CsaV3_1G001130 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCAAATTCAGAAGAAATTCTTTGGTTTTTTCACCTCCTTTGTTTGACTTAACCAAAGACACAAAGAAAGAAAAAGAAAAGCAAATGTTGACATAACAATGTGTATGGCAGGCCCATGATAACAAGAGAGAATCTATCTATCCTCTCTTTTTTCCTCTCTTTTCCTTTGTGGTTATGGAAGCAAGAATGTCTTTTCCTTTGTATACTTCCAACCCACTAAAAACACATTCTTGTCATTTTCGTTCTCATATCAATTCTCATTGTTCTTTGTGACCAAAAGAGATAGAGAGATAGAGAGAGAGAGAGAGAAAGCTAAGAAATATGGAAGAAGAGTTTCAAGGGAGAGCAACAGAGTTACAACTGCAATGCTACAGTGCAAGGATTATGTCCCCAGAGATTGTCGAGATTGGAGACGAAAGTAAGACGATTATCAGTAGCAGAGACGGCGGTGCAACCGATGTTTACGTTGCCGTCGGTAAAGATGATATAGATGTGCTTAAATGGGCCCTTGATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTCTCCATGTTTTTCCTCCTCTCACCTACATCCCAACACCAGGTACATCAAGATTTCTGTTTTCCCTTTTCTTCCATCAAAAAATTCTTCCAAGTTGTTTTTCTCGCATAATCTGCCTGTTAAGAAATCAACGATTAGAGATAAACGTAAGTAACAGAGAATCGATAAATAGATTTACATGATTCATTAACTGTTGTAGCTATGTCCAAGGAATAGAGAGAATTTACATGGTGCACTCCTTTAAATTCTAAGGCCAAAATCATAAATAACATAAGTAGGATGTTTCAATACTACCGATAAAGGATGGTTGATGCAAATGGGCCATAGGGTAATGTATATATTTTGTTCCTATTTACTCTTTTGATGATTTGTGTTCCTTCTAAAAAGTCAAACTCAAGAATAATAGATTGTAAAGATAAATTATTCTTTATCTGACAGAAGAAAACTAAACTAGAAAATCTGCTGCCAGTGGTGATCCTCTCCCCATGTGATGGAACAAAAGATTAAGTTTGTGAAAGGAAAATTTTCTTCGAACACACAAGAAAAATATATGATCAAGAGAATGTTAGCATATTCATTGGGATGAAATTCATCTATGTTCATGAACTATTGTAAAAATTGCAGCATTTTTACCTGCAAATTCATTTTGATTTCAGTTGGAAGATTAGCAAGAAGCCAATTGAGCCAAGAACAGTTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTACTGCAAAAGTACATCCGCTTATGCACTGATGCCAAGGTGAGACACTAAACACGACACGAACATAATGACATGTCGTTTCTTTTAAAATTTAGGACACAGTCACGACAATGACACAATTTTTAAAATATCATTTTTATAACCGTTGAAAATTCAAAGTAGATGGTACGATGCATTTAATTTATATGGTTGAAAAAGTAGTTTGATGTATTTCACAACCAAATTTTTTTATTGTTGTTATATACGTCTTCTCTTTGTTAGTTTAATCAAGAAGATTCTACGTATGTCTAACACATGGGTTGCACCAACAAATATCGCAGTGTCCATGTGTCAACATGAATTCATTAGTCAACTAGATTGTTCGGAACTTTTAAAACACGTCGAAACCTTAGTCTTTGTGTTTGAAATTCTGATGTATCAGGTGACAGTGGACACATTGCTTCTAGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACTAATTTGGTCATAGGGACCAAAAAGCCACTTTCCTCAAAGTTTGGAGCTTTCATTTTTTCAATTCATCTTTTGGGGTTTCTTTTCTTCAAATACCCATCTGATTAATGCAATTTCTTGATAGGCTACTGGGAAAAAGAATGACCAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAATATTGTGAGGTTACTGTTGTTTATGAAGGGAAGAAAGTGAATGAGTGTCAACAGGAAATGGGGTTGCTTCCTTCTTCTAAAGACTCTGGTCTTCGACAGCAGCGGTCTGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGTAAATCGAGTTGCGATTAATGGGTTGTGTTCTGTTAAGGCAATGAAGAACACAACAAAGAAGAGGATCACCAATTTTACTTAATTTTTGGTTTTGTTTGTATAAATCAATTGACATTGTGATGAAGAAGGCTAAAAAGAAATCCCAAATGAGGTAGCTTTAAGTGAAAGATTCCTGTGTAATTTAATACTCCCATACCATTCCCCCCTTCTCCTTTTGAGAGAAATTCTTTAGTAAAAACGAATCTGTCTCTTTACAAACTAATGGCTTTTCATATAGGGAACAAACTTTCTTAACTAAAGAAGAAAAAACAAAGAAACAGCTAGCAGTGCAAAGTAACAAGGTCAATAAAACTTAACAATGGTTACACCACCAAGCCCCTGAGTAGTGGAAAAGGTTAGATCTCATATCTACTTCCGTGCCGCCTCAGCTATCTTTTCATCGAGATTGTTTTAAGATGACAAAGATTGAAGAAGAAGATCATGAAATGTAATTCCAAACTCAAAATGTACAGAGAAAGAACATGAAATTTATTTTATGAATGGTATCTCTTATACAAACTCATTCTAAACACAAGAAACTTTGATAGTTCAAAACAATGTATGGTTGTAATTCGCTGGGATTGAACAGAGATATTCTCCAACATCGAACACAAAGCGAAGGGATCAAAAACCAGCAAGATCAGCTGTGAATCGGAGACGATGAATGTGTCTATACATGAAGGAAGGCTCTTGAGCACTTACAAAATCAATTCATAAGCTTCAAATTTGTCTCTTTCGCATCAATATCAAAATCTTTCCATTTGTAGAAATAGTAAAATCTTCCATCTTCTAACCTTTCTTTGCAAAGATTCAATAGATGATGGATATAATTGTGGCAGTCTCCGTGAATAAAGACGACTTCATTTTATGCAATCAAATATCAACATTTCGAGTGTCGTCAACCATGCCACCGGCCAATCCTGATAAAAGCTCAACCGACTCCGCTGATGGCTGTTCTCCGATCAAAACTGCCACCACCTCTCTCATTGTAGGCCGGCGTTCAGGGTTCGGATGACAACAAGCTAAACCAAGCTTTAACATCAATTCAATCTCTTCAGTCTCATACTCTTCTCTGATTCTCGAGTCTGCCGCCGCAATCAACCGGCCGGCAGAGTAAAGATCTCTCACCCAATCAATAAGCACCATTTCTTCTTCCTCCGCTGCCAACTCAATCGGCCGTCGCCCACACACAACTTCAAGAACCACAACCCCAAAACTATAAACATCGCTAGCCGCTGTTGGAGTAGCCACCGTCGCAATCTCTGGCGCCAAATACCCCAAAGTCCCAACAATTCGAGTGGTGTTCGGAGTTTCGCCGTGTTGGTATAACTTCGCCAGCCCAAAATCGCCGACTCTGCCTCTCATTTCTGAATCTAACAACACGTTGCTCGATTTTATGTCTCTGTGAATCACCACCTGATCCCAACCATGATGGAGATAGTTCAAACCTTCCGCAACGTCGCCGAGTACACGGCGTCGCTGCTTCCAGCTGAGTAACGTTGTGGGCTTGTCAAATATCCACCGATTAAGACTTCCATTCGGCATATAATCATAAACCAACATTAATTCATTTTTTTTTCGACACCATCCTCGCATTTGAACTAGATTCTTATGTTGAAGCCTACCCATACTTGAGATTTCTGCCATGAATTCCTTTAACCCCTGTTTTGAATCGTGATTTACACATTTAACGGCGATTTCCGTGTGGTTTGGTAAAGTTCCTTTGAATACCCTTCCAAATCCGCCGGATCCCAACAGATTTTCTTCGGAAAATTTATCAGTAGCTTGTGAAAGCTCCTCGTTGGAGAATCTATGAGGCCAATATTCAAGTTCCCAATCCTCAATTTCTTCGTCTTCTTCTTTTGCTCTGTTCTTTCGCCAGTACCAAAAAAATCCAAACCCAGAAACTATGATCACAAACAGAACACAGCCAATTACAATACCGGCAACCGATCCTGGCGACAAAGGAGATGGTGGTGATTCTCTCATAAACACAGGGAAATTTGTGGTGTTAATGTCTCTAGCAACCCCAGTGTCACTAAAACTCCAAGCTAAAATCCTTTGCGCCTCAACCCATTTTGTCTTCGATGCTGAAAATCCCACAAACATTTCAGTCGATACATAATTTGCAATTAAAGGATCTCTAAAACTCAAAGTGGGTATCGAAGGACGAGGAATTCCAATTGGGGCGATTGTGACATTAATTTCGAAATTTGCTCCATCGAATTCGATCCAAGCGCGAAGGTTTTGCCCATTTCTCATCTGAATCGGAATAAATTGCCCATTGGAACCAAAATACCCAGCGCCGTGTATTTTACTCGACAACACACTGTTCAAATCGATTCCGATGTGACTATCATCTGGGTCGTTGAACTCCGTGTTTCGGCCAGTGTCGAATTCGACGGCGAGAAGTGGAGCAACGACGTGGGTTGTTGAATTAGTAAAGAGACCAAAGTATTGGCCGGCGATGACACCGGGAGGGGAAGTAGAATTGGAAAGAACGAAGGCCAAACCGAAGCCTGGACTAGTAGCGTCTTCCAGCAAGATCGAGAACACAAAAGAAGTTGAAAAGGAAGAAATCTTTGAGAAATTCGAAGTGGGTTTCATAGTTAGCTTCGTGTGATAGAAAACACGACCGATTGAATTCTGGTTTGAGTCGTTGTTGAGGCGGATTACAGGGGAATCGAACCTGGCGTCGCTAATGAGAATGAAATCAGTGCCATTCGATTCGTTTGAGAAGGAATTGAAGAAGAAATCGACTGCATAAGAAGAAAAGAAGAAGAGAAAGAAGATACAAAGCTGAAGTAGAAGTAGAAGTAAGGGAGGACGGCGTCGACGTCGTGGTTCCATATCTGCAACGGGTCGCCGGGGATGTGAAATCTCAGTAGAATTAGGGGCTGATGGGATCAGTAAAGAAAATGGAAGATTTGGAGGTGGAGAAAAGGTTGATCATATCATCATATAATGTGAAGAGATCTTTTAAGAAGACGCGGTTTGTTGATTTTCTCGGCGTTGAATTGTATCGCCGCCGCAAGAAGCTTTTATTATCTTCTTCTGTTTTCAAAGTCTTACTAAGTCCGATCAACTATTAATCCTTTATCCACAACTGAAATTGTAATTAATTTTTATTTAATAGTTTTTCTTACTAATAATTGACAAACTTTTCGTATTATATCTTAAAGAAATTCACACTATTTGAATTATTGGAATTTGCATGATTT ATGGAAGAAGAGTTTCAAGGGAGAGCAACAGAGTTACAACTGCAATGCTACAGTGCAAGGATTATGTCCCCAGAGATTGTCGAGATTGGAGACGAAAGTAAGACGATTATCAGTAGCAGAGACGGCGGTGCAACCGATGTTTACGTTGCCGTCGGTAAAGATGATATAGATGTGCTTAAATGGGCCCTTGATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTCTCCATGTTTTTCCTCCTCTCACCTACATCCCAACACCAGTTGGAAGATTAGCAAGAAGCCAATTGAGCCAAGAACAGTTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTACTGCAAAAGTACATCCGCTTATGCACTGATGCCAAGGTGACAGTGGACACATTGCTTCTAGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACTAATTTGGTCATAGGGACCAAAAAGCCACTTTCCTCAAAGCTACTGGGAAAAAGAATGACCAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAATATTGTGAGGTTACTGTTGTTTATGAAGGGAAGAAAGTGAATGAGTGTCAACAGGAAATGGGGTTGCTTCCTTCTTCTAAAGACTCTGGTCTTCGACAGCAGCGGTCTGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGTAAATCGAGTTGCGATTAA ATGGAAGAAGAGTTTCAAGGGAGAGCAACAGAGTTACAACTGCAATGCTACAGTGCAAGGATTATGTCCCCAGAGATTGTCGAGATTGGAGACGAAAGTAAGACGATTATCAGTAGCAGAGACGGCGGTGCAACCGATGTTTACGTTGCCGTCGGTAAAGATGATATAGATGTGCTTAAATGGGCCCTTGATCATGCTGTCTCACCTGGTTGTTGTGTCTTTCTTCTCCATGTTTTTCCTCCTCTCACCTACATCCCAACACCAGTTGGAAGATTAGCAAGAAGCCAATTGAGCCAAGAACAGTTGAGAGTGTATATCAATGAAGAAAACAACAGAAGGAGAAATCTACTGCAAAAGTACATCCGCTTATGCACTGATGCCAAGGTGACAGTGGACACATTGCTTCTAGAGAGCAACACAACAGCCAAAGCAATCCTTCAACTAATTCCAGTGCTCAATATCACTAATTTGGTCATAGGGACCAAAAAGCCACTTTCCTCAAAGCTACTGGGAAAAAGAATGACCAAAGGAGAGTTTGTGAAAAAGAATGCACCAGAATATTGTGAGGTTACTGTTGTTTATGAAGGGAAGAAAGTGAATGAGTGTCAACAGGAAATGGGGTTGCTTCCTTCTTCTAAAGACTCTGGTCTTCGACAGCAGCGGTCTGGGAAGAACTTGTTCGAGTGCGTTTGCTTGTCGAGTAAATCGAGTTGCGATTAA MEEEFQGRATELQLQCYSARIMSPEIVEIGDESKTIISSRDGGATDVYVAVGKDDIDVLKWALDHAVSPGCCVFLLHVFPPLTYIPTPVGRLARSQLSQEQLRVYINEENNRRRNLLQKYIRLCTDAKVTVDTLLLESNTTAKAILQLIPVLNITNLVIGTKKPLSSKLLGKRMTKGEFVKKNAPEYCEVTVVYEGKKVNECQQEMGLLPSSKDSGLRQQRSGKNLFECVCLSSKSSCD* Homology
BLAST of CsaV3_1G001130 vs. NCBI nr
Match: XP_004138091.1 (U-box domain-containing protein 52 [Cucumis sativus] >KGN63540.1 hypothetical protein Csa_013542 [Cucumis sativus]) HSP 1 Score: 470.3 bits (1209), Expect = 9.8e-129 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. NCBI nr
Match: KAA0057823.1 (U-box domain-containing protein 33-like [Cucumis melo var. makuwa]) HSP 1 Score: 458.0 bits (1177), Expect = 5.1e-125 Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. NCBI nr
Match: XP_008464515.1 (PREDICTED: U-box domain-containing protein 33-like [Cucumis melo] >TYJ98507.1 U-box domain-containing protein 33-like [Cucumis melo var. makuwa]) HSP 1 Score: 458.0 bits (1177), Expect = 5.1e-125 Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. NCBI nr
Match: XP_022965037.1 (U-box domain-containing protein 33-like [Cucurbita moschata]) HSP 1 Score: 421.0 bits (1081), Expect = 6.8e-114 Identity = 215/239 (89.96%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. NCBI nr
Match: XP_023516951.1 (U-box domain-containing protein 33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 214/239 (89.54%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy Swiss-Prot
Match: Q9FKG6 (U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-09 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy Swiss-Prot
Match: Q8GUH1 (U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08 Identity = 44/165 (26.67%), Postives = 76/165 (46.06%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy Swiss-Prot
Match: Q9SW11 (U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07 Identity = 45/167 (26.95%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy Swiss-Prot
Match: Q8GZ84 (U-box domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=PUB36 PE=2 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07 Identity = 54/222 (24.32%), Postives = 98/222 (44.14%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy Swiss-Prot
Match: Q683D5 (U-box domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=PUB37 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.9e-04 Identity = 45/183 (24.59%), Postives = 77/183 (42.08%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy TrEMBL
Match: A0A0A0LNU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004060 PE=4 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 4.8e-129 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy TrEMBL
Match: A0A5A7UPM8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001080 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.4e-125 Identity = 232/239 (97.07%), Postives = 235/239 (98.33%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy TrEMBL
Match: A0A5D3BHA8 (U-box domain-containing protein 33-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001100 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.4e-125 Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy TrEMBL
Match: A0A1S3CN70 (U-box domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103502375 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.4e-125 Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. ExPASy TrEMBL
Match: A0A6J1HJ95 (U-box domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111464982 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.3e-114 Identity = 215/239 (89.96%), Postives = 225/239 (94.14%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. TAIR 10
Match: AT5G47740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 128.3 bits (321), Expect = 8.5e-30 Identity = 77/202 (38.12%), Postives = 121/202 (59.90%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. TAIR 10
Match: AT5G47740.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 123.2 bits (308), Expect = 2.7e-28 Identity = 77/204 (37.75%), Postives = 121/204 (59.31%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. TAIR 10
Match: AT5G65500.1 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 66.2 bits (160), Expect = 4.0e-11 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. TAIR 10
Match: AT5G61550.1 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of CsaV3_1G001130 vs. TAIR 10
Match: AT5G61550.2 (U-box domain-containing protein kinase family protein ) HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10 Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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