CsaV3_1G002990 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G002990
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Transcription factor TCP5
Location	chr1: 1878119 .. 1880884 (+)
RNA-Seq Expression	CsaV3_1G002990
Synteny	CsaV3_1G002990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATATTTATACCTTATTTAAATTTCCCATTGGTACTGTCATATACTGATGGATAATTAATGATTCAAGTTGGTAAAATTAGAAACCAAAACTTTGAATTCTAAAATTCACATACTCGAAAAGATCTCGGGCGTATGATGAAAGTGCTTAAGAATGTGTACGTAAACCTTATCAAAATAATTTAGGTGCGTCTATTATTGATCCCGCGGCCCTTAGTATATTGTCAAAAAAATCAGTAAATGTATACGACAACTCGGAGTATTGTTTTTTTTTTTTTTGGTAGTTTCTCTTTTCATACCCCAAGTGCAAAACTATTTAGTCATATTATAGTTTCCATTTTAGAATAAATTCTCTAAATCTGGGATAGATTTTGTATCCCTTTTGGATGTTTATATGAAGATATATCTACGTCGAAATGACGAAACTATCATTCGCACTAGTCTATGTTGTTATTTTATTGAGAAAAACCCTGCCACGTGGTCGAGAACACACCTTACCTTTTCCTTTTTCTATCTTTGACAATATATGCAATATGGTAAGGGTTAAATAAATTCTTGGCACCTTCTTTCCTTTACTCATCATATTGTCATTTCTTGTGTTAAAGTTTTGATTCCTTGCAAAGAAGAGAAGTTTTAAGAGTGTAATTTACTCTTAAAAAAACTCATCTTGTTGTGTGTTTCCTCCATCGGCGCAATATATAAAATCTCCCCCTTCTCCCTTCTCTTCTTCTTCTTTTTCTTCATCTTCTTCCACACAACCAAAGAAAAAGCTCATTAATTTGAAGGCCAACAACTGAAATTAGAGTTCAGAAGAGCTTCAGCTTTGGAGGTTTTGGTAAATTTCAAATAATGTAAGTTCATTATTTCCCTTTTAATGCACACACACAATTGAACTAATATTGTTTAAGAATATGGTTCTTTTATCTTGAAGAGCTTTCCCAATGGATCTGAGAGGTATGGTTTAACTATTCATTATATTCTCTTTAGAATTGAGATATTCGGCTGCACTCCTTACTGATGTATAGTTCTGATCCTTTCTACTTTCTTTCCATTTTTTCTTCTGTTATCAGCTTATACAAACTTGTTTTCTCTCAAATCATTACAGCTTGGATGACCCAAAAAAGCAAAAATCTCTTTGGATCAGTTGGGATTTTTTGAAGGATTGATTGATAAAATGGAGGGGAAAATGATGAACATTTGGTGATGATATATGAAATTATAAGGATATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAGATCAGGATCGATGAAGCCAAGAAGCTAAAGGAGGGGATCACAATTATGTATCATCCCTAGCTAGTTCATCCTTAGATGAAGATCAGATCAAAGTTGTTCAATCTATAATAATATTTTAAAGTTTTCTTCAATTAATTCTCTCTAAGTCCCTTTTGGATTTGTTCAGAATACAAAAGTCTGATTGTTAGATGTAAACTCTCTTTAAATTAGATATTTGATATTTTTGAATATATACCATCAGTTGAATATATGTATACATTTTACTTTTTATGAATCAGTATCAAAGTTTTTGTTGATGAATATCAATTGATT

mRNA sequence

ATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAG

Coding sequence (CDS)

ATGTTGAGGAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATAATGATGGAAAATACAGTTTCCCAAAGGCTCCAACAAGCAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCCTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTTTTACAAGACAAAGCAGGATCAGCGACGACCGCAGCAACGACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAACAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATAATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTAGTTGAGACTGCAGCTCAAGGAAGTAATTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCGTATGCTTCATATATTACCAATCCATTTGAAAGCCATATCCATTTCCTGAGCTCAAATTCTCATGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCCGGTGGCAGCGCCGGCGCTGGCTCTTCCGCCAAAGACGGGGCGGCCGGGAACTCGTAG

Protein sequence

MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKSTDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS*

Homology

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BLAST of CsaV3_1G002990 vs. NCBI nr
Match: XP_011648477.1 (transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa_014083 [Cucumis sativus])

HSP 1 Score: 784.6 bits (2025), Expect = 4.0e-223
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180
           LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
           TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300
           QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG
Sbjct: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300

Query: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH
Sbjct: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

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BLAST of CsaV3_1G002990 vs. NCBI nr
Match: KAA0057999.1 (transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 724.9 bits (1870), Expect = 3.8e-205
Identity = 387/412 (93.93%), Postives = 395/412 (95.87%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT     SSSSSSSSRFCNS PPPFMLDVK
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT-----SSSSSSSSRFCNSQPPPFMLDVK 180

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 181 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240

Query: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD-HNHRQQPSCLSLSQFGNNNNS 300
           EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD H+HRQQPSCLSLSQFGNNNNS
Sbjct: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNS 300

Query: 301 NGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           NG+FPSQLVE A   ++SSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 301 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 360

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

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BLAST of CsaV3_1G002990 vs. NCBI nr
Match: XP_008453284.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 724.9 bits (1870), Expect = 3.8e-205
Identity = 387/412 (93.93%), Postives = 395/412 (95.87%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT     SSSSSSSSRFCNS PPPFMLDVK
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT-----SSSSSSSSRFCNSQPPPFMLDVK 188

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 189 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 248

Query: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD-HNHRQQPSCLSLSQFGNNNNS 300
           EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD H+HRQQPSCLSLSQFGNNNNS
Sbjct: 249 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNS 308

Query: 301 NGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           NG+FPSQLVE A   ++SSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 309 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of CsaV3_1G002990 vs. NCBI nr
Match: XP_038879592.1 (transcription factor TCP5-like [Benincasa hispida])

HSP 1 Score: 587.4 bits (1513), Expect = 9.4e-164
Identity = 339/416 (81.49%), Postives = 353/416 (84.86%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRNNS  +KGCEAKEEG+    SSNNN+DGKYSF KA ++SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSSKEKGCEAKEEGI---RSSNNNDDGKYSFSKAASTSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPP-----FM 180
           LPPLQIPPGFSPFHQQMLFPQY DPHHHYY       S+SSSSSR CNSLPPP     F 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQY-DPHHHYY-------STSSSSSRLCNSLPPPPPPPSFA 180

Query: 181 LDVKSTDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQV 240
           LDVK  DAYQTTMTVEKTKLWD+DL  LQ+KA +ATTA  TTKGKWIDGSN  + ++QQV
Sbjct: 181 LDVKGIDAYQTTMTVEKTKLWDVDLG-LQEKAAAATTA--TTKGKWIDGSN--TTNSQQV 240

Query: 241 EDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNN 300
           EDYNEQISSQKLLSMAICSSNLPNMM NNNSTPYNNYN           SCLSLSQFGNN
Sbjct: 241 EDYNEQISSQKLLSMAICSSNLPNMM-NNNSTPYNNYN-----------SCLSLSQFGNN 300

Query: 301 NN-SNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHA-LSNP 360
           NN  NG FPSQLVE AAQ S SSSS+SSLFFTPYASYITNPFESHIHFLSSNSH  LSNP
Sbjct: 301 NNDDNGNFPSQLVEAAAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHVNLSNP 360

Query: 361 FM-SSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           FM +SSLHPFA SQNLKPFPPPSFNLKQL HAAD N  G  AGA SSAKDGAA NS
Sbjct: 361 FMPNSSLHPFA-SQNLKPFPPPSFNLKQLLHAADNNPGGSRAGASSSAKDGAAENS 387

[Close]

BLAST of CsaV3_1G002990 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.2 bits (1071), Expect = 1.7e-112
Identity = 264/408 (64.71%), Postives = 281/408 (68.87%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180
           LPPLQIP GFSPFHQQMLFP Y D HHHY     SSSSSSSSSS+FCNSLPPPF +D+K 
Sbjct: 121 LPPLQIPTGFSPFHQQMLFPPY-DHHHHY-----SSSSSSSSSSQFCNSLPPPFAVDMKG 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
                   ++EKTK+WDMDLA LQ KA S       TKGKWIDGS+N     Q VEDY  
Sbjct: 181 D-------SIEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSN-----QHVEDY-- 240

Query: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300
                                   N TPYN YNS               SQFGNN   NG
Sbjct: 241 ------------------------NFTPYNTYNS---------------SQFGNN---NG 300

Query: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           VFPSQ+     +   SSSS+S+LFFTPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 VFPSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 311

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFA SQNLKPF   SFN KQL HAAD N      GA  S KDG AG+S
Sbjct: 361 PFA-SQNLKPFSAASFNFKQLLHAADAN------GADPSNKDGTAGDS 311

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.8e-39
Identity = 135/358 (37.71%), Postives = 182/358 (50.84%), Query Frame = 0


