CsGy7G016670 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G016670
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	beta-carotene isomerase D27, chloroplastic
Location	Gy14Chr7: 20199322 .. 20202824 (-)
RNA-Seq Expression	CsGy7G016670
Synteny	CsGy7G016670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCAACATTTATAACTTTTTTTAAAAAACTCTACTGATAAATTCAACATTTTTATCTTCAAATTTAAACCAAGTAGTGAAAGGAATTACACTGAATGGTTAATTCGTTGAAATGCATATCACCAAAAGTAAAATCCATTTTGGGCTATTATGAAAATGGTTCACAATTACAAAAATTGGATATTTGTTCCACCAAACAGTGTAGCTTTTCAGTTGTTCATGTGGAAGTGAAAATGAAGTCACTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTTGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGGTAAGATTTCAGTCTTCCCCTCTCCATTTCGGAACTCGTTCGACATGTAAATCAGCTTAATTCTGCTTCATCGTTGTCTTCATTGTCGTTGAATCCACAGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGTTGTTTTATTTCGAAAGTTCGAATTAGGTTTCGAAGCAAAATGCCATGGTTCAGGTTGTTTATATCTTTAATGAGTGATATCATGGCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTATTTCTTTTTCGAGATATATGCGTAGAGATAGAGCATCTAATTCTTTTATAACTTTGAACATCCGAGAGTGATTGAAAATTGTATTAGAGACTAGCCAGCTTCGTAGATTTCATTACGAAATTATGGTTATTGCTGCAGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGGTGAGTTAAGCCTTCAGCCTTTATCTGTATCTTCAAATCAGGTTAATTATAAAAAATTAACCAGTGGATACATAAAATTTATTGACCCGGGCTTCTTGTAACTTAGAAAAAAATAAAAATCTGGAAAAAAAAACTACATAAGTAAAACTTAACTCTAGTTGGAAGGAGGCAGACAAGCATAGTGTCTACAAATATTAAACATTGGTTTTGTTTATCCATATTATATAAAGACAGCCCCTGGACCTATACTAAATCTGCGGGTGCCTTGAACTATGTTTGAAACTGAGACATGGAATAGTGTAGTGACAACTTTAAACTGAGATTTGAATCACCATACAGTTCTAGGTCACCACCATAACATTTCAATCCTTGTTGACCGTCTAAAATTTAATTGATTTTTACTCTGTAGTTTTGAAATGTTTACGGGAGTTTAAGAGTACTATTGCAATTTTAGGATGTATAAGAATATTTTCGAAATAGATGGAAAAGTTTTTGGAGTATTCCTTATGTTTGAGCCCTGTAAATTATAATTTGGATCGAATTGTGTGTGATTATATAACAAATTCCATCAAAACTTAGATAAAACGTCGAAGAGTAGTACTATATTTGGGTGTTCAATTGGGAAGTAGATCCCTTGTTGCACTATAAAAAGTTTGGATTTGATTCCTTTTTAGTTGGACATCAGTTACTTTCGTTTGTTTGACTTATATCTGTCTGGTGTAAAATTTTGAATATTAGTTGAACTGCTCTGCTCCCTTTTTTCTTCTTCTATGTTAAAGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTATAAAATAAAATATTGATTTCTATATTCATGAATTTCAACCGAATAGTCAAAGCTTGTTTTTCACTTTGGTGCTCTTTTATGCAGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGGTTTGTTCTTAAAAATCTATATATCTTATCTCTTTCTTTACATTACTGGTTATTTGGGAACACCTTGTTCATTCGAGTGTCTTCTTTCTTCATACATTATTCATTTGTCTCGACTTGAACCAATCTCAACAATCTTGATTCTGATGTAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGGTAATTATTCTATTGCTTAGGTCAACATTTCTGTTGTACTAATGGATAACAATGTGGGTTGAAGTAGAACGTTTCCTGTTACATGATATCGTATCAGATTAATATGATGCATCTCTGTTTAAGCTTTTAACCAAACAATGTTGTTGACAGTCTGACATTTATAAGCTCTAATTTTATGAAGATTACATCAGTGTAATTTCGTATGAAATGGAATAAATTAAATCCATTAGTTGGTGACTTCTTTGGAAACTAGTGTATGCAACGTGTTGTCGCAGTATTTGATTTTGATCATATGGTGGCTGAATTTAACAGATTTGGGAGGGAAACATACGTTCCAGCTATAAACCACCTGTTTAGTGATACCCATCAGCACCTTACATGAATCTATAGATATTTCATTTCATTTTGCCTAAATTTATTTGAAAAATTCTTCTATTCTTTCCAAAATTATAGAATTACCATTGATCTTTCATAAACCTCCCAAAAGGGAAGAGTAGAGAATATACATAACTACCTTTTTGGTTTAACCTTTCCCTTTTCTTCCTCGTGTCGCAACTGAATTGACAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAGACCAACCGACCTTCAACTTGCTTGGGATCCTACTGAATTAGCTTAGCTACTTCGCTTCTGCTACAGCTGAATTCTCAAGGAAGCCTCTTGATTGCACCAACATATGTTTATTCTTGTTGCATTGTTGTGATTCATCCAAAGGTTATAGAGGAATAGTTACCCACAACTTGTATATATGATTCATTTCCCTCAATACTCTTCCACTTTGGAATAATAGCTAGAAAATTGTGCAAATCCTACTCCAAAAGAAAGAGTATATGTTATTACCCTCGAGTTATGCTCATGTTCACCCTAACAAAATTAGTTGGTTAAGTGCACAACTCCCAAGTTTCTAAAATTACCCTTCTTAAACCTTTCATTAGATTGTTTCTATCTATACTATTGGCCTAGTCACTTGGTTAGTCTTTCAATTTAGTTAAATCCTCTTTTGCACCATTTGTGCCCAGAATTTAGGGGTGGGATTGTAACAAACTACAAAATTGGAGAGGGCAATCATTGTTCGGGTATGATTTGGTCAAATTTTCAAAAATAAATCTTTATCATCAACTCAAGC

mRNA sequence

GATCAACATTTATAACTTTTTTTAAAAAACTCTACTGATAAATTCAACATTTTTATCTTCAAATTTAAACCAAGTAGTGAAAGGAATTACACTGAATGGTTAATTCGTTGAAATGCATATCACCAAAAGTAAAATCCATTTTGGGCTATTATGAAAATGGTTCACAATTACAAAAATTGGATATTTGTTCCACCAAACAGTGTAGCTTTTCAGTTGTTCATGTGGAAGTGAAAATGAAGTCACTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTTGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAGACCAACCGACCTTCAACTTGCTTGGGATCCTACTGAATTAGCTTAGCTACTTCGCTTCTGCTACAGCTGAATTCTCAAGGAAGCCTCTTGATTGCACCAACATATGTTTATTCTTGTTGCATTGTTGTGATTCATCCAAAGGTTATAGAGGAATAGTTACCCACAACTTGTATATATGATTCATTTCCCTCAATACTCTTCCACTTTGGAATAATAGCTAGAAAATTGTGCAAATCCTACTCCAAAAGAAAGAGTATATGTTATTACCCTCGAGTTATGCTCATGTTCACCCTAACAAAATTAGTTGGTTAAGTGCACAACTCCCAAGTTTCTAAAATTACCCTTCTTAAACCTTTCATTAGATTGTTTCTATCTATACTATTGGCCTAGTCACTTGGTTAGTCTTTCAATTTAGTTAAATCCTCTTTTGCACCATTTGTGCCCAGAATTTAGGGGTGGGATTGTAACAAACTACAAAATTGGAGAGGGCAATCATTGTTCGGGTATGATTTGGTCAAATTTTCAAAAATAAATCTTTATCATCAACTCