CsaV3_1G001370 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001370
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 817423 .. 820479 (+)
RNA-Seq ExpressionCsaV3_1G001370
SyntenyCsaV3_1G001370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGCTTCTGCACCTCAAATTTCCATGGTTACATTTCATTCAGCTGATGGCTTGAATTGAATTCAAGCAGTCAGTAGCTTTCTAAAGGAAGAGGCAAGTGATCTTTAACTTCATCCACTTTCATAAAGTCAATTACACGAGTCTCTATTCACAAAAATAACCTGAAATTCATTCATACTCCACACCTGGAGCCACACCCTTTTTTCTTCAACTCTATCTACGATCTCATAGATCTGGTCTGTTTGGATTCTTTCCCTTTTCCCTTTTTGCTGTAGAGATTGGATTAGCTTCTTGCATTTTAGATTCCTACTTTATGGGTTTTCGATATTTTTAGGGGTTCTTCTAATTGGTAGTTTAAATTGTAGCTGACGGTAGAGTTTCTTTTCTTGGTGATTTGTTTTCTGTTAAAATTTTCAGTATGGAAGAACCCAATGAAGCTGGACATGAGAGTACTACAGATAAGTCAAATTATTGATATGGGTATCCAAGTTCATTCATTACTGAACACCAATGGTTTTACGTTCCTTCAGGTCAAGTTAGGATATGAAATCTAGTCGGAGAACATTTTATAACAACTTGGGAAAACAATGTAGATAACCATTGTCTTTTTTTCTAGAAGATGGAAATAAGCTTGTTTGTTGAAATGATACTAACACTCTAGAGATAATAAAGGAAACAAAACAGAAATAACCAACAAACAAAATCAAGTATGTTGCAGATACTTAGTAAGAGATTACAAGCTATCTATTTGAAGAAGAAAATAAAATGACTTCAATTTAAACTGATGTCTTGAATTGAATAGTCTATAAAAGTTTGAAAAGACGGCACGGAGAGAAGGTTTTAACTTGAGTAATCTCTTAAGAAACTTTTTTGCTCGCGGTAGTATCTCTATGGTTAGCATTTGATGGAGCTTTGTTTACATTTTCACTCGGATATACGAAATTGCATTTGTGGGGTTGATCGCAATAAAAATGGACGTTTACTGTTAGAATTTGACAGAAATGGAATGTTGATTACTATTATGTAATGTAACATGCTCATAAGGATGCATAATGCCTTCCCACTAGATTTTGGAGATGTAACTAGACATAAGGCATATGGGTAATGTGTGTAATGCTGATTAATGCCTACAGACGAATGTATATTCTATTTCTTAAACTTATATATATTCTTCTTATGGATGCTTCCAAGAAGGGGACGTGGCCCGAACTTCAATACTTAGTTGTGGCTTTAAATCTTCAAATTGGTAAAGCTCATCTCATTCTTCTACCATGGAAGGACCTTGAAGGCATAAATAGACTATGGTCGCCCTTGTAGTCCTAGTAAACTTGTGAAGGAATCTTTAAGATAGAATATATGTTGTTCATTCGTGAAGCTTCTATGTTATCATTTCTCATTGAATACTGCGAAAATCTCTACCATGTTATCCTTTAGAAAAACTAATGGATTCTTGTGAATGTCTATTTCTTTTCTTGCATTTTAAGGGATTCATTACAATTACAACATCCTCCAGCCTTTTATCATGGAGTCAGAGAATGAAGTTGAAGCCATGTATAGAGACTTCGAATTTTCTTGGGAAAGCTGATAGGTGTATGCTATTAAACCAAAAGATCCAATTAAGTGCCCTTTAGTTCTGATATGAATACAAGTTGCTGGTAAACTCATGAAATCAACTTGTGCATGCCTTTTGAACTAGATTTAGGCCACTGATCAGAGAGAATAGCTAATGTAGATACACTATAACAATTTTGAAATGTGGATAAAGATATGACGGTGTCGACTAATTTCATTCCATGTACACATATTCATTTTTTGGACAAAAAGTTGTGTATTGAATGAACACATCCTAAATTTTGCCTGTAAAGATATATATTGTAAAAAGGGTTGAGTGATTTAAAGAAAAATATTTTAAAACTGTTATTTTAGTTTGTAGCTACACTTGGTATGAAAATATTTTAAATATTTGTGAATGAATATTTATATATATATATATATGCTGACATATATAAAAGGTGGACATAAGTTTTTTTTTTTTTTTTAAAAAGAACTAATTTCTCAAATCCTTTATTTATTTATTCTTTTTCCCTCCATTCCCTCGTTTCTCTCACACGCCGCCCTTCTTTCTTCTCACGAACGTGAACGGCCCTTTTCCCTTCCGATTTTCTTCTCACCGGAATTTTCTTATCGCCGGACGCCCCCCCAACCGCCGGACTTCTTCTTGTCGATCGCTGCCACCAAATTTCTTCTTCGCGGAACGCCCCACAGGATTTCTTCTTGTCGAAAGCCGGTTTCACCCTAAACCCGTTCACTTCAACGAACGGGTCGACCACGTTCTGTCGCCCCAAGCTCCATTAGGTGCTCTTACTTGTTACCACTTAATCTTTGCTTACTGTTTTCTTTGGATTACTAAAGAGAAGGAAAACTCGTGCATCTCTTCTTTATCCTACTACCTGAGGATACCTTTTGCTATTACTATTAGTTTGAATCACAAGTTTGGCTAGGCAATTTTTTTAGATAGAAAACCAAGGAATAAAGTGTTAGTAGTAGGGTTTTACTGTCATTTACTTGCAACTTTCACAAATTCTATAAAATGTCCTTTTGAGTTTTGAATGTTTCATTTTGTGGGGATTAATTGGAGATCTCTTGGTAATAATAATAGGCTGTCAATAAGAGCATAGTGATAATTAACTAAAGTGTCAACATTGATCATTTTTAGAAATTTTATGTTTGGTTTAGAGTTTTTGTCTTTCGCCCTCAAACGTAGACTCTCTCGAATTCAGTCCAATGATGAATTTTGCAGGCCTCTATCTGGCGAAGCATCCTAAGATTCACAGGTGACCCACTGCCGTTTGTTGCTAATACCTTCATTCGAGTCATCAAGTAAGTAACATTTACCTTCTCTCTCTTTCTTCTTAGTCTTTTATCTCTGTTGATGCTAAAATCCCACTCCCATTATGAACAACCCAAAATTGTGACAACATTGTCAAAACCTTCTTCTGTGTTTGATTTCCAGCCAGTTTTGTGTGCTTCACCATATTCTTCCTGAAAAGTAG

mRNA sequence

ATGGGTGGCTTCTGCACCTCAAATTTCCATGTATGGAAGAACCCAATGAAGCTGGACATGAGAGTACTACAGATAAGTCAAATTATTGATATGGGATTTCTTCTTGTCGAAAGCCGGTTTCACCCTAAACCCGTTCACTTCAACGAACGGGTCGACCACGTTCTGTCGCCCCAAGCTCCATTAGATCTCTTGGCCTCTATCTGGCGAAGCATCCTAAGATTCACAGGTGACCCACTGCCGTTTGTTGCTAATACCTTCATTCGAGTCATCAACCAGTTTTGTGTGCTTCACCATATTCTTCCTGAAAAGTAG

Coding sequence (CDS)

ATGGGTGGCTTCTGCACCTCAAATTTCCATGTATGGAAGAACCCAATGAAGCTGGACATGAGAGTACTACAGATAAGTCAAATTATTGATATGGGATTTCTTCTTGTCGAAAGCCGGTTTCACCCTAAACCCGTTCACTTCAACGAACGGGTCGACCACGTTCTGTCGCCCCAAGCTCCATTAGATCTCTTGGCCTCTATCTGGCGAAGCATCCTAAGATTCACAGGTGACCCACTGCCGTTTGTTGCTAATACCTTCATTCGAGTCATCAACCAGTTTTGTGTGCTTCACCATATTCTTCCTGAAAAGTAG

Protein sequence

MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAPLDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK*
Homology
[Close]
BLAST of CsaV3_1G001370 vs. NCBI nr
Match: KGN63565.1 (hypothetical protein Csa_013332 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 1.5e-54
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP 60
           MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP
Sbjct: 1   MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP 60

Query: 61  LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK 104
           LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK
Sbjct: 61  LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK 103

[Close]
BLAST of CsaV3_1G001370 vs. ExPASy TrEMBL
Match: A0A0A0LNV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004320 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 7.5e-55
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP 60
           MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP
Sbjct: 1   MGGFCTSNFHVWKNPMKLDMRVLQISQIIDMGFLLVESRFHPKPVHFNERVDHVLSPQAP 60

Query: 61  LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK 104
           LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK
Sbjct: 61  LDLLASIWRSILRFTGDPLPFVANTFIRVINQFCVLHHILPEK 103

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001370 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63565.11.5e-54100.00hypothetical protein Csa_013332 [Cucumis sativus][more]
BLAST of CsaV3_1G001370 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNV97.5e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004320 PE=4 SV=1[more]
BLAST of CsaV3_1G001370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001370.1CsaV3_1G001370.1mRNA