CsaV3_1G001090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001090
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr1: 620843 .. 622741 (-)
RNA-Seq ExpressionCsaV3_1G001090
SyntenyCsaV3_1G001090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

mRNA sequence

ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

Coding sequence (CDS)

ATGACGAGGAGAAACGCAATTTTCACTTCCCTCAGATTGGCAAATTCCTTCTTTTCGACTCGGTCTCGATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTATGTTTCTCATCAGTCCCTCGTCTCCCATTTCACAATCAACCATCCTGTTCTGTTTTTCTCGTCGAACCCCCAATCGCTTCTCCAGCTTGTTTCGACCAACGATTGGTCGGAAATGTTAGAAACTGAATTAGAGACTTTAAACCCTACGCTCACACACGAAACTGTTGTCTATGTTTTGAAAAGACTTGACAAACAACCCCAAAAGGCCTCTGAGTTCTTCAACTGGGCTTCTGGGAAGAATGGGTCTACTCAAAGTTCTTCCATTTATAGCATGTTGCTTAGGATTTTTGTTCAGAATGAGTCCATGAAATTGTTCTGGATTACGTTAAGGTTAATGAAAGAACGAGGGTTTTACCTAGATGAGGAAACTTATAAGACCATTTTAGGGGTTTTGAGAAAGTCGAAGAAGGCTGCAGATGCCACGGGTTTGACTCATTTTTACAATCGAATGCTTCAACAAAATGCCATGGACAGTGTGGTGCAGAAGGTGGTTGATATTGTTTTAGGATCTGATTGGAGTAATGATGTTCCTGGAAAACTTGAGGAGCTTGGTATTGCGTTATCAGATAACTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCACTGAAAGCCTTGAGTTTTTTTCATTGGGTTGGTTGTAGGCCGGATTATGATCATAACACAGTTTCATACAATGCAATTGCTAGGGTTCTTGGACGGGATGACTCCATCGAGGCTTTTTGGGGCGTGATTGAAGAAATGAAGCATGCTAATCATGAAATTGACATCGACACTTACATAAAGATCTCCAGGCAGTTTCAGAAGAGCAAGATGATGGGTGAGGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCGTTGCAGGATTGCAGCGTTCTTTTGCGGACCATCGCTGCTAGTGACAATCCAGATTTGAGCTTGGTTTACAGAGTGGCCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATGTACGACGGAATCCATAGGTCATTGACAAGCACAGGAAAGTTTGATGATGCGGAGAATATCGTGAAGTCCATGAGAAATGCAGGATATGAACCTGATAATGTTACATACAGTCAGCTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCCGTAAAGTGCTGGATGAGATGGAAGCACAAGGATGTATTCCTGATATCAAGACTTGGACTATTTTAATTCAAGGACATTGTAATGCCAATGAACTTGACATTGCTTTAGTTTGTTTTGCAAAGATGATAGAGAAGAACTGTGATCCAGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTAACCAGAAAAAGTTAAATGGTGCATATCAGTTGCTGATTGAGTTGACAAATAAGGCTCATGTAAGACCATGGCAGGCAACATATAAACAGTTAATTAAAAATCTTTTGGAAGTTAGGAAACTTGAGGAAGCCATTGCCCTCCTTCGTTTAATGAAGAAACAAAATTACCCACCTTTTCCAGAACCCTTTGTTCAATATATCTCCAAGTTTGGTACTGTGCAGGATGCTGATGATTTTCTGAAGGTTCTTAGTTCAAAAGAATATCCTTCCGTGTCTGCTTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTCAAATGCCCACATCACATTCGAAAGCATAACGAAGTTTGTAAGCTCTTTGGATCTGCAGAAAGCAATACCACTGCTGCTACTCAATCTTCCTCCAATCCGATTGAAACTTAA