Query: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQW-SGFRNPRIVRVSRS 61
           +R+   D++  +AK+E    ++   N N        +  SSSRQW S FRNPRIVRVSR+
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 62  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 121
           FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLL+  K D+D 
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

Query: 122 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 181
           LPPLQ P GF+  +  ++F       +  +  S SS++S++        L    +     
Sbjct: 121 LPPLQFPHGFNQMYPNLIF------GNSGFGESPSSTTSTTFPGTNLGFLENWDLGGSSR 180

Query: 182 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 241
           T A  T  T  + + +D+D                  KGKWI    ND NS Q  + +N 
Sbjct: 181 TRARLTDTTTTQRESFDLD------------------KGKWI---KNDENSNQDHQGFNT 240

Query: 242 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNN----- 301
               Q  L                 + PYNN ++ ++  H QQ    SL Q GNN     
Sbjct: 241 NHQQQFPL-----------------TNPYNNTSAYYNLGHLQQ----SLDQSGNNVTVAI 300

Query: 302 -----NNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSH 349
                NN+N +            S+S+   S LFF P    +++ F ++  FL ++ H
Sbjct: 301 SNVAANNNNNL-------NLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.8e-32
Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 49  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 108
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 109 WLLDVTKLDIDNLPPLQIPPGF 131
           WLL+V K D+D LPPLQ PPGF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.9e-32
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 6   SKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPT---SSSRQWSGFRNPRIVRVSRSFG 65
           ++ ++  +  +E   VR++S     GK    K PT   SSS  W   ++PRIVRVSR+FG
Sbjct: 19  TRREREVKEDQEETEVRATS-----GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFG 78

Query: 66  GKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLP 125
           GKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LP
Sbjct: 79  GKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELP 138

Query: 126 PLQI-PPGFSPFHQQMLF 140
           PL I P  FS F+    F
Sbjct: 139 PLPISPENFSIFNHHQSF 151

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.3e-18
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 35  FPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDL 94
           F +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDL
Sbjct: 23  FSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDL 82

Query: 95  QDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSS 154
           QD+L   QPSK ++WL++     I +LP L      + F        ++D + +   S+ 
Sbjct: 83  QDRLGFDQPSKAVEWLINAASDSITDLPLLN-----TNF-------DHLDQNQNQTKSAC 137

Query: 155 SSSSSSSS 163
           SS +S SS
Sbjct: 143 SSGTSESS 137

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-11
Identity = 84/304 (27.63%), Postives = 139/304 (45.72%), Query Frame = 0


Query: 27  NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVP 86
           NNN+G     +     SR W    + RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV 
Sbjct: 8   NNNNGDVVDNEVNNRLSR-WH-HNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVS 67

Query: 87  TAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPH 146
           TA+Q YDLQD+L   QPSK ++WL+   +  I  LP L              FP   D +
Sbjct: 68  TALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSL----------NNTHFPT-DDEN 127

Query: 147 HHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKSTDAYQTTMTVEKTKLWDMDLAVLQDK 206
           H   T ++ +++S S S+   NS           T    + +++ +++L D      +++
Sbjct: 128 HQNQTLTTVAANSLSKSACSSNS----------DTSKNSSGLSLSRSELRDKARERARER 187

Query: 207 AGSATTAATTTKGKWIDGSNNDS---NSTQQVEDYNEQISSQKLLSMAIC-----SSNLP 266
               T         + D  N+ S   NS +Q        S  +  S  +       ++ P
Sbjct: 188 TAKETKERDHNHTSFTDLLNSGSDPVNSNRQWMASAPSSSPMEYFSSGLILGSGQQTHFP 247

Query: 267 NMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNGVFPSQLVETAAQGSNSSS 323
              N++  +  ++++  H H+  Q+ S +         ++ G F      +   G+ ++ 
Sbjct: 248 ISTNSHPFSSISDHHHHHPHHQHQEFSFVPDHLISPAESNGGAFNLDFNMSTPSGAGAAV 288

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 1.9e-223
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180
           LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
           TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300
           QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG
Sbjct: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300

Query: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH
Sbjct: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 387/412 (93.93%), Postives = 395/412 (95.87%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT     SSSSSSSSRFCNS PPPFMLDVK
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT-----SSSSSSSSRFCNSQPPPFMLDVK 188

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 189 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 248

Query: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD-HNHRQQPSCLSLSQFGNNNNS 300
           EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD H+HRQQPSCLSLSQFGNNNNS
Sbjct: 249 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNS 308

Query: 301 NGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           NG+FPSQLVE A   ++SSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 309 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 368

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 369 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL
Match: A0A5A7UWW8 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003030 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 1.8e-205
Identity = 387/412 (93.93%), Postives = 395/412 (95.87%), Query Frame = 0


Query: 1   MLRN-NSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60
           MLRN NSKDQKG EAKEEG+ +RSSS+NNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVK 180
           NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT     SSSSSSSSRFCNS PPPFMLDVK
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYT-----SSSSSSSSRFCNSQPPPFMLDVK 180

Query: 181 STDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240
           STDAYQTTMTVEKTKLWDMDLAVL +KAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN
Sbjct: 181 STDAYQTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYN 240

Query: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD-HNHRQQPSCLSLSQFGNNNNS 300
           EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHD H+HRQQPSCLSLSQFGNNNNS
Sbjct: 241 EQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNS 300

Query: 301 NGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS-NPFMSS 360
           NG+FPSQLVE A   ++SSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALS NPFMSS
Sbjct: 301 NGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSS 360

Query: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADT-NNAGGSAGAGSSAKDGAAGNS 409
           SLHPFATSQNLKPFPPPSFNLKQLFHAADT NNAGGSAGAGSSAKDGAAGNS
Sbjct: 361 SLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 9.0e-112
Identity = 263/408 (64.46%), Postives = 280/408 (68.63%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPT SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPT-SSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180
           LPPLQIP GFSPFHQQMLFP Y D HHHY    SSSSSSSSSSS+FCNSLPPPF +D+K 
Sbjct: 121 LPPLQIPTGFSPFHQQMLFPPY-DHHHHY----SSSSSSSSSSSQFCNSLPPPFAVDMKG 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
                   ++EKTK+WDMDLA LQ KA S       TKGKWIDGS+N     Q VEDY  
Sbjct: 181 D-------SIEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSN-----QHVEDY-- 240

Query: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300
                                   N TPYN YNS               SQFGNN   NG
Sbjct: 241 ------------------------NFTPYNTYNS---------------SQFGNN---NG 300

Query: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           VFPSQ+     +   SSSS+S+LFFTPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 VFPSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 312

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFA SQNLKPF   SFN KQL HAAD N      G   S KDG AG+S
Sbjct: 361 PFA-SQNLKPFSAASFNFKQLLHAADGN------GTDRSNKDGTAGDS 312

[Close]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111
Identity = 260/408 (63.73%), Postives = 280/408 (68.63%), Query Frame = 0


Query: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEE             GKY FPKAPTSSS QWSGFRNPRIVRVSRS
Sbjct: 1   MLRNSK--EKGFESKEE-------------GKYRFPKAPTSSS-QWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120

Query: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180
           LPPLQIP GFSPFHQQM FP Y D HHH++        SSSSSS+FCNSLPPPF ++VK 
Sbjct: 121 LPPLQIPTGFSPFHQQMFFPPYDDQHHHHH-------HSSSSSSQFCNSLPPPFAVNVKG 180

Query: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240
                ++  VEKTK+WDMDLA LQ KA S       TKGKWIDGS+N     Q VEDY  
Sbjct: 181 D---SSSTAVEKTKIWDMDLA-LQGKASS------LTKGKWIDGSSN-----QHVEDY-- 240

Query: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300
                                   N TPYN+YNS               SQFGNN   NG
Sbjct: 241 ------------------------NFTPYNSYNS---------------SQFGNN---NG 300

Query: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360
           VFPSQ+     +   SSSS+S+LFFTPYASYITNPFESHIHFLSSNSHALSNPF+ S+LH
Sbjct: 301 VFPSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNSHALSNPFVPSALH 314

Query: 361 PFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 409
           PFA SQNLKPF   SFN KQL HAAD N      GA  S KDGAAG+S
Sbjct: 361 PFA-SQNLKPFSAASFNFKQLLHAADGN------GADRSNKDGAAGDS 314

[Close]

BLAST of CsaV3_1G002990 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 162.5 bits (410), Expect = 7.0e-40
Identity = 135/358 (37.71%), Postives = 182/358 (50.84%), Query Frame = 0


Query: 2   LRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQW-SGFRNPRIVRVSRS 61
           +R+   D++  +AK+E    ++   N N        +  SSSRQW S FRNPRIVRVSR+
Sbjct: 1   MRSGECDEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRT 60

Query: 62  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 121
           FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L L QPSKVIDWLL+  K D+D 
Sbjct: 61  FGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDK 120

Query: 122 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 181
           LPPLQ P GF+  +  ++F       +  +  S SS++S++        L    +     
Sbjct: 121 LPPLQFPHGFNQMYPNLIF------GNSGFGESPSSTTSTTFPGTNLGFLENWDLGGSSR 180

Query: 182 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 241
           T A  T  T  + + +D+D                  KGKWI    ND NS Q  + +N 
Sbjct: 181 TRARLTDTTTTQRESFDLD------------------KGKWI---KNDENSNQDHQGFNT 240

Query: 242 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNN----- 301
               Q  L                 + PYNN ++ ++  H QQ    SL Q GNN     
Sbjct: 241 NHQQQFPL-----------------TNPYNNTSAYYNLGHLQQ----SLDQSGNNVTVAI 300

Query: 302 -----NNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSH 349
                NN+N +            S+S+   S LFF P    +++ F ++  FL ++ H
Sbjct: 301 SNVAANNNNNL-------NLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSFLGASHH 303

[Close]

BLAST of CsaV3_1G002990 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 139.8 bits (351), Expect = 4.8e-33
Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 0


Query: 49  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 108
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 109 WLLDVTKLDIDNLPPLQIPPGF 131
           WLL+V K D+D LPPLQ PPGF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of CsaV3_1G002990 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-33
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 6   SKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPT---SSSRQWSGFRNPRIVRVSRSFG 65
           ++ ++  +  +E   VR++S     GK    K PT   SSS  W   ++PRIVRVSR+FG
Sbjct: 19  TRREREVKEDQEETEVRATS-----GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFG 78

Query: 66  GKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLP 125
           GKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LP
Sbjct: 79  GKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELP 138

Query: 126 PLQI-PPGFSPFHQQMLF 140
           PL I P  FS F+    F
Sbjct: 139 PLPISPENFSIFNHHQSF 151

[Close]

BLAST of CsaV3_1G002990 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-33
Identity = 77/138 (55.80%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 6   SKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPT---SSSRQWSGFRNPRIVRVSRSFG 65
           ++ ++  +  +E   VR++S     GK    K PT   SSS  W   ++PRIVRVSR+FG
Sbjct: 19  TRREREVKEDQEETEVRATS-----GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFG 78

Query: 66  GKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLP 125
           GKDRHSKVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID LP
Sbjct: 79  GKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELP 138

Query: 126 PLQI-PPGFSPFHQQMLF 140
           PL I P  FS F+    F
Sbjct: 139 PLPISPENFSIFNHHQSF 151

[Close]

BLAST of CsaV3_1G002990 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 93.2 bits (230), Expect = 5.2e-19
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 35  FPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDL 94
           F +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDL
Sbjct: 23  FSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDL 82

Query: 95  QDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSS 154
           QD+L   QPSK ++WL++     I +LP L      + F        ++D + +   S+ 
Sbjct: 83  QDRLGFDQPSKAVEWLINAASDSITDLPLLN-----TNF-------DHLDQNQNQTKSAC 137

Query: 155 SSSSSSSS 163
           SS +S SS
Sbjct: 143 SSGTSESS 137

The following BLAST results are available for this feature:

BLAST of CsaV3_1G002990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648477.1	4.0e-223	100.00	transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa...	[more]
KAA0057999.1	3.8e-205	93.93	transcription factor TCP5 [Cucumis melo var. makuwa]	[more]
XP_008453284.1	3.8e-205	93.93	PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: t...	[more]
XP_038879592.1	9.4e-164	81.49	transcription factor TCP5-like [Benincasa hispida]	[more]
KAG6589600.1	1.7e-112	64.71	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_1G002990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	9.8e-39	37.71	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	6.8e-32	80.49	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9S7W5	8.9e-32	55.80	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9C758	7.3e-18	46.09	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
Q93V43	1.7e-11	27.63	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of CsaV3_1G002990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRU6	1.9e-223	100.00	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A1S3BX07	1.8e-205	93.93	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
A0A5A7UWW8	1.8e-205	93.93	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1E797	9.0e-112	64.46	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JE53	1.2e-111	63.73	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]

BLAST of CsaV3_1G002990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	7.0e-40	37.71	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	4.8e-33	80.49	TCP domain protein 17	[more]
AT3G02150.1	6.3e-33	55.80	plastid transcription factor 1	[more]
AT3G02150.2	6.3e-33	55.80	plastid transcription factor 1	[more]
AT1G30210.1	5.2e-19	46.09	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 63..225 e-value: 1.2E-22 score: 81.1
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 63..121 score: 26.103212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..47
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 3..408
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 3..408

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G002990.1	CsaV3_1G002990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity