CsGy7G018590 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G018590
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPentatricopeptide repeat-containing protein
LocationGy14Chr7: 21556889 .. 21557434 (+)
RNA-Seq ExpressionCsGy7G018590
SyntenyCsGy7G018590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACTTCGTTTTGTAATCTTATTGATGCACTTTATGAGGGATTGCGATTCGAGTACGAAGATTCATAACTTAATTCTTCATGGTTGCCGTAAAATTGGGCGGTGGAGTAAATGTAGAGAATTTTGGGAGGTGATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGA

mRNA sequence

ATGAAACTTCGTTTTGTAATCTTATTGATGCACTTTATGAGGGATTGCGATTCGAGTACGAAGATTCATAACTTAATTCTTCATGGTTGCCGTAAAATTGGGCGGTGGAGTAAATGTAGAGAATTTTGGGAGGTGATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGA

Coding sequence (CDS)

ATGAAACTTCGTTTTGTAATCTTATTGATGCACTTTATGAGGGATTGCGATTCGAGTACGAAGATTCATAACTTAATTCTTCATGGTTGCCGTAAAATTGGGCGGTGGAGTAAATGTAGAGAATTTTGGGAGGTGATGGGTAAGAAGGGTGTTCGTAAGGATTTGCAATCGTACTTGTTATATATGGATATACAATGCAAAACTGGGAAGTCTTGGGAGGCTGTTAAATTGTACATGGAGATGAAAAATAAGGGAATGAAATTGGATGTTGTGGCCTATAATACAGCGATTCATGCAGTTGGGATTTCGGAAGATGTCGATTTCACCAACAGAGTGTTTCATGAGATGAAGGGAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTATTATTAAGCTATTTTGTGAGAATGGAAGATTCAAGGATGCTCATGTGATTCTCGACCAAATGCTCAAATACTGTCCACCGAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCTGAAAGAGATTCTCATGTTATCGACAGGATGA

Protein sequence

MKLRFVILLMHFMRDCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILMLSTG*
Homology
BLAST of CsGy7G018590 vs. ExPASy Swiss-Prot
Match: Q9M8M3 (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.5e-52
Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 0

Query: 18  SSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKL 77
           S+TKIHNLIL G  K+G W KC+E+W+ M  +GV KDL SY +YMDI CK+GK W+AVKL
Sbjct: 187 SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKL 246

Query: 78  YMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCE 137
           Y EMK++ MKLDVVAYNT I A+G S+ V+F  RVF EM+  GC+PNV T NTIIKL CE
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306

Query: 138 NGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 179
           +GR +DA+ +LD+M K  C P+ ITY C F  LEK  EIL L
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSL 348

BLAST of CsGy7G018590 vs. ExPASy Swiss-Prot
Match: Q9ZU27 (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.7e-17
Identity = 46/155 (29.68%), Postives = 88/155 (56.77%), Query Frame = 0

Query: 18  SSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKL 77
           + T ++N +     K+ + S   + +E M K G   D+ +Y + +    + G+  EA+ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499

Query: 78  YMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCE 137
           + E++    K D+++YN+ I+ +G + DVD  +  F EM+  G  P+VVT +T+++ F +
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559

Query: 138 NGRFKDAHVILDQML-KYCPPNVITYHCFFRSLEK 172
             R + A+ + ++ML K C PN++TY+     LEK
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594

BLAST of CsGy7G018590 vs. ExPASy Swiss-Prot
Match: Q9FZ19 (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.4e-16
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0

Query: 24  NLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKN 83
           N++L G +      +   F+E M  KG++ D+ +Y   +D+ CK  +  +A KL  +M+ 
Sbjct: 218 NILLSGWKSS---EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 277

Query: 84  KGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKD 143
           +    DV+ Y T I  +G+    D    V  EMK  GC P+V   N  I+ FC   R  D
Sbjct: 278 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD 337

Query: 144 AHVILDQMLKY-CPPNVITYHCFFRSLEKLKEI 176
           A  ++D+M+K    PN  TY+ FFR L    ++
Sbjct: 338 ADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367

BLAST of CsGy7G018590 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-16
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 0

Query: 20  TKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYM 79
           T  +N+IL+G   I R  K  E  + M ++G+  +L +Y   +    + G+   A + ++
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254

Query: 80  EMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENG 139
           EMK +  ++DVV Y T +H  G++ ++     VF EM   G  P+V T N +I++ C+  
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314

Query: 140 RFKDAHVILDQMLKY-CPPNVITYHCFFRSL 170
             ++A V+ ++M++    PNV TY+   R L
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345

BLAST of CsGy7G018590 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 6.8e-16
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 0

Query: 21  KIHNLILHG-CRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYM 80
           K  N++L+G C  IG   +    W  MG  GV+ D+ SY   +    K G   + +KL+ 
Sbjct: 267 KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 326

Query: 81  EMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEM-KGMGCKPNVVTCNTIIKLFCEN 140
            MK + ++ D   YN  +HA+  +  V     +   M +  G +PNVVT N++IK  C+ 
Sbjct: 327 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386

Query: 141 GRFKDAHVILDQML-KYCPPNVITYHCFFRSLEKLKEILML 179
            + ++A  + D+ML K   P + TYH F R L   +E+  L
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 427

BLAST of CsGy7G018590 vs. NCBI nr
Match: XP_031745027.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis sativus])

HSP 1 Score: 355 bits (911), Expect = 3.34e-120
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA
Sbjct: 189 DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 248

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL
Sbjct: 249 VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 308

Query: 135 FCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILML
Sbjct: 309 FCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILML 352

BLAST of CsGy7G018590 vs. NCBI nr
Match: KAE8646431.1 (hypothetical protein Csa_016697 [Cucumis sativus])

HSP 1 Score: 290 bits (742), Expect = 2.69e-98
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query: 46  MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 105
           MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED
Sbjct: 1   MGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKNKGMKLDVVAYNTAIHAVGISED 60

Query: 106 VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 165
           VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF
Sbjct: 61  VDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKDAHVILDQMLKYCPPNVITYHCF 120

Query: 166 FRSLEKLKEILMLSTG 181
           FRSLEKLKEILMLSTG
Sbjct: 121 FRSLEKLKEILMLSTG 136

BLAST of CsGy7G018590 vs. NCBI nr
Match: KAG7014158.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (746), Expect = 2.57e-94
Identity = 137/167 (82.04%), Postives = 147/167 (88.02%), Query Frame = 0

Query: 13  MRDCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSW 72
           M +C +STKIHNLIL G  K+G WSKCREFWE M KKGVRKDL SY +YMDIQCK+GK W
Sbjct: 191 MLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPW 250

Query: 73  EAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTII 132
           +AVKLY EMK KGMKLDVVAYNT IHA+GISE VDF +RVFHEMK MGCKPNVVTCNTII
Sbjct: 251 KAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTII 310

Query: 133 KLFCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           KLFCENGRFKDAH++LDQMLK  CPPNVITYHCFFRSLEK KEILML
Sbjct: 311 KLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILML 357

BLAST of CsGy7G018590 vs. NCBI nr
Match: XP_008461152.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis melo])

HSP 1 Score: 291 bits (744), Expect = 3.74e-94
Identity = 136/165 (82.42%), Postives = 146/165 (88.48%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLIL G  K+G WSKCR+FWE M KKGVRKDL SY +YMDIQCK+GK W+A
Sbjct: 182 DCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKA 241

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHAVGISE VDF +RVFHEMK MGCKPNVVTCNT+IKL
Sbjct: 242 VKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 301

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAH++LDQMLK  C PNVITYHCFFRSLEK KEIL+L
Sbjct: 302 FCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILIL 346

BLAST of CsGy7G018590 vs. NCBI nr
Match: XP_011659515.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis sativus] >KGN45236.1 hypothetical protein Csa_016795 [Cucumis sativus])

HSP 1 Score: 291 bits (744), Expect = 3.74e-94
Identity = 136/165 (82.42%), Postives = 146/165 (88.48%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLIL G  K+G WSKCR+FWE M KKGVRKDL SY +YMDIQCK+GK W+A
Sbjct: 182 DCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKA 241

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHAVGISE VDF +RVFHEMK MGCKPNVVTCNT+IKL
Sbjct: 242 VKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 301

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAH++LDQMLK  C PNVITYHCFFRSLEK KEIL+L
Sbjct: 302 FCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVL 346

BLAST of CsGy7G018590 vs. ExPASy TrEMBL
Match: A0A0A0K6U8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432190 PE=4 SV=1)

HSP 1 Score: 303 bits (775), Expect = 1.49e-101
Identity = 146/169 (86.39%), Postives = 150/169 (88.76%), Query Frame = 0

Query: 13  MRDCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSW 72
           +RD  S   + + +  G R         EFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSW
Sbjct: 115 LRDETSFCNLIDALYEGLR-------FEEFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSW 174

Query: 73  EAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTII 132
           EAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTII
Sbjct: 175 EAVKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTII 234

Query: 133 KLFCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILMLSTG 181
           KLFCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILMLSTG
Sbjct: 235 KLFCENGRFKDAHVILDQMLKYCPPNVITYHCFFRSLEKLKEILMLSTG 276

BLAST of CsGy7G018590 vs. ExPASy TrEMBL
Match: A0A0A0KBR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432170 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 1.81e-94
Identity = 136/165 (82.42%), Postives = 146/165 (88.48%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLIL G  K+G WSKCR+FWE M KKGVRKDL SY +YMDIQCK+GK W+A
Sbjct: 182 DCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKA 241

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHAVGISE VDF +RVFHEMK MGCKPNVVTCNT+IKL
Sbjct: 242 VKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 301

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAH++LDQMLK  C PNVITYHCFFRSLEK KEIL+L
Sbjct: 302 FCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVL 346

BLAST of CsGy7G018590 vs. ExPASy TrEMBL
Match: A0A1S3CFA1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499823 PE=4 SV=1)

HSP 1 Score: 291 bits (744), Expect = 1.81e-94
Identity = 136/165 (82.42%), Postives = 146/165 (88.48%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLIL G  K+G WSKCR+FWE M KKGVRKDL SY +YMDIQCK+GK W+A
Sbjct: 182 DCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKA 241

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHAVGISE VDF +RVFHEMK MGCKPNVVTCNT+IKL
Sbjct: 242 VKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 301

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAH++LDQMLK  C PNVITYHCFFRSLEK KEIL+L
Sbjct: 302 FCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILIL 346

BLAST of CsGy7G018590 vs. ExPASy TrEMBL
Match: A0A5A7UVK9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001970 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 7.27e-94
Identity = 135/165 (81.82%), Postives = 146/165 (88.48%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DCDSSTKIHNLIL G  K+G WSKCR+FWE M KKGVRKDL SY +YMDI+CK+GK W+A
Sbjct: 182 DCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIRCKSGKPWKA 241

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHAVGISE VDF +RVFHEMK MGCKPNVVTCNT+IKL
Sbjct: 242 VKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKL 301

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAH++LDQMLK  C PNVITYHCFFRSLEK KEIL+L
Sbjct: 302 FCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILIL 346

BLAST of CsGy7G018590 vs. ExPASy TrEMBL
Match: A0A6J1D599 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017413 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 1.00e-93
Identity = 135/165 (81.82%), Postives = 144/165 (87.27%), Query Frame = 0

Query: 15  DCDSSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEA 74
           DC++STKIHNLIL G  K+G WSKCREFWE M  KGVRKDL SY +YMDIQCK+GK W+A
Sbjct: 193 DCNASTKIHNLILRGWLKMGWWSKCREFWEEMDNKGVRKDLHSYSIYMDIQCKSGKPWKA 252

Query: 75  VKLYMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKL 134
           VKLY EMK KGMKLDVVAYNT IHA+GISE VDF +RVFHEMK MGCKPNVVTCNTIIKL
Sbjct: 253 VKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKL 312

Query: 135 FCENGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 178
           FCENGRFKDAHV+LDQMLK  CPPNVITYHCFFRS EK  EILML
Sbjct: 313 FCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSFEKPNEILML 357

BLAST of CsGy7G018590 vs. TAIR 10
Match: AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53
Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 0

Query: 18  SSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKL 77
           S+TKIHNLIL G  K+G W KC+E+W+ M  +GV KDL SY +YMDI CK+GK W+AVKL
Sbjct: 187 SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKL 246

Query: 78  YMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCE 137
           Y EMK++ MKLDVVAYNT I A+G S+ V+F  RVF EM+  GC+PNV T NTIIKL CE
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306

Query: 138 NGRFKDAHVILDQMLKY-CPPNVITYHCFFRSLEKLKEILML 179
           +GR +DA+ +LD+M K  C P+ ITY C F  LEK  EIL L
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSL 348

BLAST of CsGy7G018590 vs. TAIR 10
Match: AT1G51965.1 (ABA Overly-Sensitive 5 )

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18
Identity = 46/155 (29.68%), Postives = 88/155 (56.77%), Query Frame = 0

Query: 18  SSTKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKL 77
           + T ++N +     K+ + S   + +E M K G   D+ +Y + +    + G+  EA+ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499

