CsaV3_1G000330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G000330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Membrane-anchored ubiquitin-fold protein
Location	chr1: 202276 .. 206546 (+)
RNA-Seq Expression	CsaV3_1G000330
Synteny	CsaV3_1G000330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATCCCAATATTCTTCATTCTAAAAAGCCTGCAGCTGAGAGGAAACTGCTTTGGCCTGAATTGTGAATTGATCGTCGCCTTCTCAAGGTCTCTTCTCTCTTCTTAATTCTCCTCTTCTTTTGCACTTTATCCACAATTACTCTCCTTTTCGGATCTTTCATGGTGTTTCTTCACACCTGTAATTTCTTCAGCTTCCTTGCTGTTGGAATTGGTTTTGATTCCTTCTAGGGCACCGGATTTCGTCACCGCCTGTGTCCGATCAATTCAATCTCCGGATCCAACATTTCTACCTGATTTCAGGAGGATAGTCAACTCAGATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCGGCGTCCACAATTGATGTGCTTAAGCAGAGAATAGTCTCCGATTGGCCCAAAGGTTCTCAACTTTACTCTTCATCTTCTCTCTGATCTTTTCTGTTATAAGTATTCATTCAATTTGTAATCGTTTCTGACATTAGCCTTTTTTTTATCCTTTTTTTTTTTTTTTCTATACTGCAAACGCTTGTGTGAATTTTCGGCGTTTCTGCTGCATGTTCTGTACTCTGTCAATCCCTCTTTTTTTTAATACTATAGTCTGCTAGCTTAAGAGAGGTACTATTTTTAGGAATAATATTTTATTCTTGGCAGACGATTCCATGTCGTTTTGTTATTCTTGATTTACGCGCTCATTCAGATGGCGCGCATTGAATCTGTTGATGTATGTCGTTTTACAGTTAGGAAATCATGCCTTTGTTTTTGGTTTCTTAAAAATTGTCTTTTGTTCTCTGGACTTCCTATCATTTTTTCTTTCTCTGATTTCGTTTTCATATTGATTTCTGTTTCCCTTTTGGGACGATTTTTTTTTCCTTTTCAGGAAAAACAATCACTCCGAAGGCAGCCAGTGAAATAAAACTGATAAGCTCTGGAAAAATTTTGGAAAATAACAAAACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACCATAATGCACGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAAACAGGTGATTTCTTTTGAGATTTTTGCCATAAATATAATTGTATTAGTCATTGATTGTTCTTTTTTAAATTTTAATTTTACATGAAATTTTTTCCCCCTTTTCTCCAATCCCCGATGGTTTTTCAAATACTCTGGATTTAGTACGAGTCTATATAATTGTGGTCTTAGGAGATGGATTCGCATTCTGAACTGATACATTCACCAAATTGTTGTTGGTCTTTTAGCTTGTATCTGTCAATATTCTTCTAATGCTAATTCTTAATGCCCGCTTTTGTTACAATTTCTGGAGTTAATGGTATATAACAATTTTATAATTGTTATTCTGCTTTCAAAGCCTTTTGACTAGTGCTTTCGAGTTATAACTATGAACCATGCTAACCAGAATTCTGAATCTTAGCATGTAGTTCCATGAGTTAGCTATCATGAGCCTCGTAGAGAACCTTCTTTCTTCATTTATTTCTGCTCCAGAATTATATCTTCTTTTTTTATCTGTCCCTGAACTATGCCTGTAGCTTTTAAATGCAGAAGGGTTTTCTAGGCCTTCTTTGAATGGTTACGGTTAGGACAATAACTGCTAGCAGATTGTATCGAAACCACTTCATTTGGCACAAAGTTAGAGACATATGATCATCTTATTGACTAGTACTCCCTTAAAAAGTATGCAGTGAGAAGCTATCCACTGAGTTGGCTAGTGTGAATAATAAAGAGCTTAAAGAGAATAGATTCAAGTTATGCTATGGCCACCTACCTAGGATGTAAATCTTACAAATATCCTTGGTAATCAAATGTAGTAGTTTTATATAGTTTTGTAGTGAGAATGGTCAAGATGTCCACAAGATGGCCAGACATTCACGAATATATTAAAAAAAAAAATGAAGGTACATAGTTTCTAGGGGCTTGGCTGGACTATGAATCTGCAGATTTAACTAGTCAACTAGGAATTCTAATGGCAAAATTACTATATAGTACAGATTGTTGGATAAAGATCAAAGTTTGCTGTATATATTCGTGAACAGTACTCTTCTTTGTATTCTTCGGTTGAGGAATTTCTGCATAGGAACATTGGGGTTTGTTGGATGTCTTGCGTAACCCTTAGCTGAGGATTCAAGTATATTCGTTTAACCACTCTTTCTCTTTGCATGATTTTTCCCTCTTCTTCCCTCTTCTTCCCTCTTCTTCCCTCTTCATTATTTTTGTCTTCATTTTTTTCTTTTCATCTTCTAATCATTGGGAAATCTAAAATAAACTAGCAAAGGAAGTACTTGGATTGTTGTTAGGGCCAATAAAAATTTCAAATCATCCAGATTTATTTATTTATTTTATTTGTTTGAATTTACAGAAATTAATTGACTGCTGTAAACTACTATTAAAATCAGTGATATTATTATTAATTACTTGACAGAATTAATATATTAATTAGCCTCATTTAATCAACTGGCTATAATTGTCATTAATTGCTTATAATTAATTTGATTAATTCTAATATTTCGTGATTTCATGGGATTACTTGTGATTCTATAGAAACATCTTTTATTTTCATGAAACTTGACAATAAGTCTAACTTCCGTGAATTGCTTGGATTTAATTTTGCTTAATTATATCCACGAAACTTGTCGAAGTCTTTGTTCGAAATAAACATTTTTTAATTTCAAAATAAAGGGGCAGACAATGAAATTTTGAACTAAGGTGGCCCCTTCAATGTTTTTCTATTATTGGCAGTCTAGGATATCATCTATGAATCTGGTTTCTTCTGTTTGATCGTTGATTTTTCATTCTTGATTTCAATGAATTCATATACAAAGCAAGCACCTGCTGAAGAAAGAAGAGTGGGAGAGAAACAGAATGAAAAGTAGAATGTGTTAGTGTTGCTTTAAGTCAATTTACGTGACTGCTGTGTTTCTCTAATCCAATCTTGAATGTGGTCCAAATCCTCGTAGAACTGTTTTAAATCACAACTTAGTGAACTTGTGGTCATTGATTGAATTTGTTTTTGATTAGTCTGATATTTCTTTGCTGTGCCGTGAAATATTTATTTACATAGATATGTTGATGATAATTGATACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGAAACACAACACCAGTCATATGATTCGTTTGGTAAATCATCTTCCAAAACACGGTTGCTATCACCCATATTCTTGTGTATAAATGCTTTCTGGTAATTTGGTAATGATGTGTTTAGGAATATTGATGTGGGGGACATACTTTTCTTTTATATGATTGTGAAGTTTTTCTTATTATTTTTCAAATTCTTTGGTTACTAAGGACATGCTCTATTCTGTTTTTCCCATAAGCCTCTCTCTTTTGGTACAGGAAAAGCTAGATCTTCTCTCTTATTAAGAGGGTTCCCAACTACAAGAAGAGGGCTATTTATAGATTACGAGAGGCATTCAGTGATGAGGGTAATTTTGAAAAATTGCTAAAGAACATATCCCCATACTTTCTCC