Protein sequence

MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAATQSSSNPIET*
Homology
BLAST of CsaV3_1G001090 vs. NCBI nr
Match: XP_004138087.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_013352 [Cucumis sativus])

HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 633
           HIRKHNEVCKLFGSAESNTTAATQSSSNPIET
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

BLAST of CsaV3_1G001090 vs. NCBI nr
Match: KAA0057819.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1167.5 bits (3019), Expect = 0.0e+00
Identity = 581/623 (93.26%), Postives = 608/623 (97.59%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+ HF INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPHFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EAR
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CsaV3_1G001090 vs. NCBI nr
Match: XP_008464511.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis melo] >TYJ98503.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 580/623 (93.10%), Postives = 607/623 (97.43%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+  F INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EAR
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CsaV3_1G001090 vs. NCBI nr
Match: XP_038880639.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa hispida])

HSP 1 Score: 1096.6 bits (2835), Expect = 0.0e+00
Identity = 547/632 (86.55%), Postives = 586/632 (92.72%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS +SHQSL+  F  NH VLFFSS P S
Sbjct: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSISHQSLIPCFRCNHRVLFFSSKPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LV  NDWSEMLE+ELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNW  GKNG TQS
Sbjct: 61  LLELVLANDWSEMLESELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWVCGKNGFTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIF QNESMK FWITLR+MKE+GFYLDEETY TI GVL+ +KKAADAT LTH
Sbjct: 121 SSIYSILLRIFAQNESMKQFWITLRVMKEQGFYLDEETYLTIFGVLKSAKKAADATALTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNR+L +N MDSVV+K+V+IVLGSDWS+D+  KLEELGIALSDNFVIRVLKELRNSP K
Sbjct: 181 FYNRLLLENGMDSVVRKIVNIVLGSDWSSDIATKLEELGIALSDNFVIRVLKELRNSPSK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFFHWVG RPDY+HNTV+YNAIARVLGRD+SIE FWGVIEEMK+A+HEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGSRPDYNHNTVTYNAIARVLGRDESIEEFWGVIEEMKNASHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSLQ+CS+LLRTIAA DNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLQECSILLRTIAAGDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFD+AENI+ SMRNAGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAIYDGIHRSLTSAGKFDEAENIINSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWTILIQG+CNANELD ALVCFAKMIEKNC+PDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTILIQGYCNANELDSALVCFAKMIEKNCNPDADLLDVLISGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L QKKL+GAYQLL EL NKAHVRPWQATYKQLI+ LLEVRKLEEAIALL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLTELVNKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTV+DA DFLKVLS KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 SEPFVQYISKFGTVEDAVDFLKVLSLKEYPSMSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 633
           HIRKH+E+CKLFGSAES  T  TQSS NPI T
Sbjct: 601 HIRKHSEICKLFGSAESKITPTTQSSPNPIGT 632

BLAST of CsaV3_1G001090 vs. NCBI nr
Match: XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 542/638 (84.95%), Postives = 585/638 (91.69%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           M RR AI TSL LANS FSTRS + QVTRF PSS +SHQS    FT NH ++FFSS P S
Sbjct: 1   MARRKAILTSLTLANSLFSTRSSHSQVTRFLPSS-LSHQSRFPPFTTNHRIMFFSSKPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LV  NDWSE+LETELETLNPTLTHET+VYVLKRLDK+PQKAS+FFNWA GKNGSTQS
Sbjct: 61  LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S IYS+LLRIFVQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVL S+W+NDV  KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
            LSFFHWVGCRPDYDHNTV+YNAIARVLGRDDSIEAFWG++EEMK+A HEIDIDTYIKIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQ+SKMMG+AVKLYELMMDGPYKPSLQDCSVLLR+I+ASDNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFD+AENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHC ANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L QKKL+GAYQLLIEL NKAH+RPWQATYK LI+ LLEVRKLEEAI+LLRLMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAES------NTTAATQSSSNPIET 633
           HIRKH+E+CKLFGSAES       TT  TQSS NPI T
Sbjct: 601 HIRKHSEICKLFGSAESKSTTPTTTTTTTQSSPNPIGT 637