Query: 78  YMEMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCE 137
           + E++    K D+++YN+ I+ +G + DVD  +  F EM+  G  P+VVT +T+++ F +
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK 559

Query: 138 NGRFKDAHVILDQML-KYCPPNVITYHCFFRSLEK 172
             R + A+ + ++ML K C PN++TY+     LEK
Sbjct: 560 TERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594

BLAST of CsGy7G018590 vs. TAIR 10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-18
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0

Query: 24  NLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYMEMKN 83
           N++L G +      +   F+E M  KG++ D+ +Y   +D+ CK  +  +A KL  +M+ 
Sbjct: 218 NILLSGWKSS---EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 277

Query: 84  KGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENGRFKD 143
           +    DV+ Y T I  +G+    D    V  EMK  GC P+V   N  I+ FC   R  D
Sbjct: 278 EEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGD 337

Query: 144 AHVILDQMLKY-CPPNVITYHCFFRSLEKLKEI 176
           A  ++D+M+K    PN  TY+ FFR L    ++
Sbjct: 338 ADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367

BLAST of CsGy7G018590 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-17
Identity = 46/151 (30.46%), Postives = 82/151 (54.30%), Query Frame = 0

Query: 20  TKIHNLILHGCRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYM 79
           T  +N+IL+G   I R  K  E  + M ++G+  +L +Y   +    + G+   A + ++
Sbjct: 195 TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFL 254

Query: 80  EMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEMKGMGCKPNVVTCNTIIKLFCENG 139
           EMK +  ++DVV Y T +H  G++ ++     VF EM   G  P+V T N +I++ C+  
Sbjct: 255 EMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKD 314

Query: 140 RFKDAHVILDQMLKY-CPPNVITYHCFFRSL 170
             ++A V+ ++M++    PNV TY+   R L
Sbjct: 315 NVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345

BLAST of CsGy7G018590 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.8e-17
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 0

Query: 21  KIHNLILHG-CRKIGRWSKCREFWEVMGKKGVRKDLQSYLLYMDIQCKTGKSWEAVKLYM 80
           K  N++L+G C  IG   +    W  MG  GV+ D+ SY   +    K G   + +KL+ 
Sbjct: 267 KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 326

Query: 81  EMKNKGMKLDVVAYNTAIHAVGISEDVDFTNRVFHEM-KGMGCKPNVVTCNTIIKLFCEN 140
            MK + ++ D   YN  +HA+  +  V     +   M +  G +PNVVT N++IK  C+ 
Sbjct: 327 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386

Query: 141 GRFKDAHVILDQML-KYCPPNVITYHCFFRSLEKLKEILML 179
            + ++A  + D+ML K   P + TYH F R L   +E+  L
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 427

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M8M34.5e-5261.11Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
Q9ZU274.7e-1729.68Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidop... [more]
Q9FZ191.4e-1632.68Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th... [more]
Q9S7R45.2e-1630.46Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
Q9LFQ46.8e-1632.30Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
XP_031745027.13.34e-120100.00LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80550, mito... [more]
KAE8646431.12.69e-98100.00hypothetical protein Csa_016697 [Cucumis sativus][more]
KAG7014158.12.57e-9482.04Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_008461152.13.74e-9482.42PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
XP_011659515.13.74e-9482.42pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis sa... [more]
Match NameE-valueIdentityDescription
A0A0A0K6U81.49e-10186.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432190 PE=4 SV=1[more]
A0A0A0KBR11.81e-9482.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432170 PE=4 SV=1[more]
A0A1S3CFA11.81e-9482.42pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis ... [more]
A0A5A7UVK97.27e-9481.82Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1D5991.00e-9381.82pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT1G80550.13.2e-5361.11Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G51965.13.3e-1829.68ABA Overly-Sensitive 5 [more]
AT1G02420.19.7e-1832.68Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74900.13.7e-1730.46Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15010.14.8e-1732.30Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..104
e-value: 1.1E-16
score: 62.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 105..176
e-value: 8.3E-17
score: 63.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 24..51
e-value: 0.025
score: 14.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 77..137
e-value: 2.5E-14
score: 53.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 22..52
e-value: 7.3E-4
score: 17.5
coord: 91..125
e-value: 5.6E-5
score: 21.1
coord: 126..153
e-value: 6.4E-7
score: 27.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 54..88
score: 9.185627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..154
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 19..53
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 89..123
score: 10.05157
NoneNo IPR availablePANTHERPTHR47942:SF22OSJNBA0033G05.8 PROTEINcoord: 17..178
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 17..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G018590.2CsGy7G018590.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding