CsaV3_1G001650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G001650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NHL domain protein
Location	chr1: 1073205 .. 1073732 (+)
RNA-Seq Expression	CsaV3_1G001650
Synteny	CsaV3_1G001650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTGTTGTGACGCTGATAAATCCAATTCTTTGTTGCCGACTGCCCGGTGCGGTTGTTTTCGGCTATCGTGTTTTGGATCCCGTCGTGTAGCCACTGTTGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGACCAGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGGAGTGGTGGTTGTGGTGGTTGTGGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCCTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACGGGAGGAACTAAGAATGTTTCTGCCGTCGCGTAA

mRNA sequence

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTGTTGTGACGCTGATAAATCCAATTCTTTGTTGCCGACTGCCCGGTGCGGTTGTTTTCGGCTATCGTGTTTTGGATCCCGTCGTGTAGCCACTGTTGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGACCAGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGGAGTGGTGGTTGTGGTGGTTGTGGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCCTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACGGGAGGAACTAAGAATGTTTCTGCCGTCGCGTAA

Coding sequence (CDS)

ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTGTTGTGACGCTGATAAATCCAATTCTTTGTTGCCGACTGCCCGGTGCGGTTGTTTTCGGCTATCGTGTTTTGGATCCCGTCGTGTAGCCACTGTTGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGACCAGAGGGGTTAGGGTTCTTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGGAGTGGTGGTTGTGGTGGTTGTGGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTTCAATATGATCCCTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACGGGAGGAACTAAGAATGTTTCTGCCGTCGCGTAA

Protein sequence

MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA*

Homology

[Close]

BLAST of CsaV3_1G001650 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 2.3e-98
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120
           RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of CsaV3_1G001650 vs. NCBI nr
Match: KAA0057881.1 (putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 343.2 bits (879), Expect = 1.3e-90
Identity = 165/176 (93.75%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG G GGGGGSGVRAGKFQ
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG-GGGGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of CsaV3_1G001650 vs. NCBI nr
Match: XP_008453108.1 (PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 340.5 bits (872), Expect = 8.6e-90
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG   GGGGGSGVRAGKFQ
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG---GGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of CsaV3_1G001650 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 319.7 bits (818), Expect = 1.6e-83
Identity = 158/177 (89.27%), Postives = 163/177 (92.09%), Query Frame = 0


Query: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVH+EG
Sbjct: 1   MAFTDVEEESP-CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120
           RWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS         GGGG GVRAGKFQY
Sbjct: 61  RWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS---------GGGGGGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA 176
           DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT  K+VS+VA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTIIKDVSSVA 167

[Close]

BLAST of CsaV3_1G001650 vs. NCBI nr
Match: KAG7023141.1 (hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.0 bits (728), Expect = 4.3e-73
Identity = 140/177 (79.10%), Postives = 149/177 (84.18%), Query Frame = 0


Query: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MA+ D EE  P C+A  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVH+EG
Sbjct: 1   MAYPDAEEPPP-CEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120
           RWW RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+G     G GGGGG+  R GKF Y
Sbjct: 61  RWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG-----GGGGGGGATGRPGKFHY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA 176
           DPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  K++S VA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120
           RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 6.4e-91
Identity = 165/176 (93.75%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG G GGGGGSGVRAGKFQ
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG-GGGGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.2e-90
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG   GGGGGSGVRAGKFQ
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG---GGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.2e-90
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG   GGGGGSGVRAGKFQ
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG---GGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 176
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL
Match: A0A6J1JH52 (uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-72
Identity = 139/177 (78.53%), Postives = 148/177 (83.62%), Query Frame = 0


Query: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60
           MA+ D EE  P  +AD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EG
Sbjct: 1   MAYPDAEEPPP-YEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120
           RWW RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+G     G GGGG +  R GKFQY
Sbjct: 61  RWWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG-----GGGGGGAAAGRPGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KNVSAVA 176
           DPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  K++S VA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of CsaV3_1G001650 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 9.4e-26
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 16  DKSNSLLPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRWWTRGVRVLLKL 75
           D  +  L   R  CF + C  S + +T G S WW+RI    ++  + RWW RG R   ++
Sbjct: 15  DDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWWIRGWR---RM 74

Query: 76  REWSEIVAGPRWKTFIRRFNR-NRSGG--------CGGCGSGGGGGSGVRAGKFQYDPLS 135
           REWSE+VAGPRWKT+IRRF R N  GG         GGCG G         GKF+YD LS
Sbjct: 75  REWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQGKFRYDQLS 134

Query: 136 YAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT 166
           Y++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Sbjct: 135 YSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of CsaV3_1G001650 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-23
Identity = 64/134 (47.76%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 42  TVGPSWWERIRASQVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCG 101
           TV  SWW+RI  +  H E RWW   VR  LK+REWSEIVAGPRWKTFIRRFNR+   G  
Sbjct: 19  TVKSSWWQRIHRNN-HQEPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 78

Query: 102 GCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIP- 161
              S           KF+YDP+SY ++F++  +     DDD     G R+FS RYAS+P 
Sbjct: 79  WDDS----------DKFRYDPVSYTLSFEDEDKD----DDDEAGVGGVRSFSMRYASVPV 134

Query: 162 APLKTGGTKNVSAV 175
           A  K+    +V AV
Sbjct: 139 ASGKSPAVISVDAV 134

[Close]

BLAST of CsaV3_1G001650 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-23
Identity = 63/154 (40.91%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 16  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWTRGVRVLLKL 75
           D+ +  +   R  CF L C GS + +   G  WW+RIR   ++  + RWW  G    +K+
Sbjct: 598 DEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSG---WMKM 657

Query: 76  REWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGG--GGGSGVRAGKFQYDPLSYAMNFDE 135
           REWSEIVAGP+WKTFIRRF RN       C +GG  GG +      F+YD  SY++NFD+
Sbjct: 658 REWSEIVAGPKWKTFIRRFGRNH------CCNGGIDGGCNRPEHVSFRYDSWSYSLNFDD 717

Query: 136 GSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT 166
           G +Q G  +D+      YR++S R+A+   P+ T
Sbjct: 718 G-KQTGHFEDEFP----YRDYSMRFAAPSLPVST 737

[Close]

BLAST of CsaV3_1G001650 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22
Identity = 68/145 (46.90%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 26  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWTRGVRVLLKLREWSE 85
           RC CF  S   SR    VG S W RIR     N       E RWW   +R  LK+REWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 86  IVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGE 145
           IVAGPRWKTFIRRFNR+   G     S           KFQYDPLSY++NFD+       
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWDAS----------EKFQYDPLSYSLNFDD------- 138

Query: 146 LDDDIDDF---NGYRNFSARYASIP 161
            DD+ D++    G R+FS R+AS+P
Sbjct: 139 -DDEEDEYVGLGGLRSFSTRFASVP 141

[Close]

BLAST of CsaV3_1G001650 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 28/78 (35.90%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 55  QVHNEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVR 114
           Q    G W   G   L  L+E SE +AGP+WK FIR F+  R                 R
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRK-------------KMRR 110

Query: 115 AGKFQYDPLSYAMNFDEG 133
              F YD  +Y++NFD+G
Sbjct: 111 DVDFTYDLKNYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of CsaV3_1G001650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657987.1	2.3e-98	100.00	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
KAA0057881.1	1.3e-90	93.75	putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]	[more]
XP_008453108.1	8.6e-90	93.18	PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putat...	[more]
XP_038878924.1	1.6e-83	89.27	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
KAG7023141.1	4.3e-73	79.10	hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_1G001650 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G001650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUB2	1.1e-98	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A5A7UWM1	6.4e-91	93.75	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A5D3BK38	4.2e-90	93.18	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BVG0	4.2e-90	93.18	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]
A0A6J1JH52	1.0e-72	78.53	uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666...	[more]

BLAST of CsaV3_1G001650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01430.1	9.4e-26	42.86	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT3G48020.1	1.5e-23	47.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G14890.1	1.5e-23	40.91	NHL domain-containing protein	[more]
AT5G62865.1	1.7e-22	46.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	3.1e-05	35.90	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 172..175
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 4..168
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 4..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G001650.1	CsaV3_1G001650.1	mRNA