BLAST of CsaV3_1G001090 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 2.0e-203
Identity = 362/622 (58.20%), Postives = 461/622 (74.12%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLF----FSS 60
           M R  AI +SLR A S  STRS Y   ++   SS +S   L S   +    L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRS-YLSRSKVGFSSNLS-SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  NPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNG 120
            P S+LQLV  NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F +W    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADAT 180
            + S+ +YS++LRI VQ  SMK FW+TLR MK+ GFYLDE+TYKTI G L K K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 GLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN 240
            + HFY RML++NAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 SPLKALSFFHWV---GCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDI 300
            PLKAL+FFHWV   G    Y H+TV+YNA  RVL R +S+  FW V++EMK A +++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVA 360
           DTYIK+SRQFQKS+MM E VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LV+RV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKA 420
           +K+E+TG SLSKA+YDGIHRSLTS G+FD+AE I K+MRNAGYEPDN+TYSQLVFGLCKA
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 420

Query: 421 RRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLL 480
           +RLEEAR VLD+MEAQGC PDIKTWTILIQGHC  NELD AL CFA M+EK  D D++LL
Sbjct: 421 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 480

Query: 481 DVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMK 540
           DVLI GF+   K  GA   L+E+   A+V+PWQ+TYK LI  LL+++K EEA+ LL++MK
Sbjct: 481 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 540

Query: 541 KQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKD 600
           KQNYP + E F  Y++KFGT++DA  FL VLSSK+ PS +AY H+  +F+ EGR ++AK+
Sbjct: 541 KQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKN 600

Query: 601 LLFKCPHHIRKHNEVCKLFGSA 616
           LLF CPHH + H ++ +LFG+A
Sbjct: 601 LLFICPHHFKTHPKISELFGAA 620

BLAST of CsaV3_1G001090 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.1e-84
Identity = 179/562 (31.85%), Postives = 301/562 (53.56%), Query Frame = 0

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           ++ + S  +  + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         S
Sbjct: 84  VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S  Y+ +LRIF  N  +  FW  +  MK++G  +       +    +K     D   L  
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
            +      N++D V  +V  IV+   W  DV  +L +L +    + V  VL++L   P K
Sbjct: 204 LFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           AL FF W+     + H+  +YNA+ARVLG++  ++ F  +IEE++ A +E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYK--PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEA 360
            +F ++KM+ EAV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +  
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383

Query: 361 TGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEE 420
            G  +   M   + +SL S  +F  +  ++K+M   GY P     S +  GL +  + +E
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443

Query: 421 ARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDAD-LLDVLI 480
           A ++++ MEA G   D K    L++GHC+A +L+ A  CF KMI K     A    + L+
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503

Query: 481 SGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEAIALLRLM 540
             + N  +    Y+L  EL  +  ++PW +TYK +++NLL  +       EEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563

Query: 541 KKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAK 600
           +   +PPF +PF+ Y+S  GT  +A  FLK ++SK++PS S  L +F +     R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623

Query: 601 DLLFKCPHHIRKHNEVCKLFGS 615
           DLL   P +IR++ EV +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645

BLAST of CsaV3_1G001090 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 5.9e-83
Identity = 173/576 (30.03%), Postives = 306/576 (53.12%), Query Frame = 0

Query: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 114
           SS   +++ + S     + +  ELE+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 174
           +    SS  Y+M+LRI   N  +  FW  + +MK++G  L       +    +K    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 234
              L   +      N+ ++V  +V  IV+  +W +DV  ++ +L +    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 294
              P KAL FF W+     + H+  +YNA+ARVLG++  ++ F  ++ EM+ A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYIKISRQFQKSKMMGEAVKLYELMMDG---PYKPSLQDCSVLLRTIAASDNPDLSLVYR 354
           TY+++S +F ++K++ EAV L+E+ M G      P+     +LL+ I  +   D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLC 414
             K +   G +L+ ++   + +SL S  + + +  ++K M+  GY P     S +   L 
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 KARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDAD 474
           +  + +EA + +D ME+ G   D K    L++G+C++  LD ALVCF KM+       AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 L-LDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEA 534
              + L+  + N+ ++  AY+LL     K  ++P  +TYK L+ NLL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK ++S  +P +S  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTA 622
            R+SEA+DLL  CP++IR + +V +LF + + N +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659

BLAST of CsaV3_1G001090 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.0e-30
Identity = 96/402 (23.88%), Postives = 192/402 (47.76%), Query Frame = 0

Query: 195 VQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDY 254
           V KV+D +   D   ++   L+E+ + LS + ++ VL+  R++   A  FF W   R  +
Sbjct: 134 VCKVIDELFALD--RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVK 314
            H++ +YN++  +L +    E    V+EEM      + ++T+    + F  +K   +AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHR 374
           ++ELM    +K  ++  + LL ++  A    +  +++   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 375 SLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIP 434
                    +A  I   M + G +PD V ++ ++ GL ++R+  +A K+   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 435 DIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLL 494
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKL+  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 495 IELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGT 554
            E+  K H  P   TY  LIK +   +  E A  +   M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 555 VQDAD----DFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEA 592
            ++ +     + +++     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

BLAST of CsaV3_1G001090 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.6e-30
Identity = 99/385 (25.71%), Postives = 181/385 (47.01%), Query Frame = 0

Query: 215 LEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSI 274
           L E GI L    +IRVL    ++      FF W   +P Y H+     ++  +L +    
Sbjct: 88  LNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQF 147

Query: 275 EAFWGVIEEMKHANHE-IDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSV 334
            A WG+IEEM+  N E I+ + ++ + R+F  + M+ +AV++ + M     +P       
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207

Query: 335 LLRTIAASDN-PDLSLVYR-VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSM 394
           LL  +  + +  + S V+  + +KF       +  +Y          GK  +A+ ++  M
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCRE-----GKLMEAKEVLVQM 267

Query: 395 RNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANE- 454
           + AG EPD V ++ L+ G   A ++ +A  ++++M  +G  P++  +T+LIQ  C   + 
Sbjct: 268 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 327

Query: 455 LDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYK 514
           +D A+  F +M    C+ D      LISGF     ++  Y +L ++  K  V P Q TY 
Sbjct: 328 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG-VMPSQVTYM 387

Query: 515 QLIKNLLEVRKLEEAIALLRLMKKQNYPP---FPEPFVQYISKFGTVQDADDFLKVLSSK 574
           Q++    +  + EE + L+  MK++   P        ++   K G V++A      + + 
Sbjct: 388 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 447

Query: 575 EY-PSVSAYLHIFNSFFNEGRYSEA 592
              P V  ++ + N F ++G   EA
Sbjct: 448 GLSPGVDTFVIMINGFTSQGFLIEA 466

BLAST of CsaV3_1G001090 vs. ExPASy TrEMBL
Match: A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)

HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 633
           HIRKHNEVCKLFGSAESNTTAATQSSSNPIET
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

BLAST of CsaV3_1G001090 vs. ExPASy TrEMBL
Match: A0A5A7UW70 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001030 PE=4 SV=1)

HSP 1 Score: 1167.5 bits (3019), Expect = 0.0e+00
Identity = 581/623 (93.26%), Postives = 608/623 (97.59%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+ HF INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPHFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EAR
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CsaV3_1G001090 vs. ExPASy TrEMBL
Match: A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)

HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 580/623 (93.10%), Postives = 607/623 (97.43%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+  F INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EAR
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CsaV3_1G001090 vs. ExPASy TrEMBL
Match: A0A1S3CLM3 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502372 PE=4 SV=1)

HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 580/623 (93.10%), Postives = 607/623 (97.43%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSL+  F INHPVLFFSSNP S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWASGKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           SSIYS+LLRIFVQNESMKLFWITLRLMKERGFYLDEETY TILGVLRK+KKAADAT L H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV IVLGSDWSNDV GKLEELGIALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           ALSFF+WVGCRPDYDHNTVSYNAIARVL R+DSI+AFWGVIEEMK+A+ +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQKSKMMG+AVKLYELMMDGPYKPSL DCS+LLRTIAASDNPDLSLVYRVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFDDAE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EAR
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHCNAN+LD+ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L+QKKL+GAYQLLIELTNKAHVRPWQATYK LIKNLLEVRKLEEA+ALLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAESNTTAAT 624
           HIRKHNEVCKLFGSAES TT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CsaV3_1G001090 vs. ExPASy TrEMBL
Match: A0A6J1F5I7 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441023 PE=3 SV=1)

HSP 1 Score: 1077.4 bits (2785), Expect = 0.0e+00
Identity = 540/635 (85.04%), Postives = 583/635 (91.81%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
           M RR AI TSL LANS +STRS Y QVTRF PSS +SHQS    FT NH +LFFSS P S
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSS-LSHQSRFPPFTTNHRILFFSSKPHS 60

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           LL+LV  NDWSE LETELETLNPTLTHET+VYVLKRLDK+PQKAS+FF+WA GKNGSTQS
Sbjct: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S IYS+LLRI VQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVL S+W+NDV  KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
            LSFFHWVGCRPDYDHNTV+YNAIARVLGRDDSIEAFWG++EEMK+A HEIDIDTYIKIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
           RQFQ+SKMMG+AVKLYELMMDGPYKPSLQDCSVLLR+I+ASDNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
           YSLSKA+YDGIHRSLTS GKFD+AENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHC ANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
           L QKKL+GAYQLLIEL NKAH+RPWQATYK LI+ LLEVRKLEEAI+LLRLMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHNEVCKLFGSAES---NTTAATQSSSNPIET 633
           HIRKH+E+CKLFGSAES    TT  TQSS NPI T
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634

BLAST of CsaV3_1G001090 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 710.3 bits (1832), Expect = 1.4e-204
Identity = 362/622 (58.20%), Postives = 461/622 (74.12%), Query Frame = 0

Query: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLF----FSS 60
           M R  AI +SLR A S  STRS Y   ++   SS +S   L S   +    L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRS-YLSRSKVGFSSNLS-SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  NPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNG 120
            P S+LQLV  NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F +W    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADAT 180
            + S+ +YS++LRI VQ  SMK FW+TLR MK+ GFYLDE+TYKTI G L K K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 GLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN 240
            + HFY RML++NAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 SPLKALSFFHWV---GCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDI 300
            PLKAL+FFHWV   G    Y H+TV+YNA  RVL R +S+  FW V++EMK A +++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVA 360
           DTYIK+SRQFQKS+MM E VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LV+RV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKA 420
           +K+E+TG SLSKA+YDGIHRSLTS G+FD+AE I K+MRNAGYEPDN+TYSQLVFGLCKA
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 420

Query: 421 RRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLL 480
           +RLEEAR VLD+MEAQGC PDIKTWTILIQGHC  NELD AL CFA M+EK  D D++LL
Sbjct: 421 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 480

Query: 481 DVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMK 540
           DVLI GF+   K  GA   L+E+   A+V+PWQ+TYK LI  LL+++K EEA+ LL++MK
Sbjct: 481 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 540

Query: 541 KQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKD 600
           KQNYP + E F  Y++KFGT++DA  FL VLSSK+ PS +AY H+  +F+ EGR ++AK+
Sbjct: 541 KQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKN 600

