G003230 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 573.9 bits (1478), Expect = 2.4e-163
Identity = 309/854 (36.18%), Postives = 495/854 (57.96%), Query Frame = 0


Query: 140 SGDFVLNTRLITMYSICGYPLESRLVFDRLL-NKNLFQWNALVSGYVRNELYDEAIHTFL 199
           S DF  + +LI  YS    P  S  VF R+   KN++ WN+++  + +N L+ EA+  F 
Sbjct: 37  SSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FY 96

Query: 200 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 259
             +  ++  PD +TFP +IKAC G  D  +G  V+   + MG   DLFVGNA++ +Y + 
Sbjct: 97  GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 156

Query: 260 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 319
           G L  A ++FD+MP ++L+SWNSLI G+S +G++ EA   +  L  S   ++PD  T+ +
Sbjct: 157 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS--WIVPDSFTVSS 216

Query: 320 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 379
           +LP       V  G  +HG A+K G+   ++V N L+ MY K    ++A  +F +++ + 
Sbjct: 217 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 276

Query: 380 VVSWNSMIGAYSREGFVFETFDLLRKMWMEE-ELMEVNEVTILNLLPACLEESELLSLRA 439
            VS+N+MI  Y +   V E+     +M++E  +  + + +T+ ++L AC    +L   + 
Sbjct: 277 SVSYNTMICGYLKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 336

Query: 440 LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGD 499
           ++ Y L+  F  +  + N  I  YAKCG ++ A  VF  M  K   SWN++I G+ Q+GD
Sbjct: 337 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 396

Query: 500 PIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVS 559
            ++A+  +  M  +    D  + + L+    RL  L++GK +H   +++G+ ++  V+ +
Sbjct: 397 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA 456

Query: 560 LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 619
           L+ +Y  C +       F +MG  ++V WN ++S   +       L +  QM    + PD
Sbjct: 457 LIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPD 516

Query: 620 EIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFN 679
                  L  C+ L+A  LGKE+HC  L+     +  +  +L++MY+K G L +S R+F 
Sbjct: 517 MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE 576

Query: 680 RLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 739
           R++ ++V +W  MI  +G++G+G KA+E F DM++S   PD   F+ ++ AC H+GLV E
Sbjct: 577 RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDE 636

Query: 740 GLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSS 799
           GL    +M+T YK++P +EHYACV+D+L R+ ++++A  FI  MP +PDA IW+S+L + 
Sbjct: 637 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 696

Query: 800 ITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVG 859
            T  D+E  E+ + +++ L  +     IL SN YA   KWD V ++R+ +KD  + K+ G
Sbjct: 697 RTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPG 756

Query: 860 CSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHEL-EEVEKR 919
            SWIE+   V+ F +G++S P S+ I K    L   + + GY PD   V   L EE EKR
Sbjct: 757 YSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKR 816

Query: 920 KILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRF 979
           +++ GHSE++AI FG LNT+ GT L++ KNLR+C DCH   K ISK   REI++RD  RF
Sbjct: 817 RLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRF 876

Query: 980 HHFKKGICSCGDYW 991
           H FK G CSC D W
Sbjct: 877 HLFKDGTCSCKDRW 882

[Close]

BLAST of CsaV3_1G003230 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 563.5 bits (1451), Expect = 3.3e-160
Identity = 298/842 (35.39%), Postives = 473/842 (56.18%), Query Frame = 0


Query: 149  LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208
            LI +YS  G+   +R VFD L  K+   W A++SG  +NE   EAI  F ++  V    P
Sbjct: 228  LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY-VLGIMP 287

Query: 209  DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268
              + F  ++ AC     + +G+ +HG+ +K+G   D +V NA+++LY   G L  A  +F
Sbjct: 288  TPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF 347

Query: 269  DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328
              M +++ +++N+LI G S+ G+  +A   F+ +    DGL PD  T+ +L+  CS +G 
Sbjct: 348  SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM--HLDGLEPDSNTLASLVVACSADGT 407

Query: 329  VDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA 388
            +  G  +H    KLG      +  AL+++Y+KC  +  A   F + E ++VV WN M+ A
Sbjct: 408  LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 467

