CsaV3_1G000550 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000550
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionprotein indeterminate-domain 16
Locationchr1: 310653 .. 319106 (-)
RNA-Seq ExpressionCsaV3_1G000550
SyntenyCsaV3_1G000550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAATTATAAGGATCAGAGTGATATGTTGTATGGTCGTTGTATATAAGAATGTAAACTCCACATCGACAATCATGGAAAAGAAAGAGGGATGGGTAAAACGGTAATTTCATGGGCCATTTTGTTATATATATAGGTGCAAGTTTCTGCCATTTCATTCAGAGTCTGTTTCCATTGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAGAGAGAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTTCTTTTAGTTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTCTTTTTAATTAATCATTTAAATCAAGTAAACTAGAGAAGGAGAAGAAAAAAAATGGGGTTCTTAATTAGTTGGATCATTATCTTCTTTGATCATCAACAATTACACATTAAATAATTCAAAATTGGAGTTCAAATTCAATTTTGTTTTGGAAATTAAATTTCTTGGTTGTTTAGTGAATTAAGTTTGTATGATATTTTAATATATTATTAATAATTATATGGATGATTTGTTTATGACATTTTTATTTTTCCAAGTAGTGATAGTGTGAAGATCATCTTGTCTATATTTTATTAGATTGCCTTTTTTCCCCTTTTTTCTTTTTGCTTTTCTGGAAAATCTCGTTTTTGTTATCACAAATCACACGACCCTGACTGATGTGTTTACAAATAATTGAAGAACTGTTCTCTCTCTCACACTCTCTCTCTTTTCTTTTTATGTTTTTTTGTTTTTAAATTTTCCATTTAATTAAAGAAAATAATCATTCTATTTTGTGTTACACATTTAATTTATTAGTTTATGCATGTATAAAAAAGGCCATCAATCTTTGAGTCATAATAGTTATAATTAGCACAACATTTTTCTTATGAGAAATTGGTTGATATATATGATTGACAACTTTATTATTTGATTGAATAATTGACATAGTATGTGTTTATATGGTTCAAATTTACACAAATAAAGGAATTGAGTATTAGAGGAATGTTGTGAATTGATGATTTTTTTAGTTTAATCAGTCACAATCTTAAAGATGAAGAAAAAGAAACAAAAGATGGATATCTATATATAGAATGTTTAGAGTAGTACATAAATGTGATTGAAGATTGAGTAATGTTCACATAATTATTATTTGTTAATTATTTGAAGGGTTTTGAGTATAGATTATAACATTATTTTTTATTTGCAATCAATGGGATTGGTATGGATCCCATTTTGAGTAAAGAATGAGCAAGACTTTCCAACCACATACACCTTGTTTGGATGAAAATATACATGCAATGTTAAATAAACTATATGCCATTTTGACTCATTAATTTTTCTTCATAGCTTTGTATGCTTGACTGTTTGTATATGAAACTACTAACATTAGTGAAAAATACCATCCACCCATCTCCTGAATTAATCCTCATGGACCATTGCATGCATAAAATGATATATATAACTATTTTGTTCTAGCTTAATAATTAATTAATTTGTATTCTTGAGCTTTTCATCTTAAACCTAACTTTAGGGTTTGAAAACATTGAAGCTAGGAGGAAAGGACTGAAATTGTGAGTGAGAGATTGAACTTTTGGGTGATGAACTAAGCTGAATTTGGTTAGTACTAAGAAAAGATTTATAAAAATAGAGAGGAAAAGGAAGAAGAATCCTTAAAAACAAAGATATTCATATAGAGAGAGGGAATATTCATTAAGAGAGAGAGAAGGAGCACTGAAATTGAGAGAGAATAGGGGAAAAGAAGGAAAGAGTCAAAGGTCAAAAGAGAAAAGAAAATATATGTAAGGAAAGAAAGGGAGATGTGGATGGAGAGAAAGGCAAATGAATCAGAACAAAAAGTGAGAAATGGATAGGGAAGAAGAAGACAGAGAGATAGCTGTACAAATTTTGTTTTCAAGTTATTTAACTTTACCTCTCATCCTAACCAAACACCAAACATCCCCACTATCACTGTCTCCAATTCCCACCATTTTCATTCCCAATTCCCTTCTAACCCTAACCCTAAAACCACACCATATTCTATAACGTATAACTATTTCTCTTTACAAAAACCTACCCTTTAACAATGCACTTCTTCCATCTTCCTCTCTAATTGCCTTGCCACCCCCTACAGTCGGGGCAAATGGAATTTAGGGTTTCTCATCATTCCTGAGAGATTTTGACATTTTTAATTTTGATGGGCATGTGCAGAAAGGTACATGAATGATGAATAGTGATTCTCGGTTTTTTTTTTCTCTTTTATTCCTTGAATACTTGAATAAAAGTCAAGTTTAGTTTTGAATTGTGATGGGGTGTCAAGAAAAAAGGTTTACCTAGAAATGGTAATTTGGGGGGTGGTTCTGATGTTCAAAAAAGCACTCAGTTTGTCAGACTCACATCATATCAAGTCAAAGTTTTATCATTTCAGAAACTAACGACAGTTTAATTTGTCTTTTTGAGTGTTATTTAAACACAAATCTTTTCAAATGTAAAAAAACCATACATATTTTCAATATATTTCTCCTACTGTGGAAGTATATAATAATGTTTCCCAAAACCAACCTAGTTCGTTTGATGAGATTATACTCCAACTTTGATGTTTCCTACAACAATACGTAGTTAATGAGATCGTCGAAGCGGCGTATAGAGAATTATTTTATCTTTTTGTCATTGTGCTTATAATCTAGTTGCTTATTTTTTTTCTTAGTAATTTTTTCTCCTCCACTCGACCTTAATTAATTATTTAAGGATTAATGAAGCTTGTTTTTAGTTTGATTGTAAATTAGAATTTATTGGGACTGAGTAAACACAAACGTGGAAGTTAGGAATATAATGAGAAGATCATCAAAGAAGTTGAATATACAAAGGGCAATAGGTGGAGTTTGGAATATATAGCTAGGGGGAGCGTGTTGTCGCATATGTATGAAAGGAATATATATATATGTGTGTGTGTGTGTATGTATATGTATGTATAGATCAAATATGGTTTCATTAAGAGTAGTCATGATCTCCATGGTAGCACCTAGAGAGAAGGGAAGTGGAGCAGCCAATTATTTTCAGAGTAAAGTCTCTCGAAGAGGAGTGGGGGAAAAAAGGAAGTAGGACATGCCTTGTCCTAACCTTCAAACTACACAGCTGATTCCCATCATGACTAAACCTTAACATTTTGTCCTTTCACCTTGTCCGTATTATGCATCCCAACAGATTCTCGAATGATTAAAGATATGTTTGGAATGACTTATTTCTACGTAACAATGTTTTTAAACTCGATCATGAATCGATATATGATATAATGTAAATGAAATATATTCACAGGCGTTTTAACTGTTGATGAGAAGAGATATATAAACTTTTCTTTTCTTAGTCGTTTCAGCTTTTTCAAGAAACATCCATCAGAAGCAGAAGGTCGTACGGGTACAATCAACAGTGATGAATCTGGGTTTGGGTTGGACAACAATTATGGATTCGATTAAAGAGATGCTTCCAAAATTAAACATCAAAATAATTCAAACTGTCAGAAGGCAAAGGAAAAAAAATATATATACACTTTTTTATTTGCTTTAAAGGGTCTTACAAATTGGTAGCTGAAATGCTGATACAAAGTTTTTAAAGTGGTCAGGGGCTGCATATTTTTGGAGGGCTTTCTCTCTCGGAAATGGTCAAACTAATCTTAAAAAATGTTTTAATTTCCTCTTTCTTACTCTTTTTTTTATGTTTCTTTGAAATGGGTTTTTATTGTTCTTCAGTTCTTCTTGACCTTGAAAATGACACAATCTTAAAATGGGACTTCCAAATGAAATTTGATGTTTTGAAAACAAATTTGATGAAATTACTGAATCATGCTCCTGATTCTCGCCTTCGTCTTCTGTTTCTCGTTCGTGCTATTAGAACTACAACTTTTTGTTTTAATCATATCTGCTGGGTCCTTCTTCTTCCTTTCTCGGCCTCTTGAATAAAAAAATGAAAGTTAAAATGTGAATCAAAGCAAGACAAAGGAGCCAGAGGAAGAAGCAAAGATCGAGACCAAGGAGTGAGAGAAGAAGAAGCGACAGGAAGAATATGAATGGATCGCAAGAACTCATGGGTGCGTTTGACCCTTACACACGTCTTGGATTCAAATGAGTACTTTCACATGTAACTTAGCATGTATCCATTTTTCATTCATTTTGTAATCTTGAGTCAAATTAAACAATTTTCCAAAAGATATGGTGTGAGAGAGTTTGGAAAATGTTAGTAACCAACCTAAAAAGATTTTCAGCTTTCACAACTAGCAATTTTTGTTGGAGAATGTTAGATGTGCAATAAAAAGAAGTTAAAAAAAAAACTATTTAAATTTCTCAAAAAAAAGAAGTTATGGTTGGAAAAGATAAAAGTATTTGAAGGTTAATTTTGACCATTTCTCCCGTTGTTTATTCATAGACCGTGGCGGTGTGTGTGGAGCTTATGATGGTGAGGTCAAGGATGGTAAATTTCCAGATATGACAACCTTTTACCATTCTCTTTCTAGGTAAGAGAGAGAGAGAATTAGGGAGAGAAAGTGATGAAAGATTTGATGGTCTTGTCATATCAAGGCCCAATGAAGGGAAAGGTAGCTTTCATTTGAAGCTATAAAAGTTGAAAAATCAGGTATAATGGTTATTGCATAGTGGGACTCAGCTCCTTTGGAAGTCAGAAACTTTAGCATGTGGAATCGAGATTCAATTTAATCAGATGCAATTTGTGGTAACATATATAACAAAATTGGGATACTTCATGATCCAATCTTTCTTTCCATCTTTCCTGTTTGGCCAATCTCATAAATACCAAAAAATCCCAACACTGAATTATATACCTCCCCTTTTTGGTTGTAATAATTGGAATTCCAAACACTTTCCTTTTCTCATTCTACTCTTACCTCACTTGTGACTTGTCCTCTCTGGAAGGACGACATCCTAACTGTAGATTTCTCGACGGATGATCAATTGTAGGCGGTCGCCGTAATCTTTCTCTGATATGTTTCAGGTTCTTCAACCTATGATGGATGCCCTGTTTCTTAATGCAACTTCAAACAGAATCATTCTGTGTGTAAGAATACTGGGTTTCTTACTTGTTTACTACAGTGTTCTTTCGTGGTTGCATTCGACAACTATTTTGAATTGTATTTCATTACTTGAGTCCAAATTCAATACTAGTTTTTCAGTTGTTGATGGAAGTACTTTTATCAATCTCATCAAACAGAGGAAGTGATACATAATTGGATGTCATTGATTCCCTGGCGTTCAAAATGAAGACTTCAAGTTCGTAAAAGACCTGAAAAGAAGCGGTGAGAGCCACTAAAAATAGGGTCGTCGTGGGATCTACCTAAAGAAAAAAGAGATAATAGTTAAAAGAAAAAAGGCATTGTTTCACGAATCATTGGATTTGGAATGATTCTCAGTTTCTCATTCCCATTTCGAAACTGTAAGCATGGCCCGAGTGTTGAAAGAGATGAAATGACCAGAAAGTAGAAGAGACAACAAAGCATAATTTAAGTAGAGATGGATCTCTTACAACATTGTTTATAAGAAAAAGCGACCAGAAACTAACAAAACAAACTAAAGGAGATGGAAGGGGAAAAATGTACATAGGGAGAAACATAAAATGGTGAAGTGAAAATGGATTAAATTATTCATATTAGTATGAGCGTCTTCCATCTCCTTCTGTGATCACATCTTTGAAAGCACCACCACTAGGAATCATAGGCAGCACATGTTCTTGATGCGGTACAATCACATCCAACATGTAAGGCCCTTCTGTCTCCAGCATCTTCTTCATTGCTGCTCTTAACTCAGCCTTCTTTGTCACGCGTGCAGCAGGGATCCCACACGCCTCTGCAAACTTCAACATGTTGGGGAATATCTCAGATTCGTTCGATGGATTTCCCAGGTAAGTGTGAGCTCTGTTGGCTTTGTAGAACCGATCCTCCCACTGCACAACCATGCCTAGATGCTGGTTGTTCAGCAGCAGGATCTTCACTGGAAGTTTCTCGACACTGATTGTTGCTAGTTCTTGGACATTCATGATAAAACTCCCGTCCCCGTCGATGTCTACAACCACTGCACCAGGATTTGCTACTGCTGCCCCCATGGCTGCTGGCAGTCCAAAACCCATTGCACCTAATCCACCGGAGGTTAACCACTGGCGTGGCTTCTTGTACTTGTAGAACTGAGCTGCCCACATCTGATGCTGCCCCACCCCTGTGCTAACGATCGCCTCGCCGTTGGTTAGCTCATCAAGGAGTTGAATTGCATATTGTGGAGGAATGGCCTCATCAAATGTTTTGAAAGTCAATGGATATTTTGATTTCTGCTCATTCAGCTCCTCTCTCCAAGCAGAGAAATCAAAGTGAAGCATATGAGCTTTCTCAAGTAAACGATTCATTCCCTGTAAGGCTAACTTCACATCGCCACAGACCGAAACATGGGGCTGCTTGTTTTTCCCAATCTCAGCTGAATCAATATCGATATGAACGATTTTGGCACGGCTCGCAAAAGCCTCAAGCTTCCCTGTCACACGGTCATCGAATCTCACTCCAAATGCAAGCAAGAGGTCAGATTTATCTACAGCATAGTTTGCATAAACTGTCCCATGCATGCCCAGCATTTGCAGAGATAAATCATCAGAGCAAGGATAAGCCCCAAGACCCATCAGAGTACTGGCCACCGGAATCCCGGTCAGCTTGACAAACCTCCGCAGCTCCTCCGAGGAATTCAAACACCCTCCACCCACATAAAGAACAGGCTTCTTAGATTCAGAGATCAATCGCAAAATTTGCTCCAAGTGGGAATCAGTGGGAGGTTTAGGTAACCTAGACAAGTAACCAGGTAATTTCATGGGTTGATTCCAATTAGGAACCGCGAGCTGTTGCTGAACGTCCTTAGGAATATCAATAAGAACAGGACCAGGTCGACCAGAACTCGCGAGGAAAAATGCCTCGCTCACAATCCTAGGAATGTCATCTACATCAAGAACCAGATAATTGTGCTTTGTAATAGAGCGAGTTACCTCAACAATGGGAGTTTCCTGAAAAGCATCTGTACCAATCATTCTCCTAGGAACTTGCCCTGTAATGGCCACCAATGGAACGCTATCGAGAAGAGCATCTGCAAGTCCGCTGACAAGATTAGTAGCACCGGGACCTGAAGTTGCAATGCAAACGCCAGGGAGGCCAGAGGAACGAGCGTAACCCTCGGCAGCAAATACGCCACCCTGCTCGTGGCGGGGGAGAACGTTACGGATAATTGAAGAGCGGGTGAGGGCCTGATGGATCTCCATTGAAGCGCCACCGGGGTAAGCGAAGACATTAGTGACGCCTTGGCGCTCGAGAGCTTCAACGAGGATATCGGCGCCTTTTCTCGGTTCATCAGCGGCGAATCGGGAGGCGAAAATCTCAGAGCTGGTGATGGAGGAAGTTTCGACGGTAGCGGCGGAGGCGGCAGTGGAGGAGGGTTTAGGGGAAGGATTGGAGAGAGAGGTTGAGCAGATGCGGAGAGAGCGGCGGAAAGTGGGGTTGTGAGGAAGAGAGGAAAATGAAAGATCGAATCTGGAGAAGGGTTTGGTAAGGTTGAAGGAGGGGGATTTGGAGAAGGATTTGGAGGCGCATGGTGAAGCAGCCGCCGCCATTGATGACATGGTGAAGGAAGAAGGAGGAGATGAGAAAGCAGGAGGGAAATGGTGTGGAAAGTAGTGGTTCTCAGTGATATAAGGATTTATAGTTAAATTATTTAACCAAATTTTATTACCTCTACTTACCCTTCGAAGCCATTAGTCAATTCCACAAAAAGTTACCATTTTCATTTATTCTTATTTTTTTATAATTAAAAAGAAAATTAACGGTTCTC

mRNA sequence

ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGTCGTTTCAGCTTTTTCAAGAAACATCCATCAGAAGCAGAAGGTCGTACGGGTACAATCAACAGTGATGAATCTGGGTTTGGGTTGGACAACAATTATGGATTCGATTAA

Coding sequence (CDS)

ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCGACGTCCCACATATCGTCTCGTCCATCTGACTCCTCCTCGTTACGGTTCCGTTCCGATCCATTATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGTCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGCGGAGTGCTTGTTCAAGTATGAGGAGGTGATGAAGCCTGAGGCAGCGAGCTGTGTGGACGCGCTCAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAGAAAGCTGAAAGAATGAAAGAAAGAGCTACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGTCGTTTCAGCTTTTTCAAGAAACATCCATCAGAAGCAGAAGGTCGTACGGGTACAATCAACAGTGATGAATCTGGGTTTGGGTTGGACAACAATTATGGATTCGATTAA

Protein sequence

MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISLRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQSRFSFFKKHPSEAEGRTGTINSDESGFGLDNNYGFD*
Homology
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BLAST of CsaV3_1G000550 vs. NCBI nr
Match: KAE8652381.1 (hypothetical protein Csa_014379 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 2.9e-105
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQSRFSFFKKHP 180
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQSRFSFFKKHP
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQSRFSFFKKHP 180

Query: 181 SEAEGRTGTINSDESGFGLDNNYGFD 207
           SEAEGRTGTINSDESGFGLDNNYGFD
Sbjct: 181 SEAEGRTGTINSDESGFGLDNNYGFD 206

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BLAST of CsaV3_1G000550 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus])

HSP 1 Score: 318.2 bits (814), Expect = 5.4e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 170

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BLAST of CsaV3_1G000550 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.1e-75
Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 166

[Close]
BLAST of CsaV3_1G000550 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa])

HSP 1 Score: 289.7 bits (740), Expect = 2.1e-74
Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAA+EKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 166

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BLAST of CsaV3_1G000550 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida])

HSP 1 Score: 271.9 bits (694), Expect = 4.4e-69
Identity = 156/170 (91.76%), Postives = 158/170 (92.94%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSD  FEA   GSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSD-AFEAAGPGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRP     AECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRP----AAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 163

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BLAST of CsaV3_1G000550 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.5e-08
Identity = 32/75 (42.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 96  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 155
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 156 QMDSTCMEITCQSCR 170
           ++ ST M++TCQ+C+
Sbjct: 395 KISSTIMQVTCQTCK 409

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BLAST of CsaV3_1G000550 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.2e-06
Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 106 EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITC 165
           E   AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E A +++++T MEITC
Sbjct: 268 EARKAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITC 327

Query: 166 QSCRQ 171
            SC+Q
Sbjct: 328 HSCKQ 332

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 111 ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 170
           E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q
Sbjct: 315 EEARRETKRQIEIAELEFAEAKRIRQHARAELHKAHLFREEASRRISATMMQITCHNCKQ 374

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match: A0A0A0LRS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 170

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.4e-75
Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 166

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.4e-75
Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 166

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.9e-75
Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISL 60
           MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISL
Sbjct: 1   MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISL 60

Query: 61  RPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKRE 120
           RPIRPVTAGG ECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAA+EKAYAERVRELTKRE
Sbjct: 61  RPIRPVTAGG-ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAIEKAYAERVRELTKRE 120

Query: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 166

[Close]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match: A0A6J1E4S8 (protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC111429927 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.3e-66
Identity = 150/171 (87.72%), Postives = 160/171 (93.57%), Query Frame = 0 

Query: 1   MEDEDQKELQLLPTPHSIA-SSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSIS 60
           MEDEDQKELQLLPTPH+IA SSS+SH+SSRPS +SS+RFRSDP +EAG  GS+DLQLSIS
Sbjct: 1   MEDEDQKELQLLPTPHTIASSSSSSHMSSRPS-ASSMRFRSDP-YEAGP-GSLDLQLSIS 60

Query: 61  LRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKR 120
           +RPIRP     AEC+FKYEEVMKPEAASCV+ALKWQAAEQIRLAAMEKAYAERVRELTKR
Sbjct: 61  VRPIRPT----AECVFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKR 120

Query: 121 EIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           EIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Sbjct: 121 EIELAQTEFGRARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 164

[Close]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-30
Identity = 89/173 (51.45%), Postives = 113/173 (65.32%), Query Frame = 0 

Query: 2   EDEDQKELQLLPTPHSIASSSTSHISSRP----SDSSSLRFRSDPLFEAGSGGSVDLQLS 61
           + +  KELQLLP+P S  S    H   RP    +D  +   RS  +        +DL+LS
Sbjct: 4   QQDHHKELQLLPSPPSTESPVRKH---RPTVITTDHHNNHHRSSSMIH----HDLDLKLS 63

Query: 62  ISLRPIRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELT 121
           ISL  I              EE+  P     V+ALKWQAAEQIRLAA+EKAYAERVRELT
Sbjct: 64  ISLSSISTA-----------EEL--PNGG--VEALKWQAAEQIRLAAIEKAYAERVRELT 123

Query: 122 KREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ 171
           +RE+E+AQ+EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQ
Sbjct: 124 RREMEMAQSEFARARVMWQKAREEVERAERLKERSMTKIDTACLEITCHSCRQ 154

[Close]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 32/75 (42.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 96  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 155
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 335 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 394

Query: 156 QMDSTCMEITCQSCR 170
           ++ ST M++TCQ+C+
Sbjct: 395 KISSTIMQVTCQTCK 409

[Close]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 32/75 (42.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 96  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 155
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 246 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 305

Query: 156 QMDSTCMEITCQSCR 170
           ++ ST M++TCQ+C+
Sbjct: 306 KISSTIMQVTCQTCK 320

[Close]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein )

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-09
Identity = 32/75 (42.67%), Postives = 58/75 (77.33%), Query Frame = 0 

Query: 96  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATR 155
           A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +
Sbjct: 336 ASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMK 395

Query: 156 QMDSTCMEITCQSCR 170
           ++ ST M++TCQ+C+
Sbjct: 396 KISSTIMQVTCQTCK 410

[Close]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 28/65 (43.08%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 106 EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITC 165
           E   AE  R+  KR+IE+A+ +F +A+++ E A+ E+EKA  ++E A +++++T MEITC
Sbjct: 268 EARKAEETRQEAKRQIEMAEKDFEKAKRIREEAKTELEKAHVVREEAIKRINATMMEITC 327

Query: 166 QSCRQ 171
            SC+Q
Sbjct: 328 HSCKQ 332

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000550 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652381.12.9e-105100.00hypothetical protein Csa_014379 [Cucumis sativus][more]
XP_004138047.15.4e-83100.00protein indeterminate-domain 16 [Cucumis sativus][more]
XP_008464429.17.1e-7596.47PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein in... [more]
KAA0057771.12.1e-7495.88protein indeterminate-domain 16 [Cucumis melo var. makuwa][more]
XP_038878928.14.4e-6991.76protein indeterminate-domain 16 [Benincasa hispida][more]
BLAST of CsaV3_1G000550 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IPE33.5e-0842.67Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5... [more]
Q9FRH44.2e-0643.08Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV... [more]
Q9C9X77.2e-0645.00Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV... [more]
BLAST of CsaV3_1G000550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRS82.6e-83100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1[more]
A0A5D3BFD13.4e-7596.47Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3CN023.4e-7596.47protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=... [more]
A0A5A7UWD19.9e-7595.88Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1E4S81.3e-6687.72protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC1114299... [more]
BLAST of CsaV3_1G000550 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48550.11.5e-3051.45BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:... [more]
AT2G01940.12.5e-0942.67C2H2-like zinc finger protein [more]
AT2G01940.22.5e-0942.67C2H2-like zinc finger protein [more]
AT2G01940.32.5e-0942.67C2H2-like zinc finger protein [more]
AT1G25250.13.0e-0743.08indeterminate(ID)-domain 16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..38
NoneNo IPR availablePANTHERPTHR34946:SF2OS03G0310200 PROTEINcoord: 1..171
IPR039288Zinc finger protein SHOOT GRAVITROPISM 5-likePANTHERPTHR34946OS03G0310200 PROTEINcoord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000550.1CsaV3_1G000550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009630 gravitropism