mRNA sequence

ATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCGGCGTCCACAATTGATGTGCTTAAGCAGAGAATAGTCTCCGATTGGCCCAAAGGAAAAACAATCACTCCGAAGGCAGCCAGTGAAATAAAACTGATAAGCTCTGGAAAAATTTTGGAAAATAACAAAACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACCATAATGCACGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAAACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGA

Coding sequence (CDS)

ATGCCGGAGGACGATTTGATTGACATTAAGTTTAGGCTCTACGATGGTTCTGATATTGGACCCTTTCGATACTCGTCGGCGTCCACAATTGATGTGCTTAAGCAGAGAATAGTCTCCGATTGGCCCAAAGGAAAAACAATCACTCCGAAGGCAGCCAGTGAAATAAAACTGATAAGCTCTGGAAAAATTTTGGAAAATAACAAAACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACGGGAGGAGTCACCATAATGCACGTTGTTGTACAGCCATCCCTAGCGAAAGCTAAAACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTCTGCTCCTGTTCCATACTTTGA

Protein sequence

MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL*

Homology

[Close]

BLAST of CsaV3_1G000330 vs. NCBI nr
Match: XP_031745197.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745202.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN63460.1 hypothetical protein Csa_013839 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 8.2e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.0 bits (611), Expect = 1.1e-59
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. NCBI nr
Match: XP_022134657.1 (membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134659.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134660.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 1.5e-58
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT+KKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTDKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. NCBI nr
Match: XP_023516373.1 (membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023516374.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.3 bits (599), Expect = 2.6e-58
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDD IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDFIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGE TGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. NCBI nr
Match: XP_022988440.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988441.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988442.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 234.2 bits (596), Expect = 5.9e-58
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDD IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAA+E+KLISS
Sbjct: 1   MPEDDFIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAANEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGE TGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.1e-50
Identity = 88/118 (74.58%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +E+KLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPSLAK+KTEKK D + + ++C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-36
Identity = 71/120 (59.17%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS+IKLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQ--QKIVCSCSIL 119
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+ EKK +  +  Q+  CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32
Identity = 64/116 (55.17%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 4   DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGK 63
           D+ +++KFRL+DGSDIGP R ++ A+T+  LK R+V+DWPK KTI PK A+++KLIS GK
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGK 79

Query: 64  ILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           ILEN+K + QC+ PFG+       MHVVVQPS AK+K +KKT+   +   CSC+IL
Sbjct: 80  ILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 7   IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGKILEN 66
           I++KFRL+DG+DIGP +Y  ++T+  LK+ I++ WP+ K ITPK  +++KLI++G+ILEN
Sbjct: 8   IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILEN 67

Query: 67  NKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           N+T+ + ++P GE  GGV  MHVVV+P      +EK+  NS ++  C C+IL
Sbjct: 68  NRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.3e-27
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   ++KLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL
Match: A0A0A0LNH9 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001320 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.0e-60
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL
Match: A0A6J1IG02 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111472981 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.2e-60
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL
Match: A0A1S3CMX7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.2e-60
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL
Match: A0A6J1EXB1 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111439129 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.2e-60
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL
Match: A0A6J1C076 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111006877 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 7.5e-59
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT+KKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTDKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of CsaV3_1G000330 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein )

HSP 1 Score: 198.0 bits (502), Expect = 4.4e-51
Identity = 88/118 (74.58%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +E+KLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPSLAK+KTEKK D + + ++C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of CsaV3_1G000330 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor )

HSP 1 Score: 154.1 bits (388), Expect = 7.2e-38
Identity = 71/120 (59.17%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS+IKLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQ--QKIVCSCSIL 119
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+ EKK +  +  Q+  CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of CsaV3_1G000330 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   ++KLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of CsaV3_1G000330 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-28
Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   ++KLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of CsaV3_1G000330 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60
           M ++DLI++KFRL DG+DIGP +YS   T+  LK++I++ WPK K   PK  +E+KLI+ 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCK--LPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKT+ + +  +  GE  G VT MHVV++P L + K EK  ++  +K  C C IL
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120

The following BLAST results are available for this feature:

BLAST of CsaV3_1G000330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745197.1	8.2e-60	100.00	membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 mem...	[more]
XP_008464397.1	1.1e-59	99.15	PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_0084643...	[more]
XP_022134657.1	1.5e-58	96.61	membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134...	[more]
XP_023516373.1	2.6e-58	97.46	membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022988440.1	5.9e-58	96.61	membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >X...	[more]

BLAST of CsaV3_1G000330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW27	6.1e-50	74.58	Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9LSD8	1.0e-36	59.17	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q7XRU4	1.2e-32	55.17	Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6Z8K4	1.9e-27	47.32	Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8LCS8	4.3e-27	50.00	Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]

BLAST of CsaV3_1G000330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNH9	4.0e-60	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001...	[more]
A0A6J1IG02	5.2e-60	99.15	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A1S3CMX7	5.2e-60	99.15	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298...	[more]
A0A6J1EXB1	5.2e-60	99.15	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1C076	7.5e-59	96.61	Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CsaV3_1G000330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24990.1	4.4e-51	74.58	Ubiquitin family protein	[more]
AT3G26980.1	7.2e-38	59.17	membrane-anchored ubiquitin-fold protein 4 precursor	[more]
AT5G15460.1	3.0e-28	50.00	membrane-anchored ubiquitin-fold protein 2	[more]
AT5G15460.2	3.0e-28	50.00	membrane-anchored ubiquitin-fold protein 2	[more]
AT1G77870.1	1.2e-27	48.33	membrane-anchored ubiquitin-fold protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 6..116 e-value: 5.9E-41 score: 139.1
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..118 e-value: 2.5E-47 score: 157.7
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 2.5E-41 score: 141.8
None	No IPR available	PANTHER	PTHR13169:SF3	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3	coord: 1..118
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 6..93 e-value: 1.30019E-42 score: 133.273
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..118
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..75 score: 10.266311
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G000330.1	CsaV3_1G000330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding