CsGy7G020965 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G020965
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	mitochondrial import inner membrane translocase subunit TIM23-2-like
Location	Gy14Chr7: 23243901 .. 23246515 (+)
RNA-Seq Expression	CsGy7G020965
Synteny	CsGy7G020965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGGCTATGTACTGAACCGAGAATCGGCGCGATTCTTTTCCCGCATAAAATAGTGAGAATCGCATTTCTTAAGAATCTCTCTCTCCGCTTCAATTCTTTCTCTCTCTTGGAGAGAATTGAGCGTAACCCTAAGCTTAGAACTCAAATCAACCATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTATGTGCCGATATGATGTGGGGAAAAGGAATGTTTTTTTTTTTTGCAATTTTGATCGATATACTTCGTTTTAGGGAGTCATAGTTTTATATGTGAAACTGTGATGAGAATGCTGAGGATTGAATTAACTAATTCACTTGATATTTTCTATACGAGTTTAACTCGTGCTTCTTCTTTGAGTGATGTAATTCGTCGAGTTCTCTGATAATGAATAATCTTCAAGAATTTAGACTTGTGGTATGGGAATGATCAAATTATTTCCATTACTTCTGATGATTTGGTTGTAAGTAATGAGATTGTTTGAGGTTTGTTCGTTGTCGTATCTCATCAATTAGTAACTTATTGTTTGGCTGCTTCAATATATAATTTTCAAGTTTTTGAGAACAGAACACAGATCCACGTTTGATGCTTTCATGGCTTGATGGAGTACACAAGATTTGTGATTCCGTGGTCAATGCTTGTCGATAATGGTGAATTTTGTAGAAAATTATAATGCCCCTTTTGAGCTTAGGTATTCGGATAGTCTTATACGCCCTGTATGAGCAAATGAATTCAACTTTAATCTCTTATCTGTTCACATTCTAATGGTGTTAATATGTGAGACTATTCAAGGTTGTAACTTTTACCTAGCCAAATCGCTGGTCATCCTTGATTCACCCGTTCCAATCCTTTTGTTGTAGAGAACTTTTACCTTGCTTATTCTTGACCATTGTTTGATCATTAAACCAAAGCTCTTCAAATGAAATATGTTTTGTTCTTCCAAGTTAACTTGAAATCTTTGATCGGAATTTAGTTCATCTTTGCAAAAGTTAGGCATGTTTTTTGATTTCAATGAGAGGTGGTGGTATTTTGAGCAGGGTCGTTTTGAATGATTATGGTATCTCTTGAGTGTGTTGCTAGTAGTTGGTTTAGTTACAAATGAAATGGTGTCTCTGCAGAGTATAGAGTCTTGTGCTATCTTGATTTCTATTACAATAAAAGTCTTGGTAAATGCCCCTTCAAAAATGATATTGCACATTGATTGAACTCGGAAAATTGCCAAATAGGAAAAGTATGCTTTAAAGCTCTCCGTACGCTACCCTTGATTCTTTCAGCACTTGGTGCATCAACATCATGATCCTCGCAGGTGCATTGCTTTTATCGTTTCTCGTAGATATTTTACATCAAGTTTAACTGTTTTTCGTTTTAGCAACATTAACAGTTACAGGCAGTAAATGAACTGGCAGGTCCTCCCGAATTCCTACTCCACAAATGTTCTCATTGAGGCACATTCTTTGTCTTCATCAACCTGGTGGGATATTCTTCTTTATCATCCCAAGTGAAGCTATAGAAATGATTGTCATTGTAACAAAAATTTCATTGGATTTGACTGGATTTTGACATATGAACTACAGACAGTTTGGTAGCAAGTTGAGTAGAGGCATTCAATGTGACAAAAGGCAAAATCAACTGTTTGCTGAGGTATGTAAAAGGTTTCAATGAGATGTAATAGCTTCTCCTCTGTTCATAAAGCTCCATTTAAATCATTTGAAGTTGAAGCTATTCCTTTCCATCGACCTTTTAATCAATCTTACAAGATGGTTGATTAAAAAAGAAAATAATGATATTTTATATCAGAAAGCACCCACCTGAATTTTGAACACAGAAGAACCTTTGTAAGTTTTTAAGTATGTTCTGTTCTACCACTTTTTTAATTTATGAACTTTCAAGTTTACTCTATTGTAAACTTTCAAAATGTCCAAAACGTCCATAGTAATTCTTGTATTTTAGAGGTTGTTCCATTTTAGTCTTTACTTCTGTTCTAGTTTTAACGGATTAATGACAAAGCTTTGATTATGCATACTAACATATTTTGTTTCTTGCACTACAACGTTTGGTTGTCAAAGAAATTTATAGAAAATTAAT

