CsGy7G019710 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G019710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 22306111 .. 22307108 (+)
RNA-Seq Expression	CsGy7G019710
Synteny	CsGy7G019710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATTGAAGAATTCTGGGTAAAACATTTAAAGGTAAAATCATGATGGAAGCAAGGATTTGCTTGCTACCAATAACCTCGAATCCTTGGAAGCATGAAACTGTGAAGTAAAAGCAATAACCTTCGCCAATAAAAAGACCTTACTCCTGAACAAAGGAAGGATTGAGGCTGGGCAAGCTGCCTTTTTCATCTTCCATTTCCAAATTTAAAAGGAAAAAAAAAAAAAAAAAATCAAGGCACCAGTGCATTAAAATGCTCGTAGGTCGTTCGAGTCTTGACTAATAGTCTTGAAAGGACTTCTTCAGCTTACACTTACTCTTCTACATCCAAACTGGCAAATTAAGTCTAATTGTAAAGGATTTTATGCTTCAAAAGTTTCAAATGTTGAGTCCCACTTTGAGGTTCTTATCAAAATTTCTTTAGGAGAAAAGACGTTTATTTTTAAGTAATGCACACCTAATTTGTGGATTTGACGTAGCTTTTGACATTTTGCCCATTCCATTCACGGTGGGGATGGGAAGTTCAAATAAAATTATTAATGGATGCCCTCACGTGAAAGCCTACTCTATTCGTTAGTCATTTTAGTTAATGGTTGCTTTGATGCAACTATCTGCACCTTAATTCGTCGTGGAGAATTCTCTTTTGTAGTCAGCTAAGTTGCTTGGCAAGATAGTGGTTGAAAGGCCCGTATTATGCTCAGAACTACGGTTTGAAATTTACCGGATTTTCTCGACAGGTGAATCTGGCCAATATTCAAAAGAGGGAAGAGGAAAAGGTGAGAACTTAAACTTTAAAGCTTAACTTGTCTCATAGCTTTTCTTCTGGTCCATCAGTTGGGTCGGATCGAAGATTGCTATGAACCATAGTATTGAGTTTGATGTTATGCAGGCGTTCAGGGAGCTTAGAGCAAAGGCCCAACTGAAGAGAACCTTTGGAAAAGTGGGTAGAAATGAGAGTTCCCTACACAATATACGTAGATTACTTGTGCTGAAATGA

mRNA sequence

ATGAGAATTGAAGAATTCTGGTGGTTGAAAGGCCCGTATTATGCTCAGAACTACGGTTTGAAATTTACCGGATTTTCTCGACAGGTGAATCTGGCCAATATTCAAAAGAGGGAAGAGGAAAAGGCGTTCAGGGAGCTTAGAGCAAAGGCCCAACTGAAGAGAACCTTTGGAAAAGTGGGTAGAAATGAGAGTTCCCTACACAATATACGTAGATTACTTGTGCTGAAATGA

Coding sequence (CDS)

ATGAGAATTGAAGAATTCTGGTGGTTGAAAGGCCCGTATTATGCTCAGAACTACGGTTTGAAATTTACCGGATTTTCTCGACAGGTGAATCTGGCCAATATTCAAAAGAGGGAAGAGGAAAAGGCGTTCAGGGAGCTTAGAGCAAAGGCCCAACTGAAGAGAACCTTTGGAAAAGTGGGTAGAAATGAGAGTTCCCTACACAATATACGTAGATTACTTGTGCTGAAATGA

Protein sequence

MRIEEFWWLKGPYYAQNYGLKFTGFSRQVNLANIQKREEEKAFRELRAKAQLKRTFGKVGRNESSLHNIRRLLVLK*

Homology

[Close]

BLAST of CsGy7G019710 vs. NCBI nr
Match: KAE8646468.1 (hypothetical protein Csa_015619 [Cucumis sativus])

HSP 1 Score: 135 bits (341), Expect = 1.01e-38
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 8   WLKGPYYAQNYGLKFTGFSRQVNLANIQKREEEKAFRELRAKAQLKRTFGKVGRNESSLH 67
           WLKGPYYAQNYGLKFTGFSRQVNLANIQKREEEKAFRELRAKAQLKRTFGKVGRNESSLH
Sbjct: 92  WLKGPYYAQNYGLKFTGFSRQVNLANIQKREEEKAFRELRAKAQLKRTFGKVGRNESSLH 151

Query: 68  NIRRLLVLK 76
           NIRRLLVLK
Sbjct: 152 NIRRLLVLK 160

The following BLAST results are available for this feature:

BLAST of CsGy7G019710 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G019710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646468.1	1.01e-38	100.00	hypothetical protein Csa_015619 [Cucumis sativus]	[more]

BLAST of CsGy7G019710 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsGy7G019710 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 29..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G019710.1	CsGy7G019710.1	mRNA