CsGy7G016840 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G016840
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	nitrogen regulatory protein P-II homolog
Location	Gy14Chr7: 20367584 .. 20371173 (-)
RNA-Seq Expression	CsGy7G016840
Synteny	CsGy7G016840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAATGCAAAACAAACAAAACTTCTTCCAATCATAATTTATTAATTTTTTTGAAGCGGAAATTCCAACGTGAACTCTGAAACCTCCGATCAGTTCGTCGTCATCACTCTGCTTCTCGAATCTCAACTCTCATGGCGGTGGCGGCAACTACAACGAACCTCACTGCTCTTCTTCTTCCTCGTCCACAGTTTCATCACTTCACTTCTTTCTCTTTCATCACTCCTTACTTCACCACCGTCGGACTTTCTCACTTCAACCTCGCCAACAACCACCCTTCCAATCGCCAAATTCTCCCTCTCGTCAAAGCCACCCAAGGCTCTCTCGGTATGTTTCGCTCGCCACACATTCTATCACTCTTCAGCTTCCCAATTTCTAATATGCTGCTGTTTTTTTTTTTTCTTTGTAGATTATGTGCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTTAGGTACCAAACCTACTTCATCGTGTTCTGTACTGCTACATTTGGGGTTCTTAACTGTTGATTTTTTTTTTTTCATCTAGTGTGTATTGAGTAACCTTGCTGAGTTTGTTGCATCTGATACTTATTTATCTGTGTGCTATGTTGGTGTGTTTGGACGGGATAGGCCATGGAGAATCCAAAATGTTTCTTCGGTAAGACCTAGTTAACCTTGAATATGGTCATTCCTAATTTTCATTTTGGAATGTGTAAGATCTTGTTTGGTTTTATTTTTAATTATGGTAAAATTAGGATACCTTGAGATTTTGATTGTAGAGAGTTATGAAAACTTTGAATTTTTGGTATCAGAGGAAATGAAGTTTAGGATCACTTGCATTCTAGATTGGTTGTATGATATCTTGTCAATGTCATTGAATAAAAAAGGTTGAACTACTTTATGAAGTCTAGCAAATGTGCTCGTCCATAGCCAAAAAAAATCAAATAAAGGTTGCTTTCAACATTTAAACTATCATGCTTGACAAACGTTTGAATGGTAGCAAATGAATGGGGATTATGCAGATTTTTGTTGTTTTAATATCCAAATTTAAGTAGTGTTTGTATTAAATTGCTCTTTGTTTCTTGGGGAAACAATGAAGGCATTGCTGAAGATGGGTATTCGAGGTGTAACAGTATCCGATGTGAAGGGCTTTGGTTCTCAAGGTGGCTCTAAAGAGAGACATGGTGGTAAGTTTATCTTTGATGATTCTCGGTCTTAATTCTTGGTGAGGGAAATCTATTTGTACATTTTAGTCTGTTTCTAGACTCATGTCTTTTTCCATGTCATTACTGATGTTTGTTTATTTGCTGATGATTCCATTTAACTTTATACTCTTTTCTTTTATATACGGTTCATAGGATCTGAATTTTCTGAGGACAACTTTGTCACTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGACCAGGTAAAATAGTGTTATGCTATTGTGATAAGAAATTCACATTTGTTGTATATATCTCTTCAAATTTGTTGTTTATATCTCTTAAGCAAACTGCTGCACTAGAATCTATAGGTATTATGATTAAATTTAAGTATCCTTTTAACAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCCAGAACTGGTGAAATTGGTGACGGCAAAATTTTTGGTAAACATACTTTATTTTTGTTAATAGCCTAGCTCCTTATCTGCTTACATCGTTATGGTCTGCTTAACTTCTATTCTCTGAATTTTCTGCTTGTCATGCTGTTTATTATTTTTATATCTTTATTTCATTTTGTTTGATTTTCATTTATGCATTACCATGAACACAAGTTCTCTATGTTAACTGGATGAGCACCTTATATGGTAAATAATTATCAGCAACAAAATCATAGAAAATGGTAAGTATTTGTAATACAATGTTAGATAATTAAATTGTTTCTTAAGTGTAGTGATGAAGTCTCTTAGTTCTAGTCTAACAATATAAGAGTTGAAAAGCTGCATTACCAATTTGGAATGACTTTTTTAAGCACTTAAGAATTCGTTATCCATGGTGGCCACCTACATAGGAATTAATTTTCTTTGAGTCTACTTTAACACCCAAATGTTGTAGGGTCAGACAAGTTGTCCTATGAGATTAGTCGAGGTGCACATAAGTCGGTCCATCCGAACACTCACGAATACTGAAAGCACATACAAAACACCTTTTTTGTTTTTGTACTTCAAAACACTTTTATGGGAATGATATTAAGGTATCAATGGTGTCTTAACCTAAAATGGTTACTTGAATGGACAGATGAATGATGGGAATGATATTAAGGTGTTAGAGGGATATGAAGGGTGTATTAGTAATTATCTAGGAGAGTTGGTTATGGAGTTTGGTTATAATTATAGATAAGGAGAATAGGGAAGATAACTATTATTTTGGGCAATAAATTAGAGCTTGAGAGCATCTCAAGATTGGGAGAGTTCAACTACCTCAAACTTTTCGTTTATCTTGTATTTCTGTTATCTTTTATATTTTATATATTCAAGTTCTATCAACCTCATGTGAAATTGTTGGCTGAAAGGTGGTTTTAAATTTCCACTCTTACATAGCTGACTATCAGTTAATTTTTAATACAAAGCATAAGGACCAATAGAATTCATTATTTAATTTATCAAATTGTTGTAAACTTCTAACACACACTTTTGACTTTCACACAGTGATACCAATCTCAGACGTGATTCGAATTCGTACAGGTACCTTGTTAGCCTTTTTGAGCAACTATCAAAACTTCAACTAGCTTACTCAATGAAAGTTAAAAACATTAAGATTATTTCATTATCACATTGGTATATGACATGCCTTACATGTTGTGTAATGCACAGGCGAACGTGGAGAAAGAGCAGAGAGAATGACCGGAGGACGATCCGACATGTCTGACAACAATCGAGCAACACAGTAAGAAAGAGAAAATGTTGGTGAGTTTGTAACTTTTGTTCCATGGTGTTGGCGGCTACCTTCCTCAGAGTTTGGTCCTTGTGGAGATGAGGAAAATAAAAGAAATAGTAAGTTATAAGTTGTGTAATTCAGATAAGTTTATTTCTCTTGGAAACATCAGACTTGTAAATATGTAACTTCCTCATGTTGTCATAAAGAAATGAACCGCATTAGGCAATAATCAACGCATAAGCTACCATGCCATCTTCTAATGTACTTTTGATGATTAGATGGTGAATCCTAGGAGAGGAGTTGTCTTGTTCTTCAATATATTTACTTAGGACTTTGTTTAAAGTTTTGCATATGTGGTTGTATTTGATATAAAATCCTAACTTTCGTTTTCTTTTGAGTTCAATAATAACTCAAAACTGTGGTAGTGGGTCTATGTTCATTTACTTCATAGAGATGCATCTTTACATGGAGGATGATGAGGGAGCAGAGGGAATTTTCTCTCTATTGAATCGATGGAGACAAGAGAAACATGTATGATATAACATTTAATTTGTATTTTATGATACCATCTTGGGTCAACCTTGAGCTCAAGTTTGAAGACAAATTTAATATTATAACATTTAACATAAGTTATTATTCTTCATCTCCATTCCGATCCGGTTCACATCTTTATTTTTCAAAGGATGTAATATTGAGTC

mRNA sequence

CAAAAAAATGCAAAACAAACAAAACTTCTTCCAATCATAATTTATTAATTTTTTTGAAGCGGAAATTCCAACGTGAACTCTGAAACCTCCGATCAGTTCGTCGTCATCACTCTGCTTCTCGAATCTCAACTCTCATGGCGGTGGCGGCAACTACAACGAACCTCACTGCTCTTCTTCTTCCTCGTCCACAGTTTCATCACTTCACTTCTTTCTCTTTCATCACTCCTTACTTCACCACCGTCGGACTTTCTCACTTCAACCTCGCCAACAACCACCCTTCCAATCGCCAAATTCTCCCTCTCGTCAAAGCCACCCAAGGCTCTCTCGATTATGTGCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTTAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAGATGGGTATTCGAGGTGTAACAGTATCCGATGTGAAGGGCTTTGGTTCTCAAGGTGGCTCTAAAGAGAGACATGGTGGATCTGAATTTTCTGAGGACAACTTTGTCACTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGACCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCCAGAACTGGTGAAATTGGTGACGGCAAAATTTTTGTGATACCAATCTCAGACGTGATTCGAATTCGTACAGGCGAACGTGGAGAAAGAGCAGAGAGAATGACCGGAGGACGATCCGACATGTCTGACAACAATCGAGCAACACAGTAAGAAAGAGAAAATGTTGGTGAGTTTGTAACTTTTGTTCCATGGTGTTGGCGGCTACCTTCCTCAGAGTTTGGTCCTTGTGGAGATGAGGAAAATAAAAGAAATAGTAAGTTATAAGTTGTGTAATTCAGATAAGTTTATTTCTCTTGGAAACATCAGACTTGTAAATATGTAACTTCCTCATGTTGTCATAAAGAAATGAACCGCATTAGGCAATAATCAACGCATAAGCTACCATGCCATCTTCTAATGTACTTTTGATGATTAGATGGTGAATCCTAGGAGAGGAGTTGTCTTGTTCTTCAATATATTTACTTAGGACTTTGTTTAAAGTTTTGCATATGTGGTTGTATTTGATATAAAATCCTAACTTTCGTTTTCTTTTGAGTTCAATAATAACTCAAAACTGTGGTAGTGGGTCTATGTTCATTTACTTCATAGAGATGCATCTTTACATGGAGGATGATGAGGGAGCAGAGGGAATTTTCTCTCTATTGAATCGATGGAGACAAGAGAAACATGTATGATATAACATTTAATTTGTATTTTATGATACCATCTTGGGTCAACCTTGAGCTCAAGTTTGAAGACAAATTTAATATTATAACATTTAACATAAGTTATTATTCTTCATCTCCATTCCGATCCGGTTCACATCTTTATTTTTCAAAGGATGTAATATTGAGTC

Coding sequence (CDS)

ATGGCGGTGGCGGCAACTACAACGAACCTCACTGCTCTTCTTCTTCCTCGTCCACAGTTTCATCACTTCACTTCTTTCTCTTTCATCACTCCTTACTTCACCACCGTCGGACTTTCTCACTTCAACCTCGCCAACAACCACCCTTCCAATCGCCAAATTCTCCCTCTCGTCAAAGCCACCCAAGGCTCTCTCGATTATGTGCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTTAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAGATGGGTATTCGAGGTGTAACAGTATCCGATGTGAAGGGCTTTGGTTCTCAAGGTGGCTCTAAAGAGAGACATGGTGGATCTGAATTTTCTGAGGACAACTTTGTCACTAAAGTTAAGATGGAAATTGTGGTCGTTAAAGACCAGGTTGAAGCTGTCATAGACAAGATAATTGAGGAGGCCAGAACTGGTGAAATTGGTGACGGCAAAATTTTTGTGATACCAATCTCAGACGTGATTCGAATTCGTACAGGCGAACGTGGAGAAAGAGCAGAGAGAATGACCGGAGGACGATCCGACATGTCTGACAACAATCGAGCAACACAGTAA

Protein sequence

MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRSDMSDNNRATQ*

Homology

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BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot
Match: Q9ZST4 (Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-57
Identity = 116/151 (76.82%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 39  SHFNLANNHPSNR-QILPLVKATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIR 98
           S  +L    PSN  ++LP+V A Q S DY+PDSKFYKVEAI+RPWRIQ VSSALLK+GIR
Sbjct: 41  SCLDLVTKSPSNNSRVLPVVSA-QISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 100