Query: 389  YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQ 448
            Y     +  +F + R+M +EE  +  N+ T  ++L  C+   +L     +H   ++ +FQ
Sbjct: 468  YGLLDDLRNSFRIFRQMQIEE--IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 527

Query: 449  YKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEM 508
                + +  I  YAK G L  A  +      K V SW  +I G+ Q     KAL  + +M
Sbjct: 528  LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 587

Query: 509  TRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKP 568
               GI  D+  + + + AC  L  L+ G++IH     +G   +     +L++LY  C K 
Sbjct: 588  LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 647

Query: 569  FYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGAC 628
                  FE     +++ WNA++SG+ Q+    EAL +F +M  +G++ +     S + A 
Sbjct: 648  EESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAA 707

Query: 629  SQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWN 688
            S+ + +  GK+VH    K     +  V  +L+ MYAK G +  +++ F  ++ K   SWN
Sbjct: 708  SETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWN 767

Query: 689  VMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTL 748
             +I  +  HG G++A++ F+ M  S+ +P+  T +GVL AC H GLV +G+ Y   M + 
Sbjct: 768  AIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSE 827

Query: 749  YKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEK 808
            Y L P+ EHY CV+DML RAG L+ A  FI EMP +PDA +W +LLS+ + + ++E+GE 
Sbjct: 828  YGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEF 887

Query: 809  FAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVY 868
             A  LL LE   + +Y+LLSNLYA + KWD   + RQKMK+  ++K+ G SWIE++  ++
Sbjct: 888  AAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 947

Query: 869  SFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAI 928
            SF  G+ ++P +DEI + +  L K+  EIGY  DC  +L+EL+  +K  I+  HSEK+AI
Sbjct: 948  SFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAI 1007

Query: 929  CFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGD 988
             FG L+      + + KNLR+C DCH   K++SK + REI++RD  RFHHF+ G CSC D
Sbjct: 1008 SFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKD 1064

Query: 989  YW 991
            YW
Sbjct: 1068 YW 1064

[Close]

BLAST of CsaV3_1G003230 vs. TAIR 10
Match: AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 543.1 bits (1398), Expect = 4.6e-154
Identity = 289/829 (34.86%), Postives = 467/829 (56.33%), Query Frame = 0


Query: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
           +FD+   ++   + +L+ G+ R+    EA   FL  I     + D   F  ++K     C
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGMEMDCSIFSSVLKVSATLC 108

Query: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
           D   G+ +H   +K G + D+ VG +++  Y K     +  ++FD+M E+N+++W +LI 
Sbjct: 109 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 168

Query: 285 GFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL 344
           G++ N    E    F  +    +G  P+  T    L V + EG    G+ +H + VK GL
Sbjct: 169 GYARNSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 228

Query: 345 VHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRK 404
              + V N+LI++Y KCG + +A ILF K E KSVV+WNSMI  Y+  G   E   +   
Sbjct: 229 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 288

Query: 405 MWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKC 464
           M +    + ++E +  +++  C    EL     LH   +++ F + + I  A + AY+KC
Sbjct: 289 MRL--NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 348

Query: 465 GSLVFAEHVFFGMN-TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSL 524
            +++ A  +F  +    +V SW A+I G  QN    +A+D + EM R G+ P++F+   +
Sbjct: 349 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 408

Query: 525 LLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNS 584
           L A   +       E+H  V++   E +S V  +LL  Y    K       F  + DK+ 
Sbjct: 409 LTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 468

Query: 585 VCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA-LGLGKEVHC 644
           V W+AML+GY+Q      A+ +F ++   G++P+E   +SIL  C+  +A +G GK+ H 
Sbjct: 469 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 528

Query: 645 FALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNK 704
           FA+K+ L     V+ +L+ MYAK G +  ++ +F R   K++ SWN MI+G+  HGQ  K
Sbjct: 529 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 588

Query: 705 AVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVI 764
           A+++F++MK+   + D  TF+GV  AC HAGLV EG  Y   M    K+ P  EH +C++
Sbjct: 589 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 648

