CsaV3_1G001630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 1065915 .. 1066705 (+)
RNA-Seq ExpressionCsaV3_1G001630
SyntenyCsaV3_1G001630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTCACTTTCCAAACCCGCCTTCCCCCTTATTCCTTCCTTCTCTCTGTAATGCCGCTTCTTCTCAAAGACTATCAAATTAGATTCAAGTTTGTGTTCTTCCATTCCCTTTATTAACTCTATTTATGAATACCCTTTTCCTCTTTCTCTTCTGGGTCTTAACTTGTTTTTTACGTTTTTGTTTTATCTTCAGGATAATCGCACCATTCCCAGATGATTCAAAACAGAGACGTTCTGCTTTCTGTTCTGATTTGATTTGATTCCTCTGTTCTCGTTTCAGGTATCGTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTATCTCTTTTGTTTATGAAGGCGTTTTTCTGTTCATTAGCTTGGTGAAAGGCTGTGAATTTCTTTTTTCTTTTTTCTTCCATCTCTGTTGTTATTTTCTAAGGAAACAAACTGATGGGTTGTTTTGGGTCGGTTGGGTTGGGTTGTGAATGAATGATCTGGAAATCCAAGATTAAGGATTTGTTTATTGTTTAAGATTAAAAGTGATGGAAAAAAAGTGAAATTGCAATTATTATACACTTTTGTTGAGTGAAGATTTCAGTAACTTAAAGATAAGGATAAGTGCATAACCATTTGACATTTGTCCTTATCTTGGGTTTGAATTTTAAATTCATCTTGTCGGTATGGTATAGATTTTTAAAAAGTTGATCGGATAACGACCAATTTGTTTTTAATTATTTTTTTATTTCTTTTCTCTAGATCTTCTTGCACTCCAATTGCGTCTTTTGAAGATTCAATTTTACTGTTAGTTT

mRNA sequence

ATGTATTTCACTTTCCAAACCCGCCTTCCCCCTTATTCCTTCCTTCTCTCTGTAATGCCGCTTCTTCTCAAAGACTATCAAATTAGATTCAAGATAATCGCACCATTCCCAGATGATTCAAAACAGAGACGTTCTGCTTTCTGTTCTGATTTGATTTGA

Coding sequence (CDS)

ATGTATTTCACTTTCCAAACCCGCCTTCCCCCTTATTCCTTCCTTCTCTCTGTAATGCCGCTTCTTCTCAAAGACTATCAAATTAGATTCAAGATAATCGCACCATTCCCAGATGATTCAAAACAGAGACGTTCTGCTTTCTGTTCTGATTTGATTTGA

Protein sequence

MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI*
Homology
[Close]
BLAST of CsaV3_1G001630 vs. NCBI nr
Match: KGN63594.1 (hypothetical protein Csa_014103 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI 53
          MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI
Sbjct: 1  MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI 52

[Close]
BLAST of CsaV3_1G001630 vs. ExPASy TrEMBL
Match: A0A0A0LRH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005550 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.0e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI 53
          MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI
Sbjct: 1  MYFTFQTRLPPYSFLLSVMPLLLKDYQIRFKIIAPFPDDSKQRRSAFCSDLI 52

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63594.11.7e-20100.00hypothetical protein Csa_014103 [Cucumis sativus][more]
BLAST of CsaV3_1G001630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRH78.0e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005550 PE=4 SV=1[more]
BLAST of CsaV3_1G001630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001630.1CsaV3_1G001630.1mRNA