CsGy7G017990 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G017990
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr7: 21145412 .. 21145717 (-)
RNA-Seq ExpressionCsGy7G017990
SyntenyCsGy7G017990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

mRNA sequence

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Coding sequence (CDS)

ATGGAATCAATAGCAGTATTCTTCCGATTAAGGAGGTTGAAGAAGACGATGGTGATTCAATTGAATCCAGAAGCTGAGCCGGAGAAGAACGACGGAAACCGACGTGATCGACCGCTCATTCCTGTTCGATTCCTTCGGCTCTTCGGCGGTGTGAAGGGTCAGAAATTTATGGCTTTTGGATTATCGGATTCGGAAAGTGTGAAGTTCGATTATTTTGACCTTTGCTGCAAGTTTTTCCCCGTCGGCTTCGTGCATCGGTGTCATCGAGATTTTGGTTTAAATTTATTCGAGGAAAAAATATCTTAA

Protein sequence

MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFGLSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS*
Homology
[Close]
BLAST of CsGy7G017990 vs. NCBI nr
Match: KGN45174.1 (hypothetical protein Csa_016039 [Cucumis sativus])

HSP 1 Score: 214 bits (545), Expect = 3.64e-70
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

[Close]
BLAST of CsGy7G017990 vs. NCBI nr
Match: KAG6575658.1 (hypothetical protein SDJN03_26297, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 2.32e-15
Identity = 45/85 (52.94%), Postives = 50/85 (58.82%), Query Frame = 0 

Query: 1  MESIAVFFRLRRLKKTMVIQLNPEA---EPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFM 60
          M+ I +FFRL RL KTM+IQLNPEA   EPEK DG R D+PLIP RF RLFG VK     
Sbjct: 1  MKPITLFFRLTRLTKTMMIQLNPEAPQTEPEKEDGIRPDQPLIPARFFRLFGEVK----- 60

Query: 61 AFGLSDSESVKFDYFDLCCKFFPVG 82
               D  +     F  C  F PVG
Sbjct: 61 -----DRSACSVAAFSRCSDF-PVG 74

[Close]
BLAST of CsGy7G017990 vs. ExPASy TrEMBL
Match: A0A0A0K8G2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429600 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 1.76e-70
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60
           MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG
Sbjct: 1   MESIAVFFRLRRLKKTMVIQLNPEAEPEKNDGNRRDRPLIPVRFLRLFGGVKGQKFMAFG 60

Query: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101
           LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS
Sbjct: 61  LSDSESVKFDYFDLCCKFFPVGFVHRCHRDFGLNLFEEKIS 101

The following BLAST results are available for this feature:
BLAST of CsGy7G017990 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy7G017990 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45174.13.64e-70100.00hypothetical protein Csa_016039 [Cucumis sativus][more]
KAG6575658.12.32e-1552.94hypothetical protein SDJN03_26297, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsGy7G017990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8G21.76e-70100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429600 PE=4 SV=1[more]
BLAST of CsGy7G017990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G017990.2CsGy7G017990.2mRNA