CsaV3_1G001150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001150
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 645969 .. 646175 (+)
RNA-Seq ExpressionCsaV3_1G001150
SyntenyCsaV3_1G001150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

mRNA sequence

ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

Coding sequence (CDS)

ATGGGCCTGAATTTTGGATATCAGCCAATTCGAAGTTCGAACCTTAAGGCCCTGACCCATTCGTATTGGGCCTTGAAGCCCATAATCATTCAAACCGACCGAATAGTTTCATTTCAATTTGTTCTCATCTCTAAATATGAACCCTTCTTCTTCGTCTTCGCGCTGTGGATCTTGAATAACTCGAACCGGAATAGTCAGAAACTCTGA

Protein sequence

MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNNSNRNSQKL*
Homology
[Close]
BLAST of CsaV3_1G001150 vs. NCBI nr
Match: KGN63541.1 (hypothetical protein Csa_013254 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 3.0e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60
          MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN
Sbjct: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60

Query: 61 SNRNSQKL 69
          SNRNSQKL
Sbjct: 61 SNRNSQKL 68

[Close]
BLAST of CsaV3_1G001150 vs. ExPASy TrEMBL
Match: A0A0A0LU73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004070 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60
          MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN
Sbjct: 1  MGLNFGYQPIRSSNLKALTHSYWALKPIIIQTDRIVSFQFVLISKYEPFFFVFALWILNN 60

Query: 61 SNRNSQKL 69
          SNRNSQKL
Sbjct: 61 SNRNSQKL 68

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63541.13.0e-30100.00hypothetical protein Csa_013254 [Cucumis sativus][more]
BLAST of CsaV3_1G001150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU731.5e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004070 PE=4 SV=1[more]
BLAST of CsaV3_1G001150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001150.1CsaV3_1G001150.1mRNA