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CsaV3_1G002810 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCGTATCCACTTTTTCTATATGCTTAAGAATCAGATTCACCGAAGCAATTAAATCGAGGCTGAGTCGTCGAGGCTTTGAGAGTCAGTCAAGAGATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCGGTGAAGCCGTTTGTTGCTCCGGCAGTGAATCCGCAAGATCTCCCAGTCGATTATTCCGGTTTCATCGCCGTCGTTTTCGGTATCGCCGGTGTCATGTTCAGGGTACTTTTCTGTTTCTTTTCGAGTACTCATACGCTAATTATGGAGATCTTACTTTCTACTCATGCCACACTATTGGTTTTGGTTGAAATTGGACAGTACAAGCTTAGTTCGTGGCTGGCAATCATATTTTGTGCCCAATCGCTTGCGAATATGAGGAATATTGAAAACGATCTCAAGCAGATTTCCATGGCCATGATGTGAGTGTTGCTCCCTTCTCGATCTTTATTTCACTGCTACTTCATACGGATCAGTAGGTAGAATTAAGTTTTTTCGGAAATCTGAACAGTCTAAATTCCGTCTAGGTTGATTCGATTTGTTGATGCAAGAATTGATGTTTATTAGCTAGGGTTCGAACTAATTCTCAAGGGTTCATCCATGTTGGTTGGCAAATTTAGCTACCTACTTTATTAGGCATTATGATATTTTTTATAATCTCTACATGTTTAGAATCCGCTATCATTCAATCAATGTACAAGAGTCAAAATTCTGTTGGTAGAAAGAAAATCGTTTAAAATGAACTTTGAGAGTGATTTGAGACTTGAGAGTGATTTGCATTAAGTTATTTTGAGTTGTTGTCGAACACCTCAATTTTTTCTTTAAAATAATTTATTTTCAAATTTAAACACTTGAAAAGTTAATCTTCTTAGTGAATTATAGTGAAAACTCAGGGTATTGGATTGTGTTATGTTAACAGTGGTCATGTTTAAGAGACGAAGTCTTTGGTTAGTTGTTTAATACCCTATAAGTTTCTGGATACCAAAATTTGCAAGGTTAGTAATTGTCATGCTTTACTAGTTCATGAATCTCAAAGTTGTGACTTGTGATGAACACGCCATCATAAAAGAAGAGAGAGTATTCACAATCTTTTACACTAGCAATCAAGTTTTGTGATATTTCAGATTCAGTATTGATTGCGTCCGCAATACTTGAGATTTAGGAACCTTGAATCTTAGATATAGATTGGTATCTATCATTGTAGTTTTAGTTTAACATGAGTCGGCCTTAAACGCTGTATGCAAACCATGAACATTTCCTCCCTTGACATATGCCATTACCTTTTTATTTTTCCTTTGGATCAAATACATCTTTGGTCTATGTACTTTTCACTTTTTTTCATTTTGGTTTATGTATTTCTAAATTATTCATTTTGGTCCCTATACTTTTAATATTTTGGTCCTTGTACTTTCAAAATGTTCATTTTGATTCTTATACTACAACTTTGGAGCATTTTGGCCCTTGAACTTTGAACATTTTAGGTCCCTTTATTGTTCGCTTTTATATCATTTTTAAGGGATTAAATTTGTTGTCTTTTTGTAACTTCAAGGAACCAAAATGTACATTTTGAAAGTACATTAACCAAAGCCAGAAGTTTATGGATCGAAGTAGCATTTAAACATTTTCCTTTTTGTACTTGCTTCTTACCCGTTTTCCTTTATGTAAAAGTTTAGAGCATTGACTAGGTAACTTGTAAATTGTGATTAATTATCATAAAAATTTATTTTCTTCGGAATTGGACCCAATGGATTGAAATGAAATTTGGATCGAGAACTTGCAAAATAAGAAACTAGAGTAAAATATGGGAGAGTACTTTCTTTATCAAGTTAGTTATTGTTTGTTCTTCCGTTGATTCAAATCACTGCTCCTCCAACCTGAGTTGTGGCTTGGTAACAATGTCCCTTGAGGCCCAACTGACATGTGAAACTACATCTCTTAGTTTCTCCCTCCGATGATGGGTTAAGAAGTTCAAGGATAAACGAAAGATGGTGTTATGATTCCCTATAATGTTATCTAACAGTTTTGAGAACATAGGTGATTTTCAAAACAATTGGTGAAAATTTATCATATAAAGGTGTTAGATGCATTTTATTTTTGTAAAATTGGTCATCTTGGGGTTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTGTTAAGCCTCAAATCAAGTGAGGTCTAAGCAGATCATCACCATCTTGTTTGAATGATTTTTCTTTTTAACATTATCAACATTTTAACATGATTCGATAGCATCAACTTTATACCCATTTTGTGGTTTTAACTCTATTTTGGTCTTGAATCCAGGTTCGCTATTATGGGATTAGTGACAAATTATTTGAGTCCTGCACGACCGGGAGCCAAAAGTTAGACTCTTTATTTAGAATGATTATAATGTTTGTTTTCTTTGACTTAAATTATCTTAGGAGCTCTTTACAGTGACCGTTTTTATATTATGATCTCAAGTAATATTGTGGGCAGATCAAGATATGATGGAGGACAAATTTTAAGAGATTTACACTTCTTTTTTTAATTCCAAAGTTAGTAATTTGCACGTAACATCAACTATGTAATTATTTGCACTTACTGTCGAGTAGATACCATAGTTGTTTTTCGTATTCCTTTATATATATAGATAGATAGAACAGCACAGAACAAGTCTAATCACCACGAAAATCTACTGAGTGAAGCCAAGTGATGTCTATGATATATAGATTTTACTTTAGCGTTCATATTCACTTGAATCTCAAACAGATTCGAAAGTTGGACTTATTTGGATTGATTAGATCATTCTTTTTATATATATATATGTATAAACAAATTATTATTTGAGCTATTTTGATAAGAAGTTGTTTGAGGATATACTTTGATAGTTGCCGAACACTTTTTGTTTTTGTTTTTCAATGACTTATTTTCAAAACCTAACTCTCCAATCAAGTTAAATCAAGAGACTTGTGC ATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCGGTGAAGCCGTTTGTTGCTCCGGCAGTGAATCCGCAAGATCTCCCAGTCGATTATTCCGGTTTCATCGCCGTCGTTTTCGGTATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGCTGGCAATCATATTTTGTGCCCAATCGCTTGCGAATATGAGGAATATTGAAAACGATCTCAAGCAGATTTCCATGGCCATGATGTTCGCTATTATGGGATTAGTGACAAATTATTTGAGTCCTGCACGACCGGGAGCCAAAAGTTAG ATGTCGACACAAGCGAATGATCCACGGCAGCCGTCGGCGGTGAAGCCGTTTGTTGCTCCGGCAGTGAATCCGCAAGATCTCCCAGTCGATTATTCCGGTTTCATCGCCGTCGTTTTCGGTATCGCCGGTGTCATGTTCAGGTACAAGCTTAGTTCGTGGCTGGCAATCATATTTTGTGCCCAATCGCTTGCGAATATGAGGAATATTGAAAACGATCTCAAGCAGATTTCCATGGCCATGATGTTCGCTATTATGGGATTAGTGACAAATTATTTGAGTCCTGCACGACCGGGAGCCAAAAGTTAG MSTQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQSLANMRNIENDLKQISMAMMFAIMGLVTNYLSPARPGAKS* Homology
BLAST of CsaV3_1G002810 vs. NCBI nr
Match: XP_004138191.1 (protein Asterix [Cucumis sativus] >KGN63717.1 hypothetical protein Csa_014204 [Cucumis sativus]) HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. NCBI nr
Match: XP_008453260.1 (PREDICTED: protein Asterix [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 4.0e-47 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. NCBI nr
Match: XP_038880376.1 (protein Asterix [Benincasa hispida]) HSP 1 Score: 194.9 bits (494), Expect = 3.4e-46 Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. NCBI nr
Match: XP_022933634.1 (protein Asterix-like [Cucurbita moschata] >XP_023007397.1 protein Asterix-like [Cucurbita maxima] >XP_023529496.1 protein Asterix-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. NCBI nr
Match: KAG6587575.1 (Protein Asterix, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy Swiss-Prot
Match: Q9SD88 (Protein Asterix OS=Arabidopsis thaliana OX=3702 GN=At5g07960 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-38 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy Swiss-Prot
Match: Q09993 (Protein Asterix OS=Caenorhabditis elegans OX=6239 GN=K10B2.4 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.1e-05 Identity = 32/101 (31.68%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy TrEMBL
Match: A0A0A0LSF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013160 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy TrEMBL
Match: A0A1S3BWL0 (protein Asterix OS=Cucumis melo OX=3656 GN=LOC103494034 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47 Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy TrEMBL
Match: A0A6J1KYK4 (protein Asterix-like OS=Cucurbita maxima OX=3661 GN=LOC111499903 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy TrEMBL
Match: A0A6J1F0A5 (protein Asterix-like OS=Cucurbita moschata OX=3662 GN=LOC111440996 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. ExPASy TrEMBL
Match: A0A6J1E5Z1 (protein Asterix-like OS=Cucurbita moschata OX=3662 GN=LOC111429753 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45 Identity = 96/101 (95.05%), Postives = 97/101 (96.04%), Query Frame = 0
BLAST of CsaV3_1G002810 vs. TAIR 10
Match: AT5G07960.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). ) HSP 1 Score: 160.2 bits (404), Expect = 8.6e-40 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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