Homology
BLAST of CsaV3_1G001080 vs. NCBI nr
Match:
XP_004138266.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sativus] >KGN63534.1 hypothetical protein Csa_013924 [Cucumis sativus])
HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL 60
MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL
Sbjct: 1 MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL 60
Query: 61 ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD 120
ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD
Sbjct: 61 ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD 120
Query: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD
Sbjct: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
Query: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI
Sbjct: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
Query: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL
Sbjct: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
Query: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV
Sbjct: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
Query: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY 480
KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY
Sbjct: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY 480
Query: 481 QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG 540
QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG
Sbjct: 481 QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG 540
Query: 541 RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK 600
RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK
Sbjct: 541 RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK 600
Query: 601 RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN 660
RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN
Sbjct: 601 RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN 660
Query: 661 ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW
Sbjct: 661 ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
BLAST of CsaV3_1G001080 vs. NCBI nr
Match:
XP_016903201.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo] >TYJ98502.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 663/698 (94.99%), Postives = 677/698 (96.99%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIVGCLP SLTSIT QFPENPKSLILQQCKTPKDL+QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ L+EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGMPER IVAWNSMLSGYTKNGLWDEVVKLF+KILEL I FDDVTMISVLMACGRLAN
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYIVSKGLRRNNTL TSLIDMYAKCG++DTARKLF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKGNV PNEVTMVSVLYSCAMLGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS MLE
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
NDVKPNDVTFIGVLSACSHACLVDQGR+LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
QIK LGYVPN + ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC D
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
CHNATK+ISQ FERMIIVRDRNRFHHFKDGLCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of CsaV3_1G001080 vs. NCBI nr
Match:
KAA0057818.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 662/698 (94.84%), Postives = 676/698 (96.85%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIVGCLP SLTSIT QFPENPKSLILQQCKTPKDL+QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ L+EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGMPER IVAWNSMLSGYTKNGLWDEVVKLF+KILEL I FDDVTMISVLMACGRLAN
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYIVSKGLRRNNTL TSLIDMYAKCG++DTARKLF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLMTSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKGNV PNEVTMVSVLYSCAMLGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFF MLE
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFCLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
NDVKPNDVTFIGVLSACSHACLVDQGR+LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
QIK LGYVPN + ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC D
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
CHNATK+ISQ FERMIIVRDRNRFHHFKDGLCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of CsaV3_1G001080 vs. NCBI nr
Match:
KAG7023094.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1257.7 bits (3253), Expect = 0.0e+00
Identity = 621/699 (88.84%), Postives = 659/699 (94.28%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIV CLPNIS+TSIT QFPENPKSLILQ+CKTPKDL+QVHAHLLKTRRL DP I E
Sbjct: 1 MASIVACLPNISVTSITHLSQFPENPKSLILQRCKTPKDLRQVHAHLLKTRRLQDPTIAE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLP++IDYALSIFNH+DKPESSAYNVMIRGLAFK+SP NA+LLFKKMHE SV
Sbjct: 61 AVLESAALLLPNSIDYALSIFNHMDKPESSAYNVMIRGLAFKQSPHNAVLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ALREGEQVHALILKSGFKSNEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRALREGEQVHALILKSGFKSNEFVENTLIHMYANCGQVGVARQ 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGM +R+ VAWNSMLSGYTKNGLWDEVVKLFRK+LEL IEFDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMSQRATVAWNSMLSGYTKNGLWDEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKG+RRN+TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG
Sbjct: 241 LELGELIGEYILSKGIRRNSTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEAL+LFHEMQK V NEVTMVSVLYSCA+LGAYETGKWVH YIK+KKMKLT
Sbjct: 301 YAQADRCKEALDLFHEMQKAKVDANEVTMVSVLYSCAVLGAYETGKWVHSYIKRKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
V+LGTQLIDFYAKCGYIDRSVEVF+ M F NVFTWTALIQGLANNGEGKMAL+FF+ M E
Sbjct: 361 VSLGTQLIDFYAKCGYIDRSVEVFRAMPFANVFTWTALIQGLANNGEGKMALDFFALMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
N+VKPNDVTFI VLSACSHACLVDQGRHLFNSMRR FDIEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NNVKPNDVTFIAVLSACSHACLVDQGRHLFNSMRRGFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFI NMP PPNAVVWRTLLASC+AHKN+EMAEKS +HIT LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIANMPIPPNAVVWRTLLASCKAHKNVEMAEKSFDHITLLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDA+RVRSLIK+KEIKK PGCSLIELDGVVHEFFSEDG+H HSKEIHDALD+MMK
Sbjct: 541 LVGRVEDALRVRSLIKDKEIKKTPGCSLIELDGVVHEFFSEDGDHTHSKEIHDALDEMMK 600
Query: 601 QIKRLGYVPNTDDARLEA-EEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCR 660
+IK LGYVPN +DARLEA EEESKETSVSHHSEKLAIAYGLIRT +TTIRISKNLRMCR
Sbjct: 601 RIKSLGYVPNMEDARLEAEEEESKETSVSHHSEKLAIAYGLIRTPLQTTIRISKNLRMCR 660
Query: 661 DCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
DCHNATK ISQV++R IIVRDRNRFHHFKDGLCSCNDYW
Sbjct: 661 DCHNATKVISQVYKRTIIVRDRNRFHHFKDGLCSCNDYW 699
BLAST of CsaV3_1G001080 vs. NCBI nr
Match:
XP_022921781.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1255.7 bits (3248), Expect = 0.0e+00
Identity = 620/699 (88.70%), Postives = 658/699 (94.13%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIV CLPNIS+TSIT QFPENPKSLILQ+CKTPKDL+QVHAHLLKTRRL DP I E
Sbjct: 1 MASIVACLPNISVTSITHLSQFPENPKSLILQRCKTPKDLRQVHAHLLKTRRLQDPTIAE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLP++IDYALSIFNH+DKPESSAYNVMIRGLAFK+SP NA+LLFKKMHE SV
Sbjct: 61 AVLESAALLLPNSIDYALSIFNHMDKPESSAYNVMIRGLAFKQSPHNAVLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ALREGEQVHALILKSGFK NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRALREGEQVHALILKSGFKPNEFVENTLIHMYANCGQVGVARQ 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGM +R+ VAWNSMLSGYTKNGLWDEVVKLFRK+LEL IEFDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMSQRATVAWNSMLSGYTKNGLWDEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKG+RRN+TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG
Sbjct: 241 LELGELIGEYILSKGIRRNSTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEAL+LFHEMQK V NEVTMVSVLYSCA+LGAYETGKWVH YIK+KKMKLT
Sbjct: 301 YAQADRCKEALDLFHEMQKAKVDANEVTMVSVLYSCAVLGAYETGKWVHSYIKRKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
V+LGTQLIDFYAKCGYIDRSVEVF+ M F NVFTWTALIQGLANNGEGKMAL+FF+ M E
Sbjct: 361 VSLGTQLIDFYAKCGYIDRSVEVFRAMPFANVFTWTALIQGLANNGEGKMALDFFALMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
N+VKPNDVTFI VLSACSHACLVDQGRHLFNSMRR FDIEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NNVKPNDVTFIAVLSACSHACLVDQGRHLFNSMRRGFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFI NMP PPNAVVWRTLLASC+AHKN+EMAEKS +HIT LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIANMPIPPNAVVWRTLLASCKAHKNVEMAEKSFDHITLLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDA+RVRSLIK+KEIKK PGCSLIELDGVVHEFFSEDG+H HSKEIHDALD+MMK
Sbjct: 541 LVGRVEDALRVRSLIKDKEIKKTPGCSLIELDGVVHEFFSEDGDHTHSKEIHDALDEMMK 600
Query: 601 QIKRLGYVPNTDDARLEA-EEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCR 660
+IK LGYVPN +DARLEA EEESKETSVSHHSEKLAIAYGLIRT +TTIRISKNLRMCR
Sbjct: 601 RIKSLGYVPNMEDARLEAEEEESKETSVSHHSEKLAIAYGLIRTPLQTTIRISKNLRMCR 660
Query: 661 DCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
DCHNATK ISQV++R IIVRDRNRFHHFKDGLCSCNDYW
Sbjct: 661 DCHNATKVISQVYKRTIIVRDRNRFHHFKDGLCSCNDYW 699
BLAST of CsaV3_1G001080 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 588.2 bits (1515), Expect = 1.2e-166
Identity = 288/726 (39.67%), Postives = 449/726 (61.85%), Query Frame = 0
Query: 8 LPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLK-----TRRLLDPIITEAVLES 67
LP+ S +P +L CKT + L+ +HA ++K T L +I +L
Sbjct: 20 LPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 79
Query: 68 AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKF 127
LP YA+S+F I +P +N M RG A P +AL L+ M + + +
Sbjct: 80 HFEGLP----YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 139
Query: 128 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQM----------------- 187
TF VLK+C++ KA +EG+Q+H +LK G + +V +LI M
Sbjct: 140 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 199
Query: 188 --------------YANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 247
YA+ G I A+ +FD +P + +V+WN+M+SGY + G + E ++LF+
Sbjct: 200 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 259
Query: 248 KILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG 307
+++ + D+ TM++V+ AC + ++E+G + +I G N + +LID+Y+KCG
Sbjct: 260 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 319
Query: 308 QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLY 367
+++TA LF+ + +DV++W+ +I GY + KEAL LF EM + PN+VTM+S+L
Sbjct: 320 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 379
Query: 368 SCAMLGAYETGKWVHFYIKKKKMKLT--VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNV 427
+CA LGA + G+W+H YI K+ +T +L T LID YAKCG I+ + +VF + K++
Sbjct: 380 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 439
Query: 428 FTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNS 487
+W A+I G A +G + + FS M + ++P+D+TF+G+LSACSH+ ++D GRH+F +
Sbjct: 440 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 499
Query: 488 MRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIE 547
M +D+ + P++EHYGCM+D+LG +G +EA + I+ M P+ V+W +LL +C+ H N+E
Sbjct: 500 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 559
Query: 548 MAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELD 607
+ E E++ ++EP + G Y+LLSN YA GR + + R+L+ +K +KK+PGCS IE+D
Sbjct: 560 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 619
Query: 608 GVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSE 667
VVHEF D H ++EI+ L++M +++ G+VP+T + E EEE KE ++ HHSE
Sbjct: 620 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 679
Query: 668 KLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLC 696
KLAIA+GLI T P T + I KNLR+CR+CH ATK IS++++R II RDR RFHHF+DG+C
Sbjct: 680 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 739
BLAST of CsaV3_1G001080 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 567.8 bits (1462), Expect = 1.7e-160
Identity = 280/703 (39.83%), Postives = 432/703 (61.45%), Query Frame = 0
Query: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPES 86
++++C + + L+Q H H+++T DP + AAL +++YA +F+ I KP S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 87 SAYNVMIRGLAFKRSPDNALLLFKKM-HEKSVQHDKFTFSSVLKACSRMKALREGEQVHA 146
A+N +IR A P ++ F M E +K+TF ++KA + + +L G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 147 LILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDE 206
+ +KS S+ FV N+LI Y +CG + A VF + E+ +V+WNSM++G+ + G D+
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 207 VVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLID 266
++LF+K+ ++ VTM+ VL AC ++ NLE G + YI + N TL +++D
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 267 MYAKCGQVDTARKLFDEMD-------------------------------KRDVVAWSAM 326
MY KCG ++ A++LFD M+ ++D+VAW+A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 327 ISGYAQADRCKEALNLFHEMQ-KGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 386
IS Y Q + EAL +FHE+Q + N+ N++T+VS L +CA +GA E G+W+H YIKK
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 387 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 446
+++ + + LI Y+KCG +++S EVF + ++VF W+A+I GLA +G G A++ F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 447 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 506
M E +VKPN VTF V ACSH LVD+ LF+ M ++ I P +HY C+VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 507 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 566
G+LE+A +FI+ MP PP+ VW LL +C+ H N+ +AE + + LEP + G ++LLS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 567 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 626
N YA +G+ E+ +R ++ +KK PGCS IE+DG++HEF S D H S++++ L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 627 KMMKQIKRLGYVPNTDDA-RLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNL 686
++M+++K GY P ++ EEE KE S++ HSEKLAI YGLI T IR+ KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 687 RMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
R+C DCH+ K ISQ+++R IIVRDR RFHHF++G CSCND+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CsaV3_1G001080 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 541.2 bits (1393), Expect = 1.7e-152
Identity = 270/670 (40.30%), Postives = 398/670 (59.40%), Query Frame = 0
Query: 28 LQQCKTPKDLQQVHAHLLKTRRLLDP-IITEAVLESAALLLPDTIDYALSIFNHIDKPES 87
LQ+C ++L+Q+HA +LKT + D IT+ + + D + YA +F+ D+P++
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 88 SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 147
+N+MIRG + P+ +LLL+++M S H+ +TF S+LKACS + A E Q+HA
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 148 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 207
I K G++++ + N+LI YA G +A +FD +PE V+WNS++ GY K G D
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 208 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 267
+ LFRK+ E
Sbjct: 201 LTLFRKMAE--------------------------------------------------- 260
Query: 268 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 327
++ ++W+ MISGY QAD KEAL LFHEMQ +V P+ V++
Sbjct: 261 -------------------KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 320
Query: 328 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 387
+ L +CA LGA E GKW+H Y+ K ++++ LG LID YAKCG ++ ++EVFK +
Sbjct: 321 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 380
Query: 388 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 447
K+V WTALI G A +G G+ A+ F M + +KPN +TF VL+ACS+ LV++G+ +
Sbjct: 381 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 440
Query: 448 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 507
F SM RD++++P IEHYGC+VD+LGRAG L+EA +FI MP PNAV+W LL +CR HK
Sbjct: 441 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 500
Query: 508 NIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLI 567
NIE+ E+ E + ++P H G Y+ +N +A+ + + A R L+KE+ + K+PGCS I
Sbjct: 501 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 560
Query: 568 ELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLE-AEEESKETSVS 627
L+G HEF + D H ++I M ++++ GYVP ++ L+ +++ +E V
Sbjct: 561 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 620
Query: 628 HHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFK 687
HSEKLAI YGLI+T P T IRI KNLR+C+DCH TK IS++++R I++RDR RFHHF+
Sbjct: 621 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 620
Query: 688 DGLCSCNDYW 696
DG CSC DYW
Sbjct: 681 DGKCSCGDYW 620
BLAST of CsaV3_1G001080 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 533.1 bits (1372), Expect = 4.7e-150
Identity = 268/708 (37.85%), Postives = 423/708 (59.75%), Query Frame = 0
Query: 28 LQQCKTPKDLQQVHAHLLKT--RRLLDPIITEAVLESAALLLPDTIDYALSIFNHI-DKP 87
L CK+ ++Q+HAH+L+T L+ + + S+++ + YAL++F+ I P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSYALNVFSSIPSPP 78
Query: 88 ESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVH 147
ES +N +R L+ P +L ++++ + D+F+F +LKA S++ AL EG ++H
Sbjct: 79 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 138
Query: 148 ALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWD 207
+ K + FVE + MYA+CG+I AR+VFD M R +V WN+M+ Y + GL D
Sbjct: 139 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 198
Query: 208 EVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLI 267
E KLF ++ + + D++ + +++ ACGR N+ I E+++ +R + L T+L+
Sbjct: 199 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 258
Query: 268 DMYA-------------------------------KCGQVDTARKLFDEMDKRDVVAWSA 327
MYA KCG++D A+ +FD+ +K+D+V W+
Sbjct: 259 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 318
Query: 328 MISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 387
MIS Y ++D +EAL +F EM + P+ V+M SV+ +CA LG + KWVH I
Sbjct: 319 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 378
Query: 388 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 447
++ +++ LI+ YAKCG +D + +VF++M +NV +W+++I L+ +GE AL F+
Sbjct: 379 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 438
Query: 448 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 507
M + +V+PN+VTF+GVL CSH+ LV++G+ +F SM +++I P++EHYGCMVD+ GRA
Sbjct: 439 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 498
Query: 508 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 567
L EA + I++MP N V+W +L+++CR H +E+ + + + I LEP H G +L+S
Sbjct: 499 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 558
Query: 568 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 627
N YA R ED +R +++EK + K G S I+ +G HEF D HK S EI+ LD
Sbjct: 559 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 618
Query: 628 KMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRT------TIR 687
+++ ++K GYVP+ ++ EEE K+ V HSEKLA+ +GL+ IR
Sbjct: 619 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 678
Query: 688 ISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
I KNLR+C DCH K +S+V+ER IIVRDR RFH +K+GLCSC DYW
Sbjct: 679 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
BLAST of CsaV3_1G001080 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 4.4e-148
Identity = 264/685 (38.54%), Postives = 409/685 (59.71%), Query Frame = 0
Query: 11 ISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDT 70
+++ S T + K+LI C T L+Q+H L+ D + +L+
Sbjct: 4 VTVPSATSKVQQIKTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK 63
Query: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Y L F+H P YN +I G L LF + + + FTF VLKA
Sbjct: 64 YSYLL--FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 123
Query: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
C+R + + G +H+L++K GF + +L+ +Y+ G++ A +FD +P+RS+V W
Sbjct: 124 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 183
Query: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
++ SGYT +G E + LF+K++E+ ++ D ++ VL AC + +L+ GE I +Y+
Sbjct: 184 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 243
Query: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
+++N+ + T+L+++YAKCG+++ AR +FD M ++D+V WS MI GYA KE + L
Sbjct: 244 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 303
Query: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370
F +M + N+ P++ ++V L SCA LGA + G+W I + + + + LID YAK
Sbjct: 304 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 363
Query: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430
CG + R EVFKEM K++ A I GLA NG K++ F + + P+ TF+G+
Sbjct: 364 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 423
Query: 431 LSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPP 490
L C HA L+ G FN++ + ++ +EHYGCMVD+ GRAG L++AY+ I +MP P
Sbjct: 424 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 483
Query: 491 NAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRS 550
NA+VW LL+ CR K+ ++AE L+ + LEP ++G+Y+ LSN Y++ GR ++A VR
Sbjct: 484 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 543
Query: 551 LIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDD 610
++ +K +KKIPG S IEL+G VHEF ++D H S +I+ L+ + +++ +G+VP T+
Sbjct: 544 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 603
Query: 611 ARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFE 670
+ EEE KE + +HSEKLA+A GLI T IR+ KNLR+C DCH K IS++
Sbjct: 604 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 663
Query: 671 RMIIVRDRNRFHHFKDGLCSCNDYW 696
R I+VRD NRFH F +G CSCNDYW
Sbjct: 664 REIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of CsaV3_1G001080 vs. ExPASy TrEMBL
Match:
A0A0A0LRD6 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G003520 PE=3 SV=1)
HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 695/695 (100.00%), Postives = 695/695 (100.00%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL 60
MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL
Sbjct: 1 MASIVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVL 60
Query: 61 ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD 120
ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD
Sbjct: 61 ESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD 120
Query: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD
Sbjct: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
Query: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI
Sbjct: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
Query: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL
Sbjct: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTL 360
Query: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV
Sbjct: 361 GTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV 420
Query: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY 480
KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY
Sbjct: 421 KPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAY 480
Query: 481 QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG 540
QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG
Sbjct: 481 QFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVG 540
Query: 541 RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK 600
RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK
Sbjct: 541 RVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIK 600
Query: 601 RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN 660
RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN
Sbjct: 601 RLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHN 660
Query: 661 ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW
Sbjct: 661 ATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
BLAST of CsaV3_1G001080 vs. ExPASy TrEMBL
Match:
A0A5D3BFH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001050 PE=3 SV=1)
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 663/698 (94.99%), Postives = 677/698 (96.99%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIVGCLP SLTSIT QFPENPKSLILQQCKTPKDL+QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ L+EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGMPER IVAWNSMLSGYTKNGLWDEVVKLF+KILEL I FDDVTMISVLMACGRLAN
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYIVSKGLRRNNTL TSLIDMYAKCG++DTARKLF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKGNV PNEVTMVSVLYSCAMLGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS MLE
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
NDVKPNDVTFIGVLSACSHACLVDQGR+LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
QIK LGYVPN + ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC D
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
CHNATK+ISQ FERMIIVRDRNRFHHFKDGLCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of CsaV3_1G001080 vs. ExPASy TrEMBL
Match:
A0A1S4E4P2 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103502371 PE=3 SV=1)
HSP 1 Score: 1338.2 bits (3462), Expect = 0.0e+00
Identity = 663/698 (94.99%), Postives = 677/698 (96.99%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIVGCLP SLTSIT QFPENPKSLILQQCKTPKDL+QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ L+EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGMPER IVAWNSMLSGYTKNGLWDEVVKLF+KILEL I FDDVTMISVLMACGRLAN
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYIVSKGLRRNNTL TSLIDMYAKCG++DTARKLF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLITSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKGNV PNEVTMVSVLYSCAMLGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS MLE
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
NDVKPNDVTFIGVLSACSHACLVDQGR+LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
QIK LGYVPN + ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC D
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
CHNATK+ISQ FERMIIVRDRNRFHHFKDGLCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of CsaV3_1G001080 vs. ExPASy TrEMBL
Match:
A0A5A7URN2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001020 PE=3 SV=1)
HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 662/698 (94.84%), Postives = 676/698 (96.85%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIVGCLP SLTSIT QFPENPKSLILQQCKTPKDL+QVHAHLLKTRRLLDPIITE
Sbjct: 1 MASIVGCLPITSLTSITQISQFPENPKSLILQQCKTPKDLRQVHAHLLKTRRLLDPIITE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE SV
Sbjct: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ L+EGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH
Sbjct: 121 QHDKFTFSSVLKACSRMRGLKEGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGMPER IVAWNSMLSGYTKNGLWDEVVKLF+KILEL I FDDVTMISVLMACGRLAN
Sbjct: 181 VFDGMPERGIVAWNSMLSGYTKNGLWDEVVKLFQKILELNIGFDDVTMISVLMACGRLAN 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYIVSKGLRRNNTL TSLIDMYAKCG++DTARKLF+EMDKRDVVAWSAMISG
Sbjct: 241 LEMGELIGEYIVSKGLRRNNTLMTSLIDMYAKCGRIDTARKLFNEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEALNLFHEMQKGNV PNEVTMVSVLYSCAMLGAY+TGKWVHFYIKKKKMKLT
Sbjct: 301 YAQADRCKEALNLFHEMQKGNVDPNEVTMVSVLYSCAMLGAYQTGKWVHFYIKKKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFF MLE
Sbjct: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFCLMLE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
NDVKPNDVTFIGVLSACSHACLVDQGR+LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE
Sbjct: 421 NDVKPNDVTFIGVLSACSHACLVDQGRNLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFID+MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEP HSGDYILLSNTYA
Sbjct: 481 EAYQFIDSMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPTHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDAIRVRSLIKEKEIKK PGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK
Sbjct: 541 LVGRVEDAIRVRSLIKEKEIKKTPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
Query: 601 QIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRD 660
QIK LGYVPN + ARLEAEEE+KETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMC D
Sbjct: 601 QIKTLGYVPNIEGARLEAEEENKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCGD 660
Query: 661 CHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
CHNATK+ISQ FERMIIVRDRNRFHHFKDGLCSC DYW
Sbjct: 661 CHNATKYISQAFERMIIVRDRNRFHHFKDGLCSCKDYW 698
BLAST of CsaV3_1G001080 vs. ExPASy TrEMBL
Match:
A0A6J1E2C2 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111429933 PE=3 SV=1)
HSP 1 Score: 1255.7 bits (3248), Expect = 0.0e+00
Identity = 620/699 (88.70%), Postives = 658/699 (94.13%), Query Frame = 0
Query: 1 MASIVGCLPNISLTSIT---QFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITE 60
MASIV CLPNIS+TSIT QFPENPKSLILQ+CKTPKDL+QVHAHLLKTRRL DP I E
Sbjct: 1 MASIVACLPNISVTSITHLSQFPENPKSLILQRCKTPKDLRQVHAHLLKTRRLQDPTIAE 60
Query: 61 AVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSV 120
AVLESAALLLP++IDYALSIFNH+DKPESSAYNVMIRGLAFK+SP NA+LLFKKMHE SV
Sbjct: 61 AVLESAALLLPNSIDYALSIFNHMDKPESSAYNVMIRGLAFKQSPHNAVLLFKKMHENSV 120
Query: 121 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 180
QHDKFTFSSVLKACSRM+ALREGEQVHALILKSGFK NEFVENTLI MYANCGQ+GVAR
Sbjct: 121 QHDKFTFSSVLKACSRMRALREGEQVHALILKSGFKPNEFVENTLIHMYANCGQVGVARQ 180
Query: 181 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 240
VFDGM +R+ VAWNSMLSGYTKNGLWDEVVKLFRK+LEL IEFDDVTMISVLMACGRLA+
Sbjct: 181 VFDGMSQRATVAWNSMLSGYTKNGLWDEVVKLFRKMLELHIEFDDVTMISVLMACGRLAD 240
Query: 241 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
LE+GELIGEYI+SKG+RRN+TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG
Sbjct: 241 LELGELIGEYILSKGIRRNSTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 300
Query: 301 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 360
YAQADRCKEAL+LFHEMQK V NEVTMVSVLYSCA+LGAYETGKWVH YIK+KKMKLT
Sbjct: 301 YAQADRCKEALDLFHEMQKAKVDANEVTMVSVLYSCAVLGAYETGKWVHSYIKRKKMKLT 360
Query: 361 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 420
V+LGTQLIDFYAKCGYIDRSVEVF+ M F NVFTWTALIQGLANNGEGKMAL+FF+ M E
Sbjct: 361 VSLGTQLIDFYAKCGYIDRSVEVFRAMPFANVFTWTALIQGLANNGEGKMALDFFALMRE 420
Query: 421 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 480
N+VKPNDVTFI VLSACSHACLVDQGRHLFNSMRR FDIEPRIEHYGCMVDILGRAG LE
Sbjct: 421 NNVKPNDVTFIAVLSACSHACLVDQGRHLFNSMRRGFDIEPRIEHYGCMVDILGRAGLLE 480
Query: 481 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 540
EAYQFI NMP PPNAVVWRTLLASC+AHKN+EMAEKS +HIT LEPAHSGDYILLSNTYA
Sbjct: 481 EAYQFIANMPIPPNAVVWRTLLASCKAHKNVEMAEKSFDHITLLEPAHSGDYILLSNTYA 540
Query: 541 LVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMK 600
LVGRVEDA+RVRSLIK+KEIKK PGCSLIELDGVVHEFFSEDG+H HSKEIHDALD+MMK
Sbjct: 541 LVGRVEDALRVRSLIKDKEIKKTPGCSLIELDGVVHEFFSEDGDHTHSKEIHDALDEMMK 600
Query: 601 QIKRLGYVPNTDDARLEA-EEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCR 660
+IK LGYVPN +DARLEA EEESKETSVSHHSEKLAIAYGLIRT +TTIRISKNLRMCR
Sbjct: 601 RIKSLGYVPNMEDARLEAEEEESKETSVSHHSEKLAIAYGLIRTPLQTTIRISKNLRMCR 660
Query: 661 DCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
DCHNATK ISQV++R IIVRDRNRFHHFKDGLCSCNDYW
Sbjct: 661 DCHNATKVISQVYKRTIIVRDRNRFHHFKDGLCSCNDYW 699
BLAST of CsaV3_1G001080 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 588.2 bits (1515), Expect = 8.7e-168
Identity = 288/726 (39.67%), Postives = 449/726 (61.85%), Query Frame = 0
Query: 8 LPNISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLK-----TRRLLDPIITEAVLES 67
LP+ S +P +L CKT + L+ +HA ++K T L +I +L
Sbjct: 20 LPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSP 79
Query: 68 AALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKF 127
LP YA+S+F I +P +N M RG A P +AL L+ M + + +
Sbjct: 80 HFEGLP----YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSY 139
Query: 128 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQM----------------- 187
TF VLK+C++ KA +EG+Q+H +LK G + +V +LI M
Sbjct: 140 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 199
Query: 188 --------------YANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFR 247
YA+ G I A+ +FD +P + +V+WN+M+SGY + G + E ++LF+
Sbjct: 200 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 259
Query: 248 KILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCG 307
+++ + D+ TM++V+ AC + ++E+G + +I G N + +LID+Y+KCG
Sbjct: 260 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 319
Query: 308 QVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLY 367
+++TA LF+ + +DV++W+ +I GY + KEAL LF EM + PN+VTM+S+L
Sbjct: 320 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 379
Query: 368 SCAMLGAYETGKWVHFYIKKKKMKLT--VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNV 427
+CA LGA + G+W+H YI K+ +T +L T LID YAKCG I+ + +VF + K++
Sbjct: 380 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 439
Query: 428 FTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNS 487
+W A+I G A +G + + FS M + ++P+D+TF+G+LSACSH+ ++D GRH+F +
Sbjct: 440 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 499
Query: 488 MRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIE 547
M +D+ + P++EHYGCM+D+LG +G +EA + I+ M P+ V+W +LL +C+ H N+E
Sbjct: 500 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 559
Query: 548 MAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELD 607
+ E E++ ++EP + G Y+LLSN YA GR + + R+L+ +K +KK+PGCS IE+D
Sbjct: 560 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 619
Query: 608 GVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSE 667
VVHEF D H ++EI+ L++M +++ G+VP+T + E EEE KE ++ HHSE
Sbjct: 620 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 679
Query: 668 KLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLC 696
KLAIA+GLI T P T + I KNLR+CR+CH ATK IS++++R II RDR RFHHF+DG+C
Sbjct: 680 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 739
BLAST of CsaV3_1G001080 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-161
Identity = 280/703 (39.83%), Postives = 432/703 (61.45%), Query Frame = 0
Query: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPES 86
