CsGy7G019540 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G019540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein SYS1 homolog
Location	Gy14Chr7: 22236867 .. 22240039 (-)
RNA-Seq Expression	CsGy7G019540
Synteny	CsGy7G019540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCGATTTTACATTACAACTGTAGCGCATCTCTACGAAAGAAAGTTTTCTCATCAGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGAAAGGAATTCTTCCCGGAAACCTGAGTTTTCCCGCCGGTTGCTTTTATTTCTCTCTTCTCGATCTCAAGATTGACGCTTTTATTTGTTTCAGTCTTGATTTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGTGTTCGTTGTGTTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTGTTTCTCTTTTATTTGAATGTTTCTGTAGTTATATATTTTTCTGATTTTAGTTTGGGTGGATATTGGATTCGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGGGCATCTCTTGAATTTCGTTGTCAATTTGAGGGTTTGTAATTCGTATTTCAATTATTCTGGAAGGAGTTGGGTTCTGTTGAGTTTAGGTTTGGGTATAGTAATTGAGAAGCGAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGGTAAGAATTTTGTTTTAGGTTTTAGCCCCCCTCCCCCCCCCCCCCCGTATTTGGATTATATTTGCAATGCATGGTTAGTAATAATTGACAAATCTCACCTATGTTTGTCTGCCCTGTTTTTATATATTAAAAGTTAGAACTACTTTAGCCGCATGTTAATACACGACACTTGGTTTAGACAAGTTATATTTGATCCGGCCTTTGTTACATTATGTGGAATGATTTAGATTAAACGCCCTCGATGATATTGTTTTGATGTCATATTAATGTTTGTGTTTTTATATGTAACTAGGCCATTTTTTTTGTAAAATATAATTGCACCTAACTCTTTGGTGTCTGGAGTTTATTTCTTAATGGTTCATAGTATCCTGTATGTTGTTCCTTCAGGAAGTGATGTGAATTTCAATTAAGGTCCGTGTTCATGTACTAGCTGGTTAGCTACTTTTTTTGAGAACCTTTTTTTCCCTTGACTTCCTATCTCATGAATCCCTTTTAGTCTGTTTTGAGTTTGAAGAAATATATCCTTTTTGCCTTATTAGATATTACTATCACAGAAATTCACATGTTTAATATTTTGGTGATTGGGTTTGTTAGGTCTACTAATTCAAATTGCCAATGATAAAAACATAAATGTTTAAACTCTACGGAATAAGAAAGCAAGTTATTTAGAATATGCCGCTAATGGTTGGTTGTCATGCTTTCTATTTCAATATTTTGACTGATCCTGGCAGTTTTCCTCCCTTGAATTTTTTGTTTAGAATGCATGGGCGATGGATTGGGGACTGGGGTGGTTGAAGTATTGCAAAATAGTTTTGGAGTAAAACGGACAGTAGACATTGTTTCTGTTAAATGTTATCCTGGGAGTTACTTTCTAGCGTTGTACCCTCTTTTCTTATGTTTAATACACTTGCTGGCAACTAGTTTCAAAGTAATCAATTCTGAATCAATTTTTTTTTTTCTCGTATTGTGTAATATGTTTTATATAAAACTAGTGTCAGCTTCTCTTACCATTTCGTTTTTCTTGTCATACAGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGGCTTCTTTGCTCAAGGAAATCAACAGATAACCTTCTTTGACATTCAAATTGTTTAAAATTCACTATTCACAATACTACTGCTAACTAACATGGTTGACTGGAAAACAAAACATGCCAGGACAAATTTTTTAATTCATGTTAGTCTATTATTTTACTTCATTCCATGCTCGACTTTGCTGTTGAGTTGACATGTTCCAATTTGTTTATTTTTGAGAAAAAACTTGTTCTAATGTTTAAGATCATTGAGAAGTAGATGTAGTTGTACCATAATGAAAACATATTTTGGTGCAGATGTCTGAGCTCGAAATTCAAATTGCAAGAACCACCTCTTCATATGGGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATTAGAATCAAGGAAGAGGAACTAGTTTGAGATATGATGATTGACCGTAAATATTGAAAATAACCGGGATCGGTGCGCTGGATTATGATCTAGTGTTTCGAAGCTTTACACAAGTACAGGAAGTTTTTGTTACTTTTTGGGGAAAGGGTCACTTCCAATGGTGAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTATTTCTTCATACAGATGAATTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGTGTTTCAATGATATAGTGAATAGCTATGAATATAATGAAATTTTAGCATAACTAAAAGGAAATTCTGTTAGTTTATCTTGTCATTATGGACTTGAATTGCTTTAATATCACTTTCTATTGCTTAGATTCTCTTGATAAAAGGCCTTCATTGTCGCCATTATATGTTTTCCTTTTTTGTGCTAGAGTTGGCGTTTTTCTTACACTTCAAAGCATATTCTAAATCTTTGATGCAAATAATTAAAAGTATCCAAATCTTCCAATTACATTTGCACGAAAAGCCAAAAAGAACGGTACAATCTTCACTAAGCTGATTTTTTAAAAATAATTTGTTTCAATTTCAAACGAATTTGAAGTTATTTATAAACATTAT

mRNA sequence

AAATCGATTTTACATTACAACTGTAGCGCATCTCTACGAAAGAAAGTTTTCTCATCAGAGGCACCGGCCCGGACACGACCTACAAAATCTGAAGAAAAAGGGAAAGGAATTCTTCCCGGAAACCTGAGTTTTCCCGCCGGTTGCTTTTATTTCTCTCTTCTCGATCTCAAGATTGACGCTTTTATTTGTTTCAGTCTTGATTTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGTGTTCGTTGTGTTAGCGAATTGGGATTTAATCGATTTCTAGGGTTGGATTCTTCAATTGGGATTTGTTTCTCTTTTATTTGAATGTTTCTGTAGTTATATATTTTTCTGATTTTAGTTTGGGTGGATATTGGATTCGCTTGATTCAGATCCAATGAAACAAGATTGGTAAATTCTTGTGCCAGAGCCAGCGAGAGGATTTTTCAAGAGAAATGGGCATCTCTTGAATTTCGTTGTCAATTTGAGGGTTTGTAATTCGTATTTCAATTATTCTGGAAGGAGTTGGGTTCTGTTGAGTTTAGGTTTGGGTATAGTAATTGAGAAGCGAGAACCGACTGACTACTGGAGTCATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGAGCTCGAAATTCAAATTGCAAGAACCACCTCTTCATATGGGATTTTTTGGTGGCCTATCTTATTAAATTTGTTTAGCTAGTGGATAAAGCTGATGAAAAGCCAGATCAAATTAGAATCAAGGAAGAGGAACTAGTTTGAGATATGATGATTGACCGTAAATATTGAAAATAACCGGGATCGGTGCGCTGGATTATGATCTAGTGTTTCGAAGCTTTACACAAGTACAGGAAGTTTTTGTTACTTTTTGGGGAAAGGGTCACTTCCAATGGTGAAACAGGCGATGACTGATGGCTATAAAGCTTTGTTCCTTTTCTTGTTTTAATGGTTAAAGGATATATATTGTTAGTTGCTTTTATTCATTTATTTCTTCATACAGATGAATTTACAGCTTAGTTTGGAATGAGACTTCTTTTACTCCTCATTTTGCAATGTGTTTCAATGATATAGTGAATAGCTATGAATATAATGAAATTTTAGCATAACTAAAAGGAAATTCTGTTAGTTTATCTTGTCATTATGGACTTGAATTGCTTTAATATCACTTTCTATTGCTTAGATTCTCTTGATAAAAGGCCTTCATTGTCGCCATTATATGTTTTCCTTTTTTGTGCTAGAGTTGGCGTTTTTCTTACACTTCAAAGCATATTCTAAATCTTTGATGCAAATAATTAAAAGTATCCAAATCTTCCAATTACATTTGCACGAAAAGCCAAAAAGAACGGTACAATCTTCACTAAGCTGATTTTTTAAAAATAATTTGTTTCAATTTCAAACGAATTTGAAGTTATTTATAAACATTAT

Coding sequence (CDS)

ATGTTCTATGGTGCAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGTCTTCAATGTTTCTATTACCTCACTCTTGGTATATTGCTTGCAACTTTAGTGGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATATCTGTTTCTACTGCCACTGGTTGGTGTGTGATTGCTTCGTTCCTGTTAAGTGCAATTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCAGCCACACTCTATATATTCCATCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATGACATGGTGGGTTGTGAACGGAACTGGGCTTGTAGTCATGTCTTTACTGGGTGAATATCTGTGCATCAAACGGGAGCTTCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Protein sequence

MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV*

Homology

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BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot
Match: Q55E69 (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-27
Identity = 59/147 (40.14%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFY    WDP LI+ QI+ +QC YY+ L  +L  L     S +SL   F+Y +I+  + +
Sbjct: 1   MFYKYNAWDPKLIIGQILSIQCLYYILLAGILYLLDSMFSSSLSLEQMFEYQSINTHSQS 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           G  V+ +FL++++ G+  L Y++ER+KKCLD +AT+   H  I  I  G+P ++ WW + 
Sbjct: 61  GRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIVWIVSGFPKTVVWWAIQ 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITR 148
             G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 121 LIGMVIMAMIGEYLCMRKELMDIPLQR 147

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BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot
Match: A7S6Y0 (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.8e-25
Identity = 56/140 (40.00%), Postives = 94/140 (67.14%), Query Frame = 0


Query: 7   VWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGWCVIA 66
           VWDP LI++QI+ +QC +Y++LG+ +  +     S  SL  FF Y  + +S+  G  ++ 
Sbjct: 9   VWDPVLIISQIIAIQCTFYISLGVWVLIVDYWSGSIHSLDQFFAYKELDISSLKGKLLMI 68

Query: 67  SFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVNGTGLVV 126
           +F L+++ GA  L ++++RAK+CLDF  T +I HL  C IY G+P S TWW++N   L +
Sbjct: 69  AFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIYAGFPFSWTWWLLNIICLAL 128

Query: 127 MSLLGEYLCIKRELREIPIT 147
           M+++GE++C+K EL+ I ++
Sbjct: 129 MAVIGEFVCMKTELKAIKVS 148

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BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot
Match: Q8N2H4 (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGW 62
           + + VWDP LI++QIV +Q  YY +LG+ LA + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGG-WPSSMTWWVVNG 122
             + SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot
Match: A4K2N5 (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGW 62
           + + VWDP LI++QIV +Q  YY +LG+ LA + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGG-WPSSMTWWVVNG 122
             + SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot
Match: A4K2W1 (Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 65/152 (42.76%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 3   YGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTATGW 62
           + + VWDP LI++QIV +Q  YY +LG+ LA + G   S  SL   FD   +  ST  G 
Sbjct: 5   FRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGR 64

Query: 63  CVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGG-WPSSMTWWVVNG 122
             + SF+L+A+  A  L+Y I R K+CLDF  T++ FHL  C  Y   +PS++TWW+V  
Sbjct: 65  LSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQA 124

Query: 123 TGLVVMSLLGEYLCIKRELREIPITRL-RSNV 153
             + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 125 VCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

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BLAST of CsGy7G019540 vs. NCBI nr
Match: XP_011659561.1 (protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_016132 [Cucumis sativus])

HSP 1 Score: 301 bits (771), Expect = 5.45e-103
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. NCBI nr
Match: XP_038898906.1 (protein SYS1 homolog [Benincasa hispida])

HSP 1 Score: 298 bits (762), Expect = 1.29e-101
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGILLATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. NCBI nr
Match: XP_008462142.1 (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 295 bits (756), Expect = 1.06e-100
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGA VWDPWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. NCBI nr
Match: XP_022143685.1 (protein SYS1 homolog [Momordica charantia])

HSP 1 Score: 290 bits (743), Expect = 1.02e-98
Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYG VVWDPWLIVAQIVC+QC YY+TLGILLATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI HLFICIIYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. NCBI nr
Match: XP_022953394.1 (protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290 bits (742), Expect = 1.44e-98
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YLVYLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL
Match: A0A0A0KC23 (Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1)

HSP 1 Score: 301 bits (771), Expect = 2.64e-103
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL
Match: A0A1S3CGS5 (Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1)

HSP 1 Score: 295 bits (756), Expect = 5.12e-101
Identity = 148/152 (97.37%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGA VWDPWLIVAQIVCLQCFYYLTLGI LATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAGVWDPWLIVAQIVCLQCFYYLTLGIFLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL
Match: A0A6J1CPG7 (Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1)

HSP 1 Score: 290 bits (743), Expect = 4.92e-99
Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYG VVWDPWLIVAQIVC+QC YY+TLGILLATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI HLFICIIYGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL
Match: A0A6J1GPI7 (Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1)