mRNA sequence

CCGGGCTATGTACTGAACCGAGAATCGGCGCGATTCTTTTCCCGCATAAAATAGTGAGAATCGCATTTCTTAAGAATCTCTCTCTCCGCTTCAATTCTTTCTCTCTCTTGGAGAGAATTGAGCGTAACCCTAAGCTTAGAACTCAAATCAACCATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGAAAAGTATGCTTTAAAGCTCTCCGTACGCTACCCTTGATTCTTTCAGCACTTGGTGCATCAACATCATGATCCTCGCAGTAAATGAACTGGCAGGTCCTCCCGAATTCCTACTCCACAAATGTTCTCATTGAGGCACATTCTTTGTCTTCATCAACCTGACAGTTTGGTAGCAAGTTGAGTAGAGGCATTCAATGTGACAAAAGGCAAAATCAACTGTTTGCTGAGGTATGTAAAAGGTTTCAATGAGATGTAATAGCTTCTCCTCTGTTCATAAAGCTCCATTTAAATCATTTGAAGTTGAAGCTATTCCTTTCCATCGACCTTTTAATCAATCTTACAAGATGGTTGATTAAAAAAGAAAATAATGATATTTTATATCAGAAAGCACCCACCTGAATTTTGAACACAGAAGAACCTTTGTAAGTTTTTAAGTATGTTCTGTTCTACCACTTTTTTAATTTATGAACTTTCAAGTTTACTCTATTGTAAACTTTCAAAATGTCCAAAACGTCCATAGTAATTCTTGTATTTTAGAGGTTGTTCCATTTTAGTCTTTACTTCTGTTCTAGTTTTAACGGATTAATGACAAAGCTTTGATTATGCATACTAACATATTTTGTTTCTTGCACTACAACGTTTGGTTGTCAAAGAAATTTATAGAAAATTAAT

Coding sequence (CDS)

ATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGAAAAGTATGCTTTAA

Protein sequence

MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKRKSML*

Homology

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BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot
Match: Q9LNQ1 (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.7e-63
Identity = 121/183 (66.12%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 7   NRDTDSEFDHSSSQPRLYNPYKDLQVPYRN---FQLPTSPEFLFDEEARRQRRSWGENLT 66
           NR +D E D ++   RLY+PY++ QVP ++   ++LPTSPEFLF EE+ +QRRSWGENLT
Sbjct: 4   NRSSDHESDENT---RLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLT 63

Query: 67  FYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLL 126
           FYTG GYLAG+V GAS G+ SG+KSFE+GDT KL+INRILNSSG +GR WGNR+G++GL+
Sbjct: 64  FYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLI 123

Query: 127 YAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQM 186
           YAG+ESG+ AV D DDVW  V AGLGTGA++RAARGVRSAAVAGA GG+  G  V GKQ+
Sbjct: 124 YAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQV 183

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BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot
Match: Q38820 (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 8.6e-62
Identity = 121/177 (68.36%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 15  DHSSSQ-PRLYNPYKDLQVPYRN----FQLPTSPEFLFDEEARRQRRSWGENLTFYTGCG 74
           DH S +  RLYNPY++ +VP       ++LPTSPEFLF EEA RQRRSWGENLTFYTG  
Sbjct: 8   DHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTA 67

Query: 75  YLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLES 134
           YL G+V GAS G+++GVKSFESGDT KL+INRILNSSG +GR WGNR+G+IGL+YAG+ES
Sbjct: 68  YLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIES 127

Query: 135 GIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKR 187
           GI A  D DDVW  V AGLGTGA+ RAARGVRSAAVAGA+GG+  G  V GKQ++KR
Sbjct: 128 GIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

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BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot
Match: Q9S837 (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.8e-43
Identity = 92/167 (55.09%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 22  RLYNPYKDLQVPYRN-FQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGAST 81
           R YNPY+ + +PYR  ++LPTSPEFLF+EEA ++R +WGENLTF+TG GY  G+V GA  
Sbjct: 18  RQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFK 77

Query: 82  GLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDD- 141
           G ++G+++ E G+++K+R NRILNS G   R  GN LG +GL++A +ESG+  +RD DD 
Sbjct: 78  GTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDG 137

Query: 142 VWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKR 187
               V AGL TG LYRAA G RSA VAGAVGGV    AV G++++KR
Sbjct: 138 SLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

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BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot
Match: Q9USM7 (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.9e-13
Identity = 57/177 (32.20%), Postives = 84/177 (47.46%), Query Frame = 0


Query: 12  SEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSP-EFLFDEEARRQRRSWGENLTFYTGCGY 71
           SEFD     P   +P  DL  P     +       L  +      R W ++L + TG  Y
Sbjct: 37  SEFD-----PAKLHPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSY 96

Query: 72  LAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESG 131
           L+G   G   GL  G+K  +   + +LR+N ILN     G   GN LGV+ L+Y G+ S 
Sbjct: 97  LSGLAIGGLWGLNEGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSL 156

Query: 132 IEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKRK 188
           I   R      N VAAG  TGALY++ RG+R+ A++ ++     G+    K+   ++
Sbjct: 157 IGYKRQKHGWENSVAAGALTGALYKSTRGLRAMAISSSLVATAAGIWTLAKRSFTKR 208

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BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot
Match: A4IFL0 (Mitochondrial import inner membrane translocase subunit Tim23 OS=Bos taurus OX=9913 GN=TIMM23 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.0e-11
Identity = 55/150 (36.67%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 33  PYRN----FQLPTSPEFLFDEEARRQRRSWGENLTFYT--GCGYLAGAVGGASTGLVSGV 92
           PY N    + +  + EF+    A + R  +   L F+T  GC  + GA  GA  GL  G+
Sbjct: 44  PYLNVDPRYLVQDTDEFILPTGANKTRGRF--ELAFFTIGGC-CMTGAAFGAMNGLRLGL 103

Query: 93  KSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAA 152
           K  ++    K R  +ILN     G LW N LG + LLY+     IE  R  +D  N VAA
Sbjct: 104 KETQNMAWSKPRNVQILNMVTRQGALWANTLGSLALLYSAFGVIIEKTRGAEDDLNTVAA 163

Query: 153 GLGTGALYRAARGVRSAAVAGAVGGVVVGL 177
           G  TG LY+   G+R AA  G  G  + GL
Sbjct: 164 GTMTGMLYKCTGGLRGAARGGLAGLTLTGL 190

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BLAST of CsGy7G020965 vs. NCBI nr
Match: XP_004141690.1 (mitochondrial import inner membrane translocase subunit TIM23-1 [Cucumis sativus] >XP_008462339.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1-like [Cucumis melo] >KAA0059418.1 mitochondrial import inner membrane translocase subunit TIM23-1 [Cucumis melo var. makuwa] >KAE8646509.1 hypothetical protein Csa_016542 [Cucumis sativus] >TYK03908.1 mitochondrial import inner membrane translocase subunit TIM23-1 [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 4.72e-127
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG
Sbjct: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

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BLAST of CsGy7G020965 vs. NCBI nr
Match: XP_022953829.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_022953830.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023548834.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo] >XP_023548835.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355 bits (912), Expect = 3.06e-123
Identity = 180/186 (96.77%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA HSSNRDTDS FDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADHSSNRDTDSGFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTG VSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESG EAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