++++C + + L+Q H H+++T DP + AAL +++YA +F+ I KP S
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNS 95
Query: 87 SAYNVMIRGLAFKRSPDNALLLFKKM-HEKSVQHDKFTFSSVLKACSRMKALREGEQVHA 146
A+N +IR A P ++ F M E +K+TF ++KA + + +L G+ +H
Sbjct: 96 FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 147 LILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDE 206
+ +KS S+ FV N+LI Y +CG + A VF + E+ +V+WNSM++G+ + G D+
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 207 VVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLID 266
++LF+K+ ++ VTM+ VL AC ++ NLE G + YI + N TL +++D
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 267 MYAKCGQVDTARKLFDEMD-------------------------------KRDVVAWSAM 326
MY KCG ++ A++LFD M+ ++D+VAW+A+
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 327 ISGYAQADRCKEALNLFHEMQ-KGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 386
IS Y Q + EAL +FHE+Q + N+ N++T+VS L +CA +GA E G+W+H YIKK
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 387 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 446
+++ + + LI Y+KCG +++S EVF + ++VF W+A+I GLA +G G A++ F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 447 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 506
M E +VKPN VTF V ACSH LVD+ LF+ M ++ I P +HY C+VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 507 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 566
G+LE+A +FI+ MP PP+ VW LL +C+ H N+ +AE + + LEP + G ++LLS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 567 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 626
N YA +G+ E+ +R ++ +KK PGCS IE+DG++HEF S D H S++++ L
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 627 KMMKQIKRLGYVPNTDDA-RLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNL 686
++M+++K GY P ++ EEE KE S++ HSEKLAI YGLI T IR+ KNL
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNL 695
Query: 687 RMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
R+C DCH+ K ISQ+++R IIVRDR RFHHF++G CSCND+W
Sbjct: 696 RVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CsaV3_1G001080 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 541.2 bits (1393), Expect = 1.2e-153
Identity = 270/670 (40.30%), Postives = 398/670 (59.40%), Query Frame = 0
Query: 28 LQQCKTPKDLQQVHAHLLKTRRLLDP-IITEAVLESAALLLPDTIDYALSIFNHIDKPES 87
LQ+C ++L+Q+HA +LKT + D IT+ + + D + YA +F+ D+P++
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 88 SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 147
+N+MIRG + P+ +LLL+++M S H+ +TF S+LKACS + A E Q+HA
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 148 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 207
I K G++++ + N+LI YA G +A +FD +PE V+WNS++ GY K G D
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 208 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 267
+ LFRK+ E
Sbjct: 201 LTLFRKMAE--------------------------------------------------- 260
Query: 268 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 327
++ ++W+ MISGY QAD KEAL LFHEMQ +V P+ V++
Sbjct: 261 -------------------KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 320
Query: 328 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 387
+ L +CA LGA E GKW+H Y+ K ++++ LG LID YAKCG ++ ++EVFK +
Sbjct: 321 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 380
Query: 388 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 447
K+V WTALI G A +G G+ A+ F M + +KPN +TF VL+ACS+ LV++G+ +
Sbjct: 381 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 440
Query: 448 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 507
F SM RD++++P IEHYGC+VD+LGRAG L+EA +FI MP PNAV+W LL +CR HK
Sbjct: 441 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 500
Query: 508 NIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLI 567
NIE+ E+ E + ++P H G Y+ +N +A+ + + A R L+KE+ + K+PGCS I
Sbjct: 501 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 560
Query: 568 ELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLE-AEEESKETSVS 627
L+G HEF + D H ++I M ++++ GYVP ++ L+ +++ +E V
Sbjct: 561 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 620
Query: 628 HHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFK 687
HSEKLAI YGLI+T P T IRI KNLR+C+DCH TK IS++++R I++RDR RFHHF+
Sbjct: 621 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 620
Query: 688 DGLCSCNDYW 696
DG CSC DYW
Sbjct: 681 DGKCSCGDYW 620
BLAST of CsaV3_1G001080 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 533.1 bits (1372), Expect = 3.3e-151
Identity = 268/708 (37.85%), Postives = 423/708 (59.75%), Query Frame = 0
Query: 28 LQQCKTPKDLQQVHAHLLKT--RRLLDPIITEAVLESAALLLPDTIDYALSIFNHI-DKP 87
L CK+ ++Q+HAH+L+T L+ + + S+++ + YAL++F+ I P
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSI----NLSYALNVFSSIPSPP 78
Query: 88 ESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVH 147
ES +N +R L+ P +L ++++ + D+F+F +LKA S++ AL EG ++H
Sbjct: 79 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 138
Query: 148 ALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWD 207
+ K + FVE + MYA+CG+I AR+VFD M R +V WN+M+ Y + GL D
Sbjct: 139 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 198
Query: 208 EVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLI 267
E KLF ++ + + D++ + +++ ACGR N+ I E+++ +R + L T+L+
Sbjct: 199 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 258
Query: 268 DMYA-------------------------------KCGQVDTARKLFDEMDKRDVVAWSA 327
MYA KCG++D A+ +FD+ +K+D+V W+
Sbjct: 259 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 318
Query: 328 MISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKK 387
MIS Y ++D +EAL +F EM + P+ V+M SV+ +CA LG + KWVH I
Sbjct: 319 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 378
Query: 388 MKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFS 447
++ +++ LI+ YAKCG +D + +VF++M +NV +W+++I L+ +GE AL F+
Sbjct: 379 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 438
Query: 448 SMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRA 507
M + +V+PN+VTF+GVL CSH+ LV++G+ +F SM +++I P++EHYGCMVD+ GRA
Sbjct: 439 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 498
Query: 508 GFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLS 567
L EA + I++MP N V+W +L+++CR H +E+ + + + I LEP H G +L+S
Sbjct: 499 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 558
Query: 568 NTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALD 627
N YA R ED +R +++EK + K G S I+ +G HEF D HK S EI+ LD
Sbjct: 559 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 618
Query: 628 KMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRT------TIR 687
+++ ++K GYVP+ ++ EEE K+ V HSEKLA+ +GL+ IR
Sbjct: 619 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 678
Query: 688 ISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 696
I KNLR+C DCH K +S+V+ER IIVRDR RFH +K+GLCSC DYW
Sbjct: 679 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
BLAST of CsaV3_1G001080 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 526.6 bits (1355), Expect = 3.1e-149
Identity = 264/685 (38.54%), Postives = 409/685 (59.71%), Query Frame = 0
Query: 11 ISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDT 70
+++ S T + K+LI C T L+Q+H L+ D + +L+
Sbjct: 4 VTVPSATSKVQQIKTLISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTK 63
Query: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Y L F+H P YN +I G L LF + + + FTF VLKA
Sbjct: 64 YSYLL--FSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 123
Query: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
C+R + + G +H+L++K GF + +L+ +Y+ G++ A +FD +P+RS+V W
Sbjct: 124 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 183
Query: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
++ SGYT +G E + LF+K++E+ ++ D ++ VL AC + +L+ GE I +Y+
Sbjct: 184 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 243
Query: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310
+++N+ + T+L+++YAKCG+++ AR +FD M ++D+V WS MI GYA KE + L
Sbjct: 244 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 303
Query: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370
F +M + N+ P++ ++V L SCA LGA + G+W I + + + + LID YAK
Sbjct: 304 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 363
Query: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430
CG + R EVFKEM K++ A I GLA NG K++ F + + P+ TF+G+
Sbjct: 364 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 423
Query: 431 LSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPP 490
L C HA L+ G FN++ + ++ +EHYGCMVD+ GRAG L++AY+ I +MP P
Sbjct: 424 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 483
Query: 491 NAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRS 550
NA+VW LL+ CR K+ ++AE L+ + LEP ++G+Y+ LSN Y++ GR ++A VR
Sbjct: 484 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 543
Query: 551 LIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDD 610
++ +K +KKIPG S IEL+G VHEF ++D H S +I+ L+ + +++ +G+VP T+
Sbjct: 544 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 603
Query: 611 ARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFE 670
+ EEE KE + +HSEKLA+A GLI T IR+ KNLR+C DCH K IS++
Sbjct: 604 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 663
Query: 671 RMIIVRDRNRFHHFKDGLCSCNDYW 696
R I+VRD NRFH F +G CSCNDYW
Sbjct: 664 REIVVRDNNRFHCFTNGSCSCNDYW 685
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_004138266.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucumis sa... | [more] |
| XP_016903201.1 | 0.0e+00 | 94.99 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-... | [more] |
| KAA0057818.1 | 0.0e+00 | 94.84 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
| KAG7023094.1 | 0.0e+00 | 88.84 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| XP_022921781.1 | 0.0e+00 | 88.70 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9LN01 | 1.2e-166 | 39.67 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| O82380 | 1.7e-160 | 39.83 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| Q9FJY7 | 1.7e-152 | 40.30 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
| O23337 | 4.7e-150 | 37.85 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
| Q9SR82 | 4.4e-148 | 38.54 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LRD6 | 0.0e+00 | 100.00 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0035... | [more] |
| A0A5D3BFH8 | 0.0e+00 | 94.99 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S4E4P2 | 0.0e+00 | 94.99 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
| A0A5A7URN2 | 0.0e+00 | 94.84 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A6J1E2C2 | 0.0e+00 | 88.70 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G08070.1 | 8.7e-168 | 39.67 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G29760.1 | 1.2e-161 | 39.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G66520.1 | 1.2e-153 | 40.30 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G14820.1 | 3.3e-151 | 37.85 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G08820.1 | 3.1e-149 | 38.54 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