Query: 765 DMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKAD 824
           D+  RAG+L +A+  I  MP    + IW ++L++   +   E+G   AEK++A++   + 
Sbjct: 649 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 708

Query: 825 SYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDE 884
           +Y+LLSN+YA +G W     VR+ M + +++K+ G SWIE++ K YSF+AG+ S+P  D+
Sbjct: 709 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 768

Query: 885 IRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLR 944
           I      L  ++ ++GY PD S VL ++++  K  +L  HSE++AI FG + T +G+ L 
Sbjct: 769 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 828

Query: 945 ISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKK-GICSCGDYW 991
           I KNLR+C DCH   K I+K  +REIV+RD+ RFHHF   G+CSCGD+W
Sbjct: 829 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868

The following BLAST results are available for this feature:

BLAST of CsaV3_1G003230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138210.2	0.0e+00	100.00	pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >XP_0317...	[more]
XP_008453326.1	0.0e+00	92.94	PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo] ...	[more]
TYJ98247.1	0.0e+00	92.94	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038880056.1	0.0e+00	87.27	pentatricopeptide repeat-containing protein At1g18485 [Benincasa hispida]	[more]
KAG7023269.1	0.0e+00	82.04	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of CsaV3_1G003230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WN60	3.4e-295	51.34	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
Q7Y211	9.6e-173	38.59	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
Q9M1V3	4.9e-169	36.30	Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop...	[more]
Q9SS60	3.4e-162	36.18	Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX...	[more]
Q9SVP7	4.6e-159	35.39	Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_1G003230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPM0	0.0e+00	100.00	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0150...	[more]
A0A5A7US76	0.0e+00	92.94	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BX48	0.0e+00	92.94	pentatricopeptide repeat-containing protein At1g18485 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3BGK5	0.0e+00	92.94	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1E1F4	0.0e+00	82.04	pentatricopeptide repeat-containing protein At1g18485 OS=Cucurbita moschata OX=3...	[more]

BLAST of CsaV3_1G003230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18485.1	2.4e-296	51.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	6.8e-174	38.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G03580.1	2.4e-163	36.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G13650.1	3.3e-160	35.39	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G27610.1	4.6e-154	34.86	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 177..201 e-value: 0.0041 score: 17.3 coord: 758..783 e-value: 0.011 score: 15.9 coord: 380..406 e-value: 3.2E-5 score: 23.9 coord: 351..377 e-value: 0.0027 score: 17.8 coord: 484..513 e-value: 1.5E-6 score: 28.0 coord: 249..275 e-value: 3.2E-6 score: 27.0 coord: 277..306 e-value: 1.4E-4 score: 21.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 683..731 e-value: 4.3E-12 score: 46.0 coord: 581..628 e-value: 3.1E-10 score: 40.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 249..275 e-value: 2.9E-4 score: 18.8 coord: 758..783 e-value: 0.0012 score: 16.9 coord: 686..718 e-value: 2.2E-6 score: 25.5 coord: 380..407 e-value: 0.001 score: 17.1 coord: 584..618 e-value: 4.6E-9 score: 33.9 coord: 484..516 e-value: 1.4E-6 score: 26.1 coord: 277..306 e-value: 6.7E-4 score: 17.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 481..515 score: 10.939435
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 173..208 score: 8.79102
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 683..717 score: 10.862706
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 244..278 score: 10.380408
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 347..381 score: 8.637562
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 582..616 score: 12.890547
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 229..333 e-value: 5.7E-21 score: 76.7 coord: 50..228 e-value: 8.2E-13 score: 50.1 coord: 334..434 e-value: 7.3E-16 score: 60.0 coord: 435..538 e-value: 3.4E-14 score: 54.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 546..638 e-value: 2.5E-7 score: 32.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 639..890 e-value: 7.2E-34 score: 119.5
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 857..980 e-value: 2.7E-39 score: 133.9
None	No IPR available	PANTHER	PTHR47928:SF105	PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN	coord: 138..329
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 138..329
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 331..426 coord: 429..978
None	No IPR available	PANTHER	PTHR47928:SF105	PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN	coord: 331..426 coord: 429..978

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G003230.1	CsaV3_1G003230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding