CsGy7G018980 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G018980
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDUF761 domain-containing protein
LocationGy14Chr7: 21770685 .. 21771040 (-)
RNA-Seq ExpressionCsGy7G018980
SyntenyCsGy7G018980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATTCAAACAAGGTTATTCTCATTATGAAGAAGAACTCCGAATTACCAGCTGTTTCTGCTGCTGGTGGTATTAATAAGCTGCAGCCACCGCCGTGTCCGTCGTCCCCTCTCCGTTTCTGCGGCGGAGAGAGGAGGAAACTGGAGAGGACGGTGACAGTGACGGAAGATGTCAATGAAAGTGCTGAAGCTTTCATTCAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATTCTGGCTGGAGAAACTTGAATTATTATTCCTTTTATGGTCTTTAATTATTATTATTATTATATGTTTGATTCATATTTATCACTCCAATAAAGGG

mRNA sequence

CAAAAATTCAAACAAGGTTATTCTCATTATGAAGAAGAACTCCGAATTACCAGCTGTTTCTGCTGCTGGTGGTATTAATAAGCTGCAGCCACCGCCGTGTCCGTCGTCCCCTCTCCGTTTCTGCGGCGGAGAGAGGAGGAAACTGGAGAGGACGGTGACAGTGACGGAAGATGTCAATGAAAGTGCTGAAGCTTTCATTCAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATTCTGGCTGGAGAAACTTGAATTATTATTCCTTTTATGGTCTTTAATTATTATTATTATTATATGTTTGATTCATATTTATCACTCCAATAAAGGG

Coding sequence (CDS)

ATGAAGAAGAACTCCGAATTACCAGCTGTTTCTGCTGCTGGTGGTATTAATAAGCTGCAGCCACCGCCGTGTCCGTCGTCCCCTCTCCGTTTCTGCGGCGGAGAGAGGAGGAAACTGGAGAGGACGGTGACAGTGACGGAAGATGTCAATGAAAGTGCTGAAGCTTTCATTCAGAAGTTTAGAAATCAATTGTTGATTCAGAGGCTTCAATCCATTGAAAATTATGAGAAAATTCTGGCTGGAGAAACTTGA

Protein sequence

MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILAGET*
Homology
BLAST of CsGy7G018980 vs. NCBI nr
Match: KGN45285.1 (hypothetical protein Csa_016012 [Cucumis sativus])

HSP 1 Score: 166 bits (421), Expect = 1.43e-51
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1   MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF 60
           MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF 78

Query: 61  RNQLLIQRLQSIENYEKILAGET 83
           RNQLLIQRLQSIENYEKILAGET
Sbjct: 79  RNQLLIQRLQSIENYEKILAGET 101

BLAST of CsGy7G018980 vs. NCBI nr
Match: KAA0058765.1 (DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 141 bits (356), Expect = 7.48e-42
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1  MKKNSELPAVSAA-GGINKLQPPPCPSSPLRFCGGERRKLERTVTVT--EDVNESAEAFI 60
          MKK+SELP VSAA GGINKLQPPP PSSPLR CGGERRKLERTVTVT  EDV+ESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 QKFRNQLLIQRLQSIENYEKILAGET 83
          +KFRNQLLIQRLQSIENYE+ILAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of CsGy7G018980 vs. NCBI nr
Match: KAG6575588.1 (hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014129.1 hypothetical protein SDJN02_24302, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.4 bits (233), Expect = 3.87e-23
Identity = 56/90 (62.22%), Postives = 64/90 (71.11%), Query Frame = 0

Query: 1  MKKNSELP---AVSAAGGINKLQPPPCPSSPLRFCGGERRKLERT----VTVTEDVNESA 60
          MK  S+ P   A +AAG   + QPPP P         ER K+E+T    V+VTEDVNESA
Sbjct: 1  MKNTSQPPFSAAAAAAGSCKQQQPPPPPRQ-------ERTKMEKTPTVTVSVTEDVNESA 60

Query: 61 EAFIQKFRNQLLIQRLQSIENYEKILAGET 83
          EAFI++FRNQLLIQRLQSIENYEKILAGET
Sbjct: 61 EAFIKRFRNQLLIQRLQSIENYEKILAGET 83

BLAST of CsGy7G018980 vs. NCBI nr
Match: KAB2611398.1 (hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 66.2 bits (160), Expect = 6.61e-12
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 37 RKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILAG 81
          +KLER  T  ED+NESAEAFI+KFR QLLIQRL+SIENYE++LAG
Sbjct: 51 KKLERKST--EDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of CsGy7G018980 vs. NCBI nr
Match: KAF8026756.1 (hypothetical protein BT93_F3281 [Corymbia citriodora subsp. variegata])

HSP 1 Score: 65.9 bits (159), Expect = 1.11e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 38 KLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILA 80
          KLER  T  ED+NESAEAFIQKFR QL+IQRL+SIENYEK+LA
Sbjct: 59 KLERKTT--EDINESAEAFIQKFRQQLMIQRLESIENYEKMLA 99

BLAST of CsGy7G018980 vs. ExPASy TrEMBL
Match: A0A0A0K6D1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 6.92e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1   MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF 60
           MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF
Sbjct: 19  MKKNSELPAVSAAGGINKLQPPPCPSSPLRFCGGERRKLERTVTVTEDVNESAEAFIQKF 78

Query: 61  RNQLLIQRLQSIENYEKILAGET 83
           RNQLLIQRLQSIENYEKILAGET
Sbjct: 79  RNQLLIQRLQSIENYEKILAGET 101

BLAST of CsGy7G018980 vs. ExPASy TrEMBL
Match: A0A5D3CK25 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002120 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 3.62e-42
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query: 1  MKKNSELPAVSAA-GGINKLQPPPCPSSPLRFCGGERRKLERTVTVT--EDVNESAEAFI 60
          MKK+SELP VSAA GGINKLQPPP PSSPLR CGGERRKLERTVTVT  EDV+ESAEAFI
Sbjct: 1  MKKSSELPTVSAAAGGINKLQPPPSPSSPLRGCGGERRKLERTVTVTVTEDVDESAEAFI 60

Query: 61 QKFRNQLLIQRLQSIENYEKILAGET 83
          +KFRNQLLIQRLQSIENYE+ILAGET
Sbjct: 61 KKFRNQLLIQRLQSIENYERILAGET 86

BLAST of CsGy7G018980 vs. ExPASy TrEMBL
Match: A0A5N5G7Z8 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019430 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.20e-12
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 37 RKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILAG 81
          +KLER  T  ED+NESAEAFI+KFR QLLIQRL+SIENYE++LAG
Sbjct: 51 KKLERKST--EDINESAEAFIKKFRKQLLIQRLESIENYEQMLAG 93

BLAST of CsGy7G018980 vs. ExPASy TrEMBL
Match: A0A7J8Y8A3 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_002377 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.17e-11
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0

Query: 33 GGERRKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILA 80
          G    KLE+  +V  D+NESAEAFIQKFR+QLL+QRL+SIENYEK+LA
Sbjct: 43 GAATNKLEKKASV--DINESAEAFIQKFRHQLLLQRLESIENYEKMLA 88

BLAST of CsGy7G018980 vs. ExPASy TrEMBL
Match: A0A7J9F2A9 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_003688 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.61e-11
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0

Query: 33 GGERRKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIENYEKILA 80
          G    KLE+  +V  D+NESAEAFIQKFR+QLL+QRL+SIENYEK+LA
Sbjct: 28 GAATNKLEKKPSV--DINESAEAFIQKFRHQLLLQRLESIENYEKMLA 73

BLAST of CsGy7G018980 vs. TAIR 10
Match: AT1G15385.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0

Query: 37 RKLERTVTVTEDVNESAEAFIQKFRNQLLIQRLQSIEN 75
          +K+ER  ++  DV++SAEAFI KFRNQLL+QRL+SIEN
Sbjct: 32 KKVERKASM--DVDKSAEAFITKFRNQLLLQRLESIEN 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN45285.11.43e-51100.00hypothetical protein Csa_016012 [Cucumis sativus][more]
KAA0058765.17.48e-4288.37DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK10559.1 DUF761 d... [more]
KAG6575588.13.87e-2362.22hypothetical protein SDJN03_26227, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB2611398.16.61e-1275.56hypothetical protein D8674_019430 [Pyrus ussuriensis x Pyrus communis][more]
KAF8026756.11.11e-1179.07hypothetical protein BT93_F3281 [Corymbia citriodora subsp. variegata][more]
Match NameE-valueIdentityDescription
A0A0A0K6D16.92e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433160 PE=4 SV=1[more]
A0A5D3CK253.62e-4288.37DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5N5G7Z83.20e-1275.56Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A7J8Y8A31.17e-1168.75Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_002377 PE=4 SV=1[more]
A0A7J9F2A91.61e-1168.75Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_003688 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G15385.11.8e-0665.79unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761,... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 47..80
e-value: 1.4E-13
score: 50.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR33098COTTON FIBER (DUF761)coord: 1..82
NoneNo IPR availablePANTHERPTHR33098:SF82DUF761 DOMAIN PROTEINcoord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G018980.1CsGy7G018980.1mRNA