CsaV3_1G000120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000120
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 108352 .. 108666 (-)
RNA-Seq ExpressionCsaV3_1G000120
SyntenyCsaV3_1G000120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCGTGATGTGGCAAATGACATCCTCCTCCTCAAGCTCCTATCATCTCTCAACTGTGTGAACCTCGGCCCACCCTTCGTACTCTTTGCTTCCTCGCCTGAAATTTTATCCACGCCTCCTTCTACGACTCAAACAATGCACTGTAGTCTCATTAAATTGGAGAAGAGCGATATTCACAAGAGCACCAGCACCAGCACCACATTCTTCAATAAAAATAAAAATGTCTTGCCAAGGACCAACTTCAATAGTCAATACACAATAACACCCTTTTTGTGTTCAATCTCTCTCTCGAGACCAGCGAAGGCCTTTTAA

mRNA sequence

ATGGAGCGTGATGTGGCAAATGACATCCTCCTCCTCAAGCTCCTATCATCTCTCAACTGTGTGAACCTCGGCCCACCCTTCGTACTCTTTGCTTCCTCGCCTGAAATTTTATCCACGCCTCCTTCTACGACTCAAACAATGCACTGTAGTCTCATTAAATTGGAGAAGAGCGATATTCACAAGAGCACCAGCACCAGCACCACATTCTTCAATAAAAATAAAAATGTCTTGCCAAGGACCAACTTCAATAGTCAATACACAATAACACCCTTTTTGTGTTCAATCTCTCTCTCGAGACCAGCGAAGGCCTTTTAA

Coding sequence (CDS)

ATGGAGCGTGATGTGGCAAATGACATCCTCCTCCTCAAGCTCCTATCATCTCTCAACTGTGTGAACCTCGGCCCACCCTTCGTACTCTTTGCTTCCTCGCCTGAAATTTTATCCACGCCTCCTTCTACGACTCAAACAATGCACTGTAGTCTCATTAAATTGGAGAAGAGCGATATTCACAAGAGCACCAGCACCAGCACCACATTCTTCAATAAAAATAAAAATGTCTTGCCAAGGACCAACTTCAATAGTCAATACACAATAACACCCTTTTTGTGTTCAATCTCTCTCTCGAGACCAGCGAAGGCCTTTTAA

Protein sequence

MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIHKSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF*
Homology
[Close]
BLAST of CsaV3_1G000120 vs. NCBI nr
Match: KGN63438.1 (hypothetical protein Csa_013767 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH 60
           MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH
Sbjct: 1   MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH 60

Query: 61  KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF 105
           KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF
Sbjct: 61  KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF 104

[Close]
BLAST of CsaV3_1G000120 vs. ExPASy TrEMBL
Match: A0A0A0LNQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000620 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH 60
           MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH
Sbjct: 1   MERDVANDILLLKLLSSLNCVNLGPPFVLFASSPEILSTPPSTTQTMHCSLIKLEKSDIH 60

Query: 61  KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF 105
           KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF
Sbjct: 61  KSTSTSTTFFNKNKNVLPRTNFNSQYTITPFLCSISLSRPAKAF 104

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63438.13.4e-49100.00hypothetical protein Csa_013767 [Cucumis sativus][more]
BLAST of CsaV3_1G000120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G000120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNQ91.6e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000620 PE=4 SV=1[more]
BLAST of CsaV3_1G000120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000120.1CsaV3_1G000120.1mRNA