CsaV3_1G000460 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGTAGCCCACAATGGTTCAAAGCCCATAAGCAACATTGGGCCACTGAAACAACAAAGGCAGATGTTTGTATCGCTCTCTGCCCTCTCCGACTTGCCACGAGCTGAATCACACACCGCGCTCGCTTTCTGCTCTAGCAATGGCAGCTCTAGCTCGTTTCTCCCGCAAGGCTATTGCCTCAGCGGTTGCCACCAATCAACTCCGCCGTGCTTTCTCGACCCAAGTGTCCAAAACGATCACGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGACAGATAATCCCGCTCGGTCAGTGGCTCCCCACAATCGCCGTCGACGCCTATGTTGCACCTAATGTGGTTCTTGCCGGACAGGTTAAAGTCTGCGACGGGGCCTCTGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATTACAATCGGGTTTTGCTCTAATGTGCAGGAACGGTGCGTCCTTCATGCTGCTTGGTCTTCCCCAACAGGTTCAATTCAACTTACTTGTTTTTACGTGTTTTCTTTCGTCATTTTCTGTTTTTGGGTTTTATCGAATTTCGTTGTTTGGTGCTTGTTTTCCTCGGTAATGTGAAAACGTGGCCGAGAAATGCTGCACTCTTAAATTTCAATCTCTGTTTGTTTAACTAGGATCTCCAGAGGATAGTGGTTAATCTTCAAAGTTTTTCTGGATTCTTGAAACCATGGATCTGTTGAGTAGCTGACGCCATATTTGTTTCCCGTTCATTTAAAAAAAACGAATGTAAGTATCTAGATTGTGGTTTTCTGGGGACTTGGTAGGTTCAAGTAATTGGAGCTAGTTTCCGTGAGAAATATGGGCATAAAATTATAAATAGAAGTACTAAGCTGCAGACCTAGAATTCTCACTATTTGGAATCTTGACATCCTTCAGAACCAGTTCTAACCATTGAGAAGGATGTGGTAATAGGGGGTATGGATGTGATCATTTTGCTTCTCAAATTATCTCTAGGAATCCAAGCATTGTTATGCACTTTTCATATACGATGAACGTGAAGCATAACAAAGTCAGTATAGTTCTTATAGGAATAGTAAGTTTTAACCAGAACTTAGAAGTTAAGCGATCTTGTTCTTATATTTCTATCATGCAACCATCCATCTGCTACGATTATGGCCTTGGTCCACTTGTTTATTAGACTCTTTGTGTTCAACCACAATAATCCCATTTCATGATAATTTGATCTCACTCTAGACTGGTTCTTCTCATTTGGTTCAGTAACCTTAGTTCAACATATTACATTGTTTTCATCAACCTGTGTATTGCCGTTAGTTCTCTAGAAAACAACACCCCCAATTTATGATAAGATGATTTTGTTCCAATATCATCTATTCAAACTGCTTCCTTTGTAGAAGCAAAGTTCTCGCTCCTTTTTGTTTTTTTTTTCTTCCTTTTTATCCCCTCTTTTCTTTTCTTTTTTCTTTAAGTGAGCATAATTTAACGTTGTTTCCTTTCTTTTCCATTCTGGTAACCTCTTCTGGATTAGGATTTTGGAGTAAAGGGTTTCTCCATTGAATTCCTTTTTTCTCAATCTCTAGCCTGAATAATTAACATTTCTACCGCAAAATTACACTATCAACGTATTGTGTTGTACACTATTTCTTTGATTTTTCACTTCCCTTTTTTATCCTTCTTATTTGTTATATGTATGATCAAAAGTCGGAGAAGGAGGCTAGTTTTACATCAGGGATTTGCCAAATTTTCTTATTTTCTTGTCAGTTCCTTTCTAGGATCTTCATTTATATCTATGCATATGCATGATACTGTAAGGAGTTATATCATCATTTAGCAATTAGTTGATAGTGGTTGGAGATGGGGTAGATAGGGAAGGACAGAGAAGGAGTAAGAGATAAAGAGAGAGACAGAACAAGGTGGAGAGAGAGGGAATGGGAGAAGGAACAGGAGAGTTGGGTAATAGTGAGAAAGAGTGATGGATAGAGAGAGTAACAGAGAGAAGTACAATGGCGGCAGAACAGGAGAGTTGGGTAATGGAGAGGAAGAGTGATGGATGGAGATAATTAAAGAGGGAAGTACAATGGAGCAGAGAAGGCTATGGATAGAGAGATGTAAAACGGTAGATATAGAGCTGACCAATAGGATGGGCAATTGCACGAGCTGTAAAGTTACTTCTCCCGTACTCTTGCAGGTTAAGGGGGGTTTGGCCTACAATTTTTGGGGGTTTAAATTTGCTTAGGATTTGACATTGCCTTTTTCAGGACGGGGTGAATTGCACAAGTCTTCAAATATTTGCCTCTCTGTCTTGTTTTTAAGTCATTTTCTTGGTTTCAGTACGTCTGGATGTAAAAGCTGAAGTTCCAGTCTTGACTTATGACAACTGCTTAATAATCAGACCTAAATTTACTATGTTGGTGTCCATTATTCGTGTGATCAGTCCAAAATATGAAACTTCTGTTTAAAATGTATATTTTTTAATCTCTGTTTCTTTTTTTAAAAAATTAGTACATAATCTGAAGGAAATAGTTGAGAATTTGAGAATGTTCTAAATGAGAAAAATGAGAGGCTCAAGGCATCTAAATTGACCAAGTTTGATGGTCTACTCTTAGTTCATAATCGATAACCCCTCAGTTGTCAGTTTAGAGAAAATGTTGTCATCTATCTTACTGGAGATGAAAGGCCATTGGATATAAATGAACTTCAATTTGTAAGGCCTCCTAATCCTCCTTTTGTCTTCTTTATTTTCCTCATTCCTCATTGTATAATTCTCTTGTACTTTGAATTCTATTTAATAAAGAAGCTTGTCTCCTTTTCAAAAAAAGTATCTAAAATCTGCAATGCAGCTTAATTCCTCTTTTCAGTTTGTGACACATGTTTTCTAGTCCATGCTATATCTAAATTTTCCCTTATATGTCCATCCAGGACTGCCGGCAGAGACATCTGTAGAGAGATTCGTCACAATTGGTGCTTATTGTCTGTTGCGGTCCTGCACAATTGAGCCAGAATGCATTATCGGGCAGCATTCCATCCTCATGGAAGGTTCCCTGGTTGAGACCCACTCTATTCTTGAAGCTGGGTCCGTGGTTCCCCCAGGAAGAAGAATTCCCACTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGAACGTTGACCCATGAAGAGACACTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTAAGCAAGGATCATTTCTCAGAGTTCCTTCCTTACTCACAAGCATACTTGGAGGTTGAGAAGTTCAAGAAGTCTTTGGGTATAACCATATGATTCAGCCTGTCTTCTTATCTTTGCATTTTGTTTGTTGAAGAAAATAAAATATCTCCAAAAGATAAACCAGCTTTCAGATTCCTTCATTTGACGTTCGTTTTGCTGGCATCGAGTTAGGATCAAATGAATTTTCTTAGATTGTAAGGTTGATGTTTCTGTTATCACCTGGATTCCTCGTTCGTGGGTAGTTAAAATCCACCAATGACTTGTAATCTCCGGTTGTATGTTTTTCACTTAACATTTATATGTTTGTTCCCAATGATGCATCTGGGTTTTACATTTGCCATTTCCCAGGTACTATTCAAACTTGGTTAAGAACTGGCTCTGTAAATTTTTCAAGGAATGTCTGACCACACGACAACGCCTTCCCTTCCATTGTCTGCTTATACTAGTTTAGTTCGTGCTTGTACTTATATTCTCTTTGCTGCTTCTCTTGGGTTTTATGGTATCCAGCCATTAATTTATTTGAGTTGGAGGAATCCATGGGAGGCCTGCTTGTTATAGTGTGTGAATGAACTGTTTTTTAGTTATATATACAGATATATAAATGGTATCTTTTCTTGCCTCA ATGGCAGCTCTAGCTCGTTTCTCCCGCAAGGCTATTGCCTCAGCGGTTGCCACCAATCAACTCCGCCGTGCTTTCTCGACCCAAGTGTCCAAAACGATCACGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGACAGATAATCCCGCTCGGTCAGTGGCTCCCCACAATCGCCGTCGACGCCTATGTTGCACCTAATGTGGTTCTTGCCGGACAGGTTAAAGTCTGCGACGGGGCCTCTGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATTACAATCGGGTTTTGCTCTAATGTGCAGGAACGGTGCGTCCTTCATGCTGCTTGGTCTTCCCCAACAGGACTGCCGGCAGAGACATCTGTAGAGAGATTCGTCACAATTGGTGCTTATTGTCTGTTGCGGTCCTGCACAATTGAGCCAGAATGCATTATCGGGCAGCATTCCATCCTCATGGAAGGTTCCCTGGTTGAGACCCACTCTATTCTTGAAGCTGGGTCCGTGGTTCCCCCAGGAAGAAGAATTCCCACTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGAACGTTGACCCATGAAGAGACACTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTAAGCAAGGATCATTTCTCAGAGTTCCTTCCTTACTCACAAGCATACTTGGAGGTTGAGAAGTTCAAGAAGTCTTTGGGTATAACCATATGA ATGGCAGCTCTAGCTCGTTTCTCCCGCAAGGCTATTGCCTCAGCGGTTGCCACCAATCAACTCCGCCGTGCTTTCTCGACCCAAGTGTCCAAAACGATCACGCCCTCACCGGATCGAGTCAAGTGGGACTATAGAGGTCAAAGACAGATAATCCCGCTCGGTCAGTGGCTCCCCACAATCGCCGTCGACGCCTATGTTGCACCTAATGTGGTTCTTGCCGGACAGGTTAAAGTCTGCGACGGGGCCTCTGTTTGGGCGGGTTCCGTTCTCCGCGGCGATCTCAACAAGATTACAATCGGGTTTTGCTCTAATGTGCAGGAACGGTGCGTCCTTCATGCTGCTTGGTCTTCCCCAACAGGACTGCCGGCAGAGACATCTGTAGAGAGATTCGTCACAATTGGTGCTTATTGTCTGTTGCGGTCCTGCACAATTGAGCCAGAATGCATTATCGGGCAGCATTCCATCCTCATGGAAGGTTCCCTGGTTGAGACCCACTCTATTCTTGAAGCTGGGTCCGTGGTTCCCCCAGGAAGAAGAATTCCCACTGGTGAACTTTGGGCAGGAAACCCAGCAAGGTTTGTCAGAACGTTGACCCATGAAGAGACACTGGAAATTCCTAAACTTGCTGTTGCAATTAATGACCTAAGCAAGGATCATTTCTCAGAGTTCCTTCCTTACTCACAAGCATACTTGGAGGTTGAGAAGTTCAAGAAGTCTTTGGGTATAACCATATGA MAALARFSRKAIASAVATNQLRRAFSTQVSKTITPSPDRVKWDYRGQRQIIPLGQWLPTIAVDAYVAPNVVLAGQVKVCDGASVWAGSVLRGDLNKITIGFCSNVQERCVLHAAWSSPTGLPAETSVERFVTIGAYCLLRSCTIEPECIIGQHSILMEGSLVETHSILEAGSVVPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSKDHFSEFLPYSQAYLEVEKFKKSLGITI* Homology
BLAST of CsaV3_1G000460 vs. NCBI nr
Match: XP_011651037.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucumis sativus] >KGN63474.1 hypothetical protein Csa_013834 [Cucumis sativus]) HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. NCBI nr
Match: XP_008464419.1 (PREDICTED: gamma carbonic anhydrase-like 2, mitochondrial [Cucumis melo] >KAA0057763.1 gamma carbonic anhydrase-like 2 [Cucumis melo var. makuwa] >TYJ98444.1 gamma carbonic anhydrase-like 2 [Cucumis melo var. makuwa]) HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129 Identity = 236/244 (96.72%), Postives = 239/244 (97.95%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. NCBI nr
Match: XP_023531879.1 (gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468.4 bits (1204), Expect = 3.8e-128 Identity = 231/244 (94.67%), Postives = 238/244 (97.54%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. NCBI nr
Match: KAG7021390.1 (Gamma carbonic anhydrase-like 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 467.6 bits (1202), Expect = 6.5e-128 Identity = 231/244 (94.67%), Postives = 237/244 (97.13%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. NCBI nr
Match: KAG6587404.1 (Gamma carbonic anhydrase-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 467.2 bits (1201), Expect = 8.5e-128 Identity = 230/244 (94.26%), Postives = 237/244 (97.13%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy Swiss-Prot
Match: Q9SMN1 (Gamma carbonic anhydrase-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL2 PE=1 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-110 Identity = 195/253 (77.08%), Postives = 220/253 (86.96%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy Swiss-Prot
Match: Q9FMV1 (Gamma carbonic anhydrase-like 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACAL1 PE=1 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 5.0e-107 Identity = 193/253 (76.28%), Postives = 217/253 (85.77%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy Swiss-Prot
Match: Q94AU7 (Gamma carbonic anhydrase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA3 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 5.3e-32 Identity = 70/183 (38.25%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy Swiss-Prot
Match: Q9FWR5 (Gamma carbonic anhydrase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA1 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.1e-32 Identity = 71/183 (38.80%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy Swiss-Prot