Query: 601 LLFKCPHHIRKHNEVCKLFGSA 616
           LLF CPHH + H ++ +LFG+A
Sbjct: 601 LLFICPHHFKTHPKISELFGAA 620

BLAST of CsaV3_1G001090 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 314.3 bits (804), Expect = 2.2e-85
Identity = 179/562 (31.85%), Postives = 301/562 (53.56%), Query Frame = 0

Query: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
           ++ + S  +  + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         S
Sbjct: 84  VIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLS 143

Query: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
           S  Y+ +LRIF  N  +  FW  +  MK++G  +       +    +K     D   L  
Sbjct: 144 SKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKE 203

Query: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
            +      N++D V  +V  IV+   W  DV  +L +L +    + V  VL++L   P K
Sbjct: 204 LFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRK 263

Query: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
           AL FF W+     + H+  +YNA+ARVLG++  ++ F  +IEE++ A +E++++TY+++S
Sbjct: 264 ALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVS 323

Query: 301 RQFQKSKMMGEAVKLYELMMDGPYK--PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEA 360
            +F ++KM+ EAV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +  
Sbjct: 324 ARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTG 383

Query: 361 TGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEE 420
            G  +   M   + +SL S  +F  +  ++K+M   GY P     S +  GL +  + +E
Sbjct: 384 NGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDE 443

Query: 421 ARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDAD-LLDVLI 480
           A ++++ MEA G   D K    L++GHC+A +L+ A  CF KMI K     A    + L+
Sbjct: 444 ANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLV 503

Query: 481 SGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEAIALLRLM 540
             + N  +    Y+L  EL  +  ++PW +TYK +++NLL  +       EEA++LL +M
Sbjct: 504 LAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMM 563

Query: 541 KKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAK 600
           +   +PPF +PF+ Y+S  GT  +A  FLK ++SK++PS S  L +F +     R+SEA+
Sbjct: 564 RNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQ 623

Query: 601 DLLFKCPHHIRKHNEVCKLFGS 615
           DLL   P +IR++ EV +LF +
Sbjct: 624 DLLSMSPSYIRRNAEVLELFNT 645

BLAST of CsaV3_1G001090 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 310.1 bits (793), Expect = 4.2e-84
Identity = 173/576 (30.03%), Postives = 306/576 (53.12%), Query Frame = 0

Query: 55  SSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGK 114
           SS   +++ + S     + +  ELE+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAAD 174
           +    SS  Y+M+LRI   N  +  FW  + +MK++G  L       +    +K    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKEL 234
              L   +      N+ ++V  +V  IV+  +W +DV  ++ +L +    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDID 294
              P KAL FF W+     + H+  +YNA+ARVLG++  ++ F  ++ EM+ A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYIKISRQFQKSKMMGEAVKLYELMMDG---PYKPSLQDCSVLLRTIAASDNPDLSLVYR 354
           TY+++S +F ++K++ EAV L+E+ M G      P+     +LL+ I  +   D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLC 414
             K +   G +L+ ++   + +SL S  + + +  ++K M+  GY P     S +   L 
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 KARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDAD 474
           +  + +EA + +D ME+ G   D K    L++G+C++  LD ALVCF KM+       AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 L-LDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVR-----KLEEA 534
              + L+  + N+ ++  AY+LL     K  ++P  +TYK L+ NLL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLRLMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK ++S  +P +S  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTA 622
            R+SEA+DLL  CP++IR + +V +LF + + N +A
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESA 659

BLAST of CsaV3_1G001090 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-31
Identity = 96/402 (23.88%), Postives = 192/402 (47.76%), Query Frame = 0

Query: 195 VQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDY 254
           V KV+D +   D   ++   L+E+ + LS + ++ VL+  R++   A  FF W   R  +
Sbjct: 134 VCKVIDELFALD--RNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVK 314
            H++ +YN++  +L +    E    V+EEM      + ++T+    + F  +K   +AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHR 374
           ++ELM    +K  ++  + LL ++  A    +  +++   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 375 SLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIP 434
                    +A  I   M + G +PD V ++ ++ GL ++R+  +A K+   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 435 DIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLL 494
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKL+  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 495 IELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFGT 554
            E+  K H  P   TY  LIK +   +  E A  +   M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 555 VQDAD----DFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEA 592
            ++ +     + +++     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

BLAST of CsaV3_1G001090 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-31
Identity = 99/385 (25.71%), Postives = 181/385 (47.01%), Query Frame = 0

Query: 215 LEELGIALSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSI 274
           L E GI L    +IRVL    ++      FF W   +P Y H+     ++  +L +    
Sbjct: 88  LNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQF 147

Query: 275 EAFWGVIEEMKHANHE-IDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSV 334
            A WG+IEEM+  N E I+ + ++ + R+F  + M+ +AV++ + M     +P       
Sbjct: 148 GAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGC 207

Query: 335 LLRTIAASDN-PDLSLVYR-VAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSM 394
           LL  +  + +  + S V+  + +KF       +  +Y          GK  +A+ ++  M
Sbjct: 208 LLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCRE-----GKLMEAKEVLVQM 267

Query: 395 RNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANE- 454
           + AG EPD V ++ L+ G   A ++ +A  ++++M  +G  P++  +T+LIQ  C   + 
Sbjct: 268 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 327

Query: 455 LDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYK 514
           +D A+  F +M    C+ D      LISGF     ++  Y +L ++  K  V P Q TY 
Sbjct: 328 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG-VMPSQVTYM 387

Query: 515 QLIKNLLEVRKLEEAIALLRLMKKQNYPP---FPEPFVQYISKFGTVQDADDFLKVLSSK 574
           Q++    +  + EE + L+  MK++   P        ++   K G V++A      + + 
Sbjct: 388 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 447

Query: 575 EY-PSVSAYLHIFNSFFNEGRYSEA 592
              P V  ++ + N F ++G   EA
Sbjct: 448 GLSPGVDTFVIMINGFTSQGFLIEA 466

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004138087.10.0e+00100.00pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sa... [more]
KAA0057819.10.0e+0093.26pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008464511.10.0e+0093.10PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic ... [more]
XP_038880639.10.0e+0086.55pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa ... [more]
XP_023530746.10.0e+0084.95pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q9STK52.0e-20358.20Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9M8913.1e-8431.85Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF15.9e-8330.03Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9LZP32.0e-3023.88Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
P0C8A02.6e-3025.71Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A0A0LNT70.0e+00100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1[more]
A0A5A7UW700.0e+0093.26Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BGX00.0e+0093.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CLM30.0e+0093.10pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucumis ... [more]
A0A6J1F5I70.0e+0085.04pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT3G48250.11.4e-20458.20Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02490.12.2e-8531.85Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.14.2e-8430.03Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62470.11.4e-3123.88Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G49730.11.8e-3125.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 59..202
e-value: 2.2E-9
score: 38.9
coord: 221..347
e-value: 6.8E-14
score: 53.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 499..627
e-value: 1.6E-5
score: 26.6
coord: 371..498
e-value: 3.0E-32
score: 114.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 508..539
e-value: 0.001
score: 17.1
coord: 437..470
e-value: 9.4E-7
score: 26.6
coord: 401..435
e-value: 9.3E-10
score: 36.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 433..470
e-value: 2.4E-7
score: 30.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 395..427
e-value: 1.3E-11
score: 44.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 508..536
e-value: 0.31
score: 11.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 10.994242
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 505..539
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 9.010246
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 13.109773
NoneNo IPR availablePANTHERPTHR47003:SF2OS01G0970900 PROTEINcoord: 1..615
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 1..615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001090.1CsaV3_1G001090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
molecular_function GO:0005515 protein binding