Query: 99  GVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGE 158
           GVTVSDV+GFG+QGGS ERHGGSEFSED FV KVKMEIVV KDQVE+VI+ IIE ARTGE
Sbjct: 101 GVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGE 160

Query: 159 IGDGKIFVIPISDVIRIRTGERGERAERMTG 189
           IGDGKIFV+P+SDVIR+RTGERGE+AE+MTG
Sbjct: 161 IGDGKIFVLPVSDVIRVRTGERGEKAEKMTG 190

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BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot
Match: Q6AUR2 (Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GLB PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.0e-54
Identity = 117/185 (63.24%), Postives = 134/185 (72.43%), Query Frame = 0


Query: 21  HHFTSFSFITPYFTTVGLSHFNLAN-----------NHPSNRQILPLVKATQ--GSLDYV 80
           HH    S   P  TT   S   LA+           NH   R++ P     Q   +  Y 
Sbjct: 19  HHHPPASPRPPPTTTTTTSRLLLASRSRGLQRPLRVNHAPPRRLPPTAARAQSAAAAGYQ 78

Query: 81  PDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFSEDNF 140
           P+S+FYKVEAILRPWR+  VSS LL+MGIRGVTVSDV+GFG+QGGS ERH GSEF+ED F
Sbjct: 79  PESEFYKVEAILRPWRVPYVSSGLLQMGIRGVTVSDVRGFGAQGGSTERHEGSEFAEDTF 138

Query: 141 VTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMT 193
           + KVKMEIVV KDQVEAV+DKIIE+ARTGEIGDGKIF+IP+SDVIRIRTGERGERAERM 
Sbjct: 139 IDKVKMEIVVSKDQVEAVVDKIIEKARTGEIGDGKIFLIPVSDVIRIRTGERGERAERMA 198

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BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot
Match: O66513 (Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glnB PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 59/110 (53.64%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 74  KVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKM 133
           K+EAI++P+++  V  AL+++GI G+TV++VKGFG Q G  E + G+E+  D F+ KVK+
Sbjct: 3   KIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGFGQQKGHTEIYRGTEYVID-FLPKVKI 62

Query: 134 EIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERA 184
           E+VV  + VE V++ I++ A+TG +GDGKIF+IP+ DVIRIRTGERGE+A
Sbjct: 63  EVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQA 111

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BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot
Match: Q47894 (Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 62/110 (56.36%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 74  KVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKM 133
           KVEAI+RP+++  V  AL+  GI G+TVS+V+GFG Q G  ER+ GSE++ + F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKV 62

Query: 134 EIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERA 184
           EIVV  +QV+ V+DKII  ARTGEIGDGKIF+ P+  V+RIRTGE+   A
Sbjct: 63  EIVVEDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVVRIRTGEKNTEA 111

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BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot
Match: O30794 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=glnB PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 74  KVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKM 133
           KVEAI+RP+++  V  AL+  GI G+TVS+V+GFG Q G  ER+ GSE++ + F+ K+K+
Sbjct: 3   KVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVE-FLQKLKV 62

Query: 134 EIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERA 184
           EIVV  +QV+ V+DKII  ARTGEIGDGKIF+ P+  VIRIRTGE+   A
Sbjct: 63  EIVVDDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVIRIRTGEKNTEA 111

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BLAST of CsGy7G016840 vs. NCBI nr
Match: XP_011659409.1 (nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.1 hypothetical protein Csa_015915 [Cucumis sativus])

HSP 1 Score: 389 bits (998), Expect = 5.46e-136
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT 60
           MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT
Sbjct: 1   MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT 60

Query: 61  QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS 120
           QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS
Sbjct: 61  QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS 120

Query: 121 EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG 180
           EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG
Sbjct: 121 EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG 180

Query: 181 ERAERMTGGRSDMSDNNRATQ 201
           ERAERMTGGRSDMSDNNRATQ
Sbjct: 181 ERAERMTGGRSDMSDNNRATQ 201

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BLAST of CsGy7G016840 vs. NCBI nr
Match: XP_008461402.1 (PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis melo] >KAA0058540.1 nitrogen regulatory protein P-II-like protein [Cucumis melo var. makuwa] >TYJ96896.1 nitrogen regulatory protein P-II-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 373 bits (957), Expect = 1.01e-129
Identity = 196/202 (97.03%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MAVAATTTNLTALLLP-RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKA 60
           MAVAATTTNLT LLLP RPQFH FTSFSFITPYFT VGLSHFNLANNHPSNRQILPLVKA
Sbjct: 1   MAVAATTTNLTVLLLPPRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVKA 60

Query: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120
           TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG
Sbjct: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120

Query: 121 SEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180
           SEFSEDNFV KVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER
Sbjct: 121 SEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180

Query: 181 GERAERMTGGRSDMSDNNRATQ 201
           GERAERMTGGRSDMSDNNR TQ
Sbjct: 181 GERAERMTGGRSDMSDNNRVTQ 202

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BLAST of CsGy7G016840 vs. NCBI nr
Match: XP_038899657.1 (nitrogen regulatory protein P-II homolog [Benincasa hispida])

HSP 1 Score: 313 bits (803), Expect = 2.85e-106
Identity = 173/198 (87.37%), Postives = 176/198 (88.89%), Query Frame = 0


Query: 3   VAATTTNLTALLL----PRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62
           +AA TTN TALLL    P PQFHHFTS S IT   T V  SHF+LAN  PSNRQILPLVK
Sbjct: 1   MAAITTNPTALLLHFYSPLPQFHHFTSSSSITSSSTAVRFSHFHLANK-PSNRQILPLVK 60

Query: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122
           A QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGS ERHG
Sbjct: 61  AAQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHG 120

Query: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182
           GSEFSEDNFV KVKMEIVVVKDQVEAVI+KIIEEARTGEIGDGKIFVIPISDVIRIRTGE
Sbjct: 121 GSEFSEDNFVAKVKMEIVVVKDQVEAVINKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 180

Query: 183 RGERAERMTGGRSDMSDN 196
           RGERAERMTGGR DMS N
Sbjct: 181 RGERAERMTGGRYDMSVN 197

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BLAST of CsGy7G016840 vs. NCBI nr
Match: KAG6575740.1 (Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014290.1 Nitrogen regulatory protein P-II-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290 bits (742), Expect = 4.84e-97
Identity = 164/196 (83.67%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 3   VAATTTNLTALLLP----RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62
           +AAT TN TALLLP     P+  HF S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 1   MAATATNPTALLLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVK 60

Query: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120

Query: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180

Query: 183 RGERAERMTGGRSDMS 194
           RGERAERMTGGRSDM+
Sbjct: 181 RGERAERMTGGRSDMA 193

[Close]

BLAST of CsGy7G016840 vs. NCBI nr
Match: XP_022954086.1 (nitrogen regulatory protein P-II homolog [Cucurbita moschata])

HSP 1 Score: 288 bits (736), Expect = 3.96e-96
Identity = 163/196 (83.16%), Postives = 170/196 (86.73%), Query Frame = 0


Query: 3   VAATTTNLTALLLP----RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62
           +AAT T  TALLLP     P+  HF S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 1   MAATATKPTALLLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVK 60

Query: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120

Query: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180

Query: 183 RGERAERMTGGRSDMS 194
           RGERAERMTGGRSDM+
Sbjct: 181 RGERAERMTGGRSDMA 193

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BLAST of CsGy7G016840 vs. ExPASy TrEMBL
Match: A0A0A0K850 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 2.64e-136
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT 60
           MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT
Sbjct: 1   MAVAATTTNLTALLLPRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKAT 60

Query: 61  QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS 120
           QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS
Sbjct: 61  QGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGGS 120

Query: 121 EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG 180
           EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG
Sbjct: 121 EFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERG 180

Query: 181 ERAERMTGGRSDMSDNNRATQ 201
           ERAERMTGGRSDMSDNNRATQ
Sbjct: 181 ERAERMTGGRSDMSDNNRATQ 201

[Close]

BLAST of CsGy7G016840 vs. ExPASy TrEMBL
Match: A0A5A7UU45 (Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00060 PE=3 SV=1)

HSP 1 Score: 373 bits (957), Expect = 4.88e-130
Identity = 196/202 (97.03%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MAVAATTTNLTALLLP-RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKA 60
           MAVAATTTNLT LLLP RPQFH FTSFSFITPYFT VGLSHFNLANNHPSNRQILPLVKA
Sbjct: 1   MAVAATTTNLTVLLLPPRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVKA 60

Query: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120
           TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG
Sbjct: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120

Query: 121 SEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180
           SEFSEDNFV KVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER
Sbjct: 121 SEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180

Query: 181 GERAERMTGGRSDMSDNNRATQ 201
           GERAERMTGGRSDMSDNNR TQ
Sbjct: 181 GERAERMTGGRSDMSDNNRVTQ 202

[Close]

BLAST of CsGy7G016840 vs. ExPASy TrEMBL
Match: A0A1S3CEB3 (nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000 PE=3 SV=1)

HSP 1 Score: 373 bits (957), Expect = 4.88e-130
Identity = 196/202 (97.03%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MAVAATTTNLTALLLP-RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVKA 60
           MAVAATTTNLT LLLP RPQFH FTSFSFITPYFT VGLSHFNLANNHPSNRQILPLVKA
Sbjct: 1   MAVAATTTNLTVLLLPPRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLVKA 60

Query: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120
           TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG
Sbjct: 61  TQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHGG 120

Query: 121 SEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180
           SEFSEDNFV KVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER
Sbjct: 121 SEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGER 180

Query: 181 GERAERMTGGRSDMSDNNRATQ 201
           GERAERMTGGRSDMSDNNR TQ
Sbjct: 181 GERAERMTGGRSDMSDNNRVTQ 202

[Close]

BLAST of CsGy7G016840 vs. ExPASy TrEMBL
Match: A0A6J1GPW8 (nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111456457 PE=3 SV=1)

HSP 1 Score: 288 bits (736), Expect = 1.92e-96
Identity = 163/196 (83.16%), Postives = 170/196 (86.73%), Query Frame = 0


Query: 3   VAATTTNLTALLLP----RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62
           +AAT T  TALLLP     P+  HF S S ITP F  V  S FNLA   PSNR+ILPLVK
Sbjct: 1   MAATATKPTALLLPFPSPLPKLPHFASSSSITPNFA-VRFSQFNLAYK-PSNRRILPLVK 60

Query: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122
           A Q SLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 61  A-QASLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120

Query: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180

Query: 183 RGERAERMTGGRSDMS 194
           RGERAERMTGGRSDM+
Sbjct: 181 RGERAERMTGGRSDMA 193

[Close]

BLAST of CsGy7G016840 vs. ExPASy TrEMBL
Match: A0A6J1JMD1 (nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC111488188 PE=3 SV=1)

HSP 1 Score: 283 bits (723), Expect = 1.77e-94
Identity = 162/196 (82.65%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 3   VAATTTNLTALLLP----RPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLVK 62
           +AATTT  TALLLP     P+  HF S SF TP F  V  S FNL    PSNR+ILPLVK
Sbjct: 1   MAATTTKPTALLLPFPSPLPKLPHFASSSF-TPNFA-VRFSQFNLVYK-PSNRRILPLVK 60

Query: 63  ATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSKERHG 122
           A Q SLDYVPD KFYKVEAILRPWRIQNVSSALLKMGIRGVTVS+VKGFGSQGGS ERHG
Sbjct: 61  A-QASLDYVPDFKFYKVEAILRPWRIQNVSSALLKMGIRGVTVSEVKGFGSQGGSTERHG 120

Query: 123 GSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGE 182
           GSEFSEDNFV KVKMEIVVVK+QVEAVIDKIIEEARTGEIGDGKIFVIPISDVIR+RTGE
Sbjct: 121 GSEFSEDNFVAKVKMEIVVVKEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGE 180

Query: 183 RGERAERMTGGRSDMS 194
           RGERAERMTGGRSDM+
Sbjct: 181 RGERAERMTGGRSDMA 192

[Close]

BLAST of CsGy7G016840 vs. TAIR 10
Match: AT4G01900.1 (GLNB1 homolog )

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-58
Identity = 116/151 (76.82%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 39  SHFNLANNHPSNR-QILPLVKATQGSLDYVPDSKFYKVEAILRPWRIQNVSSALLKMGIR 98
           S  +L    PSN  ++LP+V A Q S DY+PDSKFYKVEAI+RPWRIQ VSSALLK+GIR
Sbjct: 41  SCLDLVTKSPSNNSRVLPVVSA-QISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 100

Query: 99  GVTVSDVKGFGSQGGSKERHGGSEFSEDNFVTKVKMEIVVVKDQVEAVIDKIIEEARTGE 158
           GVTVSDV+GFG+QGGS ERHGGSEFSED FV KVKMEIVV KDQVE+VI+ IIE ARTGE
Sbjct: 101 GVTVSDVRGFGAQGGSTERHGGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGE 160

Query: 159 IGDGKIFVIPISDVIRIRTGERGERAERMTG 189
           IGDGKIFV+P+SDVIR+RTGERGE+AE+MTG
Sbjct: 161 IGDGKIFVLPVSDVIRVRTGERGEKAEKMTG 190

The following BLAST results are available for this feature:

BLAST of CsGy7G016840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZST4	3.0e-57	76.82	Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1...	[more]
Q6AUR2	7.0e-54	63.24	Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=3994...	[more]
O66513	1.2e-26	53.64	Nitrogen regulatory protein P-II OS=Aquifex aeolicus (strain VF5) OX=224324 GN=g...	[more]
Q47894	1.6e-26	56.36	Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3...	[more]
O30794	1.6e-26	57.27	Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC ...	[more]

BLAST of CsGy7G016840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659409.1	5.46e-136	100.00	nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.1 hypotheti...	[more]
XP_008461402.1	1.01e-129	97.03	PREDICTED: nitrogen regulatory protein P-II homolog [Cucumis melo] >KAA0058540.1...	[more]
XP_038899657.1	2.85e-106	87.37	nitrogen regulatory protein P-II homolog [Benincasa hispida]	[more]
KAG6575740.1	4.84e-97	83.67	Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_022954086.1	3.96e-96	83.16	nitrogen regulatory protein P-II homolog [Cucurbita moschata]	[more]

BLAST of CsGy7G016840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K850	2.64e-136	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1	[more]
A0A5A7UU45	4.88e-130	97.03	Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CEB3	4.88e-130	97.03	nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000...	[more]
A0A6J1GPW8	1.92e-96	83.16	nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JMD1	1.77e-94	82.65	nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of CsGy7G016840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01900.1	2.1e-58	76.82	GLNB1 homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002187	Nitrogen regulatory protein PII	PRINTS	PR00340	PIIGLNB	coord: 124..147 score: 34.56 coord: 155..175 score: 64.89 coord: 94..112 score: 50.77 coord: 73..88 score: 34.19
IPR002187	Nitrogen regulatory protein PII	SMART	SM00938	P_II_3	coord: 75..177 e-value: 5.6E-44 score: 162.1
IPR002187	Nitrogen regulatory protein PII	PFAM	PF00543	P-II	coord: 75..177 e-value: 6.5E-34 score: 116.6
IPR002187	Nitrogen regulatory protein PII	PANTHER	PTHR30115	NITROGEN REGULATORY PROTEIN P-II	coord: 39..194
IPR002187	Nitrogen regulatory protein PII	PROSITE	PS51343	PII_GLNB_DOM	coord: 72..184 score: 35.749706
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 60..194 e-value: 9.1E-58 score: 196.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..201
None	No IPR available	PANTHER	PTHR30115:SF11	NITROGEN REGULATORY PROTEIN P-II HOMOLOG	coord: 39..194
IPR017918	Nitrogen regulatory protein PII, conserved site	PROSITE	PS00638	PII_GLNB_CTER	coord: 155..168
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 73..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G016840.2	CsGy7G016840.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0042304	regulation of fatty acid biosynthetic process
biological_process	GO:0006808	regulation of nitrogen utilization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
molecular_function	GO:0010307	acetylglutamate kinase regulator activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030234	enzyme regulator activity