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BLAST of CsGy7G020965 vs. NCBI nr
Match: KAG6575462.1 (Mitochondrial import inner membrane translocase subunit TIM23-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014007.1 Mitochondrial import inner membrane translocase subunit TIM23-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354 bits (908), Expect = 1.24e-122
Identity = 179/186 (96.24%), Postives = 181/186 (97.31%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA HSSNRDTDS FDH SSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADHSSNRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTG VSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESG EAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. NCBI nr
Match: XP_038896585.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Benincasa hispida])

HSP 1 Score: 351 bits (900), Expect = 2.06e-121
Identity = 178/186 (95.70%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA  SSNRD+DS FDH SSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADRSSNRDSDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDT+KLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTLKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. NCBI nr
Match: XP_022992412.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima])

HSP 1 Score: 347 bits (890), Expect = 6.90e-120
Identity = 176/186 (94.62%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA HSS RDTDS FDH SSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADHSSKRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAV GASTG VSGVKSFESGDTMKLRINRILNSSGH GRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVAGASTGFVSGVKSFESGDTMKLRINRILNSSGHLGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESG EAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL
Match: A0A0A0K7V6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450700 PE=4 SV=1)

HSP 1 Score: 372 bits (956), Expect = 2.89e-130
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG
Sbjct: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180

Query: 181 KQMLKRKSML 190
           KQMLKRKSML
Sbjct: 181 KQMLKRKSML 190

[Close]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL
Match: A0A5D3BY19 (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001040 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 2.28e-127
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG
Sbjct: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL
Match: A0A1S3CGP4 (mitochondrial import inner membrane translocase subunit TIM23-1-like OS=Cucumis melo OX=3656 GN=LOC103500713 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 2.28e-127
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG
Sbjct: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL
Match: A0A6J1GQS1 (mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbita moschata OX=3662 GN=LOC111456245 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 1.48e-123
Identity = 180/186 (96.77%), Postives = 182/186 (97.85%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA HSSNRDTDS FDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADHSSNRDTDSGFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAVGGASTG VSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVGGASTGFVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESG EAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL
Match: A0A6J1JPR4 (mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbita maxima OX=3661 GN=LOC111488726 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 3.34e-120
Identity = 176/186 (94.62%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60
           MA HSS RDTDS FDH SSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE
Sbjct: 1   MADHSSKRDTDSGFDHGSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGE 60

Query: 61  NLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVI 120
           NLTFYTGCGYLAGAV GASTG VSGVKSFESGDTMKLRINRILNSSGH GRLWGNRLGVI
Sbjct: 61  NLTFYTGCGYLAGAVAGASTGFVSGVKSFESGDTMKLRINRILNSSGHLGRLWGNRLGVI 120

Query: 121 GLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTG 180
           GLLYAGLESG EAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGA+GGVVVG+AVTG
Sbjct: 121 GLLYAGLESGFEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAIGGVVVGMAVTG 180

Query: 181 KQMLKR 186
           KQMLKR
Sbjct: 181 KQMLKR 186

[Close]

BLAST of CsGy7G020965 vs. TAIR 10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23 )

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-64
Identity = 121/183 (66.12%), Postives = 149/183 (81.42%), Query Frame = 0


Query: 7   NRDTDSEFDHSSSQPRLYNPYKDLQVPYRN---FQLPTSPEFLFDEEARRQRRSWGENLT 66
           NR +D E D ++   RLY+PY++ QVP ++   ++LPTSPEFLF EE+ +QRRSWGENLT
Sbjct: 4   NRSSDHESDENT---RLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLT 63

Query: 67  FYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLL 126
           FYTG GYLAG+V GAS G+ SG+KSFE+GDT KL+INRILNSSG +GR WGNR+G++GL+
Sbjct: 64  FYTGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLI 123

Query: 127 YAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQM 186
           YAG+ESG+ AV D DDVW  V AGLGTGA++RAARGVRSAAVAGA GG+  G  V GKQ+
Sbjct: 124 YAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQV 183

[Close]

BLAST of CsGy7G020965 vs. TAIR 10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2 )

HSP 1 Score: 238.0 bits (606), Expect = 6.1e-63
Identity = 121/177 (68.36%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 15  DHSSSQ-PRLYNPYKDLQVPYRN----FQLPTSPEFLFDEEARRQRRSWGENLTFYTGCG 74
           DH S +  RLYNPY++ +VP       ++LPTSPEFLF EEA RQRRSWGENLTFYTG  
Sbjct: 8   DHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTA 67

Query: 75  YLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLES 134
           YL G+V GAS G+++GVKSFESGDT KL+INRILNSSG +GR WGNR+G+IGL+YAG+ES
Sbjct: 68  YLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIES 127

Query: 135 GIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKR 187
           GI A  D DDVW  V AGLGTGA+ RAARGVRSAAVAGA+GG+  G  V GKQ++KR
Sbjct: 128 GIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

[Close]

BLAST of CsGy7G020965 vs. TAIR 10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3 )

HSP 1 Score: 175.3 bits (443), Expect = 4.9e-44
Identity = 92/167 (55.09%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 22  RLYNPYKDLQVPYRN-FQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGAST 81
           R YNPY+ + +PYR  ++LPTSPEFLF+EEA ++R +WGENLTF+TG GY  G+V GA  
Sbjct: 18  RQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTGWGYCTGSVLGAFK 77

Query: 82  GLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDD- 141
           G ++G+++ E G+++K+R NRILNS G   R  GN LG +GL++A +ESG+  +RD DD 
Sbjct: 78  GTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAMESGVTYMRDGDDG 137

Query: 142 VWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKR 187
               V AGL TG LYRAA G RSA VAGAVGGV    AV G++++KR
Sbjct: 138 SLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

The following BLAST results are available for this feature:

BLAST of CsGy7G020965 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNQ1	2.7e-63	66.12	Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis t...	[more]
Q38820	8.6e-62	68.36	Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis t...	[more]
Q9S837	6.8e-43	55.09	Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis t...	[more]
Q9USM7	1.9e-13	32.20	Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharom...	[more]
A4IFL0	4.0e-11	36.67	Mitochondrial import inner membrane translocase subunit Tim23 OS=Bos taurus OX=9...	[more]

BLAST of CsGy7G020965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141690.1	4.72e-127	100.00	mitochondrial import inner membrane translocase subunit TIM23-1 [Cucumis sativus...	[more]
XP_022953829.1	3.06e-123	96.77	mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ...	[more]
KAG6575462.1	1.24e-122	96.24	Mitochondrial import inner membrane translocase subunit TIM23-1, partial [Cucurb...	[more]
XP_038896585.1	2.06e-121	95.70	mitochondrial import inner membrane translocase subunit TIM23-2-like [Benincasa ...	[more]
XP_022992412.1	6.90e-120	94.62	mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ...	[more]

BLAST of CsGy7G020965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7V6	2.89e-130	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450700 PE=4 SV=1	[more]
A0A5D3BY19	2.28e-127	100.00	Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Cucumis melo ...	[more]
A0A1S3CGP4	2.28e-127	100.00	mitochondrial import inner membrane translocase subunit TIM23-1-like OS=Cucumis ...	[more]
A0A6J1GQS1	1.48e-123	96.77	mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbit...	[more]
A0A6J1JPR4	3.34e-120	94.62	mitochondrial import inner membrane translocase subunit TIM23-2-like OS=Cucurbit...	[more]

BLAST of CsGy7G020965 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17530.1	1.9e-64	66.12	translocase of inner mitochondrial membrane 23	[more]
AT1G72750.1	6.1e-63	68.36	translocase inner membrane subunit 23-2	[more]
AT3G04800.1	4.9e-44	55.09	translocase inner membrane subunit 23-3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 64..173 e-value: 1.7E-24 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 15..187
None	No IPR available	PANTHER	PTHR15371:SF25	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE	coord: 15..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G020965.1	CsGy7G020965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005744	TIM23 mitochondrial import inner membrane translocase complex
molecular_function	GO:0008320	protein transmembrane transporter activity