HSP 1 Score: 290 bits (742), Expect = 6.99e-99
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFLLSA+AGA YLVYLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL
Match: A0A6J1JZ66 (Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.41e-98
Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYGAVVWDPWLIVAQIVCLQC YYLTLGIL+ATLVGTRVSRISLVYFFDYATI+VSTAT
Sbjct: 1   MFYGAVVWDPWLIVAQIVCLQCLYYLTLGILIATLVGTRVSRISLVYFFDYATITVSTAT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GWCVIASFL+SA+AGA YLVYLIERAKKCLDFAATLYI HLFICI+YGGWPSSMTWWVVN
Sbjct: 61  GWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFICIVYGGWPSSMTWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152
           GTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of CsGy7G019540 vs. TAIR 10
Match: AT1G79990.1 (structural molecules )

HSP 1 Score: 233.8 bits (595), Expect = 9.2e-62
Identity = 109/151 (72.19%), Postives = 126/151 (83.44%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT++ ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSN 152
           GTGL VM+LL EYLCIKRE REIP+ R  SN
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSN 151

[Close]

BLAST of CsGy7G019540 vs. TAIR 10
Match: AT1G79990.2 (structural molecules )

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-61
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT++ ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of CsGy7G019540 vs. TAIR 10
Match: AT1G79990.4 (structural molecules )

HSP 1 Score: 233.4 bits (594), Expect = 1.2e-61
Identity = 109/152 (71.71%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MFYGAVVWDPWLIVAQIVCLQCFYYLTLGILLATLVGTRVSRISLVYFFDYATISVSTAT 60
           MFYG  VWDPWLIV QI+CLQC YYLTLG+     +G RV R+SLVYFFDYAT++ ST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSMTWWVVN 120
           GW VIASFL S++AGA Y+++L+ERA+KCLDF+ATLYI HLF CI+YGGWPSSM WWVVN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGLVVMSLLGEYLCIKRELREIPITRLRSNV 153
           GTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

The following BLAST results are available for this feature:

BLAST of CsGy7G019540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55E69	7.2e-27	40.14	Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1	[more]
A7S6Y0	8.8e-25	40.00	Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1	[more]
Q8N2H4	1.1e-24	42.76	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1	[more]
A4K2N5	1.1e-24	42.76	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1	[more]
A4K2W1	1.1e-24	42.76	Protein SYS1 homolog OS=Pongo abelii OX=9601 GN=SYS1 PE=3 SV=1	[more]

BLAST of CsGy7G019540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659561.1	5.45e-103	100.00	protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_0161...	[more]
XP_038898906.1	1.29e-101	98.68	protein SYS1 homolog [Benincasa hispida]	[more]
XP_008462142.1	1.06e-100	97.37	PREDICTED: protein SYS1 homolog [Cucumis melo]	[more]
XP_022143685.1	1.02e-98	94.74	protein SYS1 homolog [Momordica charantia]	[more]
XP_022953394.1	1.44e-98	95.39	protein SYS1 homolog [Cucurbita moschata] >KAG7014094.1 Protein SYS1-like protei...	[more]

BLAST of CsGy7G019540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC23	2.64e-103	100.00	Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1	[more]
A0A1S3CGS5	5.12e-101	97.37	Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1	[more]
A0A6J1CPG7	4.92e-99	94.74	Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1	[more]
A0A6J1GPI7	6.99e-99	95.39	Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1	[more]
A0A6J1JZ66	1.41e-98	94.74	Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1	[more]

BLAST of CsGy7G019540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79990.1	9.2e-62	72.19	structural molecules	[more]
AT1G79990.2	1.2e-61	71.71	structural molecules	[more]
AT1G79990.4	1.2e-61	71.71	structural molecules	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 5..144 e-value: 3.2E-45 score: 153.8
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 1..151
IPR016973	Integral membrane protein SYS1	PIRSF	PIRSF031402	SYS1_homolog	coord: 1..152 e-value: 8.3E-58 score: 192.7
None	No IPR available	PANTHER	PTHR12952:SF3	PROTEIN SYS1 HOMOLOG	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G019540.2	CsGy7G019540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006895	Golgi to endosome transport
biological_process	GO:0043001	Golgi to plasma membrane protein transport
biological_process	GO:0034067	protein localization to Golgi apparatus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0000139	Golgi membrane