CsGy7G021680 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G021680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Mannose-6-phosphate isomerase
Location	Gy14Chr7: 23700459 .. 23701258 (+)
RNA-Seq Expression	CsGy7G021680
Synteny	CsGy7G021680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCAAAGCCTTAGGTTTGTGCAGTAGCAAATATTAATGGGCTGCTGCTGTTGCTGCTGCTGCTGCAAAGTTTCTAGCTTTTCATCTTTGGCTTATAATTATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGTCAGTCATCAACCCATTACAATAACAAAACGAACCCAAACCCTTATTTGTCCTAGCTTATTTTAATATTTTTTTTCTTTTTTCTTTTTTGGGTTTTGGTTTTTTCAGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATGTATGTGTTTCTCTTACCAACGATATATCTAATCTAATTGAAATATTATTGTTTTCTTATTTATGGTACGTAGGGTTTGGAAATGTTGAAATTATTTTTGTAATGTTGGAGAGCATTAGTCATATATATGTGGTTTTACGTTTTTAGATATGATTTTCTTAGAAGATAAAGATATATGGATACATACAATGTTAATAGAAATATAGTAATCGTTTAATTTGAATGTGTATAATTAATTTTGTGTGTTATTGAGAGGTTAGATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

mRNA sequence

AGCAAAGCCTTAGGTTTGTGCAGTAGCAAATATTAATGGGCTGCTGCTGTTGCTGCTGCTGCTGCAAAGTTTCTAGCTTTTCATCTTTGGCTTATAATTATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

Coding sequence (CDS)

ATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

Protein sequence

MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFERRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF*

Homology

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_011659685.2 (uncharacterized protein LOC105436221 [Cucumis sativus] >KAE8646536.1 hypothetical protein Csa_016737 [Cucumis sativus])

HSP 1 Score: 225 bits (574), Expect = 2.66e-74
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60

Query: 61  RRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
           RRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF
Sbjct: 61  RRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_008462443.1 (PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo])

HSP 1 Score: 184 bits (467), Expect = 5.94e-58
Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLIDMVERL+PMK MFE
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDMVERLKPMKYMFE 60

Query: 61  RRGGGGGGGGGGS--LREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
           R G GGG     S  L EFEEERKRCQCSYVSTDQSPNKVL+LLKEPLSAPF
Sbjct: 61  RGGVGGGESESESESLGEFEEERKRCQCSYVSTDQSPNKVLQLLKEPLSAPF 112

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_038898732.1 (uncharacterized protein LOC120086256 [Benincasa hispida])

HSP 1 Score: 135 bits (340), Expect = 1.33e-38
Identity = 77/114 (67.54%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLID+VER + M  M E
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDIVERFKTMNYMLE 60

Query: 61  RRGGGGGG----GGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
             G             SL + +EER RCQC YVST+ SPN+ L+L+KEPLSAPF
Sbjct: 61  GEGDSQPSLPPPPSLPSLGDIKEERGRCQCFYVSTE-SPNQ-LQLVKEPLSAPF 112

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_023521779.1 (uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181.1 uncharacterized protein LOC111807614 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 128 bits (322), Expect = 9.31e-36
Identity = 72/122 (59.02%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TLNQGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  M E
Sbjct: 1   MAKPNARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHMIE 60

Query: 61  RR------------GGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSA 110
           R                 G      + +++EER RCQCSY+S + SPN+ L+LLKEPLSA
Sbjct: 61  RGELPLLPPLSSPLSSAAGPPAPPFVGDYKEERGRCQCSYISIE-SPNQ-LQLLKEPLSA 120

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_022992446.1 (uncharacterized protein LOC111488747 [Cucurbita maxima])

HSP 1 Score: 124 bits (311), Expect = 4.65e-34
Identity = 72/133 (54.14%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TLNQGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  + E
Sbjct: 1   MAKPNARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIE 60

Query: 61  RRGGGGGGGGGGSLR-----------------------EFEEERKRCQCSYVSTDQSPNK 110
                    GGG L                        +++EER RCQCSY+  + SPN+
Sbjct: 61  ---------GGGELPLLPPLSSPLSSATGPPPPPPLVGDYKEERGRCQCSYICIE-SPNQ 120

[Close]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL
Match: A0A0A0K9S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.97e-68
Identity = 105/110 (95.45%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF 
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF- 60

Query: 61  RRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
               GGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF
Sbjct: 61  ----GGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 105

[Close]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL
Match: A0A1S3CH00 (uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=4 SV=1)

HSP 1 Score: 184 bits (467), Expect = 2.88e-58
Identity = 96/112 (85.71%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLIDMVERL+PMK MFE
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDMVERLKPMKYMFE 60

Query: 61  RRGGGGGGGGGGS--LREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
           R G GGG     S  L EFEEERKRCQCSYVSTDQSPNKVL+LLKEPLSAPF
Sbjct: 61  RGGVGGGESESESESLGEFEEERKRCQCSYVSTDQSPNKVLQLLKEPLSAPF 112

[Close]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL
Match: A0A6J1JTK7 (uncharacterized protein LOC111488747 OS=Cucurbita maxima OX=3661 GN=LOC111488747 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 2.25e-34
Identity = 72/133 (54.14%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TLNQGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  + E
Sbjct: 1   MAKPNARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIE 60

Query: 61  RRGGGGGGGGGGSLR-----------------------EFEEERKRCQCSYVSTDQSPNK 110
                    GGG L                        +++EER RCQCSY+  + SPN+
Sbjct: 61  ---------GGGELPLLPPLSSPLSSATGPPPPPPLVGDYKEERGRCQCSYICIE-SPNQ 120

[Close]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL
Match: A0A6J1GPS6 (uncharacterized protein LOC111456424 OS=Cucurbita moschata OX=3662 GN=LOC111456424 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.07e-32
Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TL QGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  + E
Sbjct: 1   MAKPNARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIE 60

Query: 61  R-------------RGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLS 110
           R                  G      + ++ EE  RCQCSY+  + SPN+ L+LLKEPLS
Sbjct: 61  RGELPLLPPLSSPLSSAAAGPPPPPFVGDYNEESGRCQCSYICIE-SPNQ-LQLLKEPLS 120

[Close]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL
Match: A0A6J1DD75 (uncharacterized protein LOC111019960 OS=Momordica charantia OX=3673 GN=LOC111019960 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.12e-30
Identity = 63/110 (57.27%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAK  +CCSIELEPKTLN GQL++AREVAADVVQKLE  EA+ V ID+VER + +    E
Sbjct: 1   MAKAKICCSIELEPKTLNHGQLYRAREVAADVVQKLEPEEASAVXIDVVERFKTVNQTIE 60

Query: 61  RRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF 110
                  G     L+++ E R+RCQCS + T+ SPN++ +LLKEPLSAPF
Sbjct: 61  S------GEPSRPLQDYVEGRERCQCSCLPTE-SPNQM-QLLKEPLSAPF 102

The following BLAST results are available for this feature:

BLAST of CsGy7G021680 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G021680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659685.2	2.66e-74	100.00	uncharacterized protein LOC105436221 [Cucumis sativus] >KAE8646536.1 hypothetica...	[more]
XP_008462443.1	5.94e-58	85.71	PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo]	[more]
XP_038898732.1	1.33e-38	67.54	uncharacterized protein LOC120086256 [Benincasa hispida]	[more]
XP_023521779.1	9.31e-36	59.02	uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181....	[more]
XP_022992446.1	4.65e-34	54.14	uncharacterized protein LOC111488747 [Cucurbita maxima]	[more]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9S8	1.97e-68	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1	[more]
A0A1S3CH00	2.88e-58	85.71	uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=...	[more]
A0A6J1JTK7	2.25e-34	54.14	uncharacterized protein LOC111488747 OS=Cucurbita maxima OX=3661 GN=LOC111488747...	[more]
A0A6J1GPS6	2.07e-32	55.28	uncharacterized protein LOC111456424 OS=Cucurbita moschata OX=3662 GN=LOC1114564...	[more]
A0A6J1DD75	1.12e-30	57.27	uncharacterized protein LOC111019960 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of CsGy7G021680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34808:SF5	SUBFAMILY NOT NAMED	coord: 1..110
None	No IPR available	PANTHER	PTHR34808	EXPRESSED PROTEIN	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G021680.1	CsGy7G021680.1	mRNA