Match: Q9C6B3 (Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GAMMACA2 PE=1 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.5e-31 Identity = 63/165 (38.18%), Postives = 106/165 (64.24%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy TrEMBL
Match: A0A0A0LR76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001460 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 5.9e-135 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy TrEMBL
Match: A0A5D3BH64 (Gamma carbonic anhydrase-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00450 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 7.5e-130 Identity = 236/244 (96.72%), Postives = 239/244 (97.95%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy TrEMBL
Match: A0A1S3CLK0 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502311 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 7.5e-130 Identity = 236/244 (96.72%), Postives = 239/244 (97.95%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy TrEMBL
Match: A0A6J1EZA5 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111440330 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 4.1e-128 Identity = 231/244 (94.67%), Postives = 237/244 (97.13%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. ExPASy TrEMBL
Match: A0A6J1JI10 (gamma carbonic anhydrase-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484776 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127 Identity = 228/244 (93.44%), Postives = 237/244 (97.13%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. TAIR 10
Match: AT3G48680.1 (gamma carbonic anhydrase-like 2 ) HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-111 Identity = 195/253 (77.08%), Postives = 220/253 (86.96%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. TAIR 10
Match: AT5G63510.1 (gamma carbonic anhydrase like 1 ) HSP 1 Score: 388.7 bits (997), Expect = 3.6e-108 Identity = 193/253 (76.28%), Postives = 217/253 (85.77%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. TAIR 10
Match: AT5G63510.2 (gamma carbonic anhydrase like 1 ) HSP 1 Score: 370.9 bits (951), Expect = 7.7e-103 Identity = 192/280 (68.57%), Postives = 216/280 (77.14%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. TAIR 10
Match: AT5G66510.1 (gamma carbonic anhydrase 3 ) HSP 1 Score: 139.4 bits (350), Expect = 3.8e-33 Identity = 70/183 (38.25%), Postives = 113/183 (61.75%), Query Frame = 0
BLAST of CsaV3_1G000460 vs. TAIR 10
Match: AT1G19580.1 (gamma carbonic anhydrase 1 ) HSP 1 Score: 138.7 bits (348), Expect = 6.5e-33 Identity = 71/183 (38.80%), Postives = 113/183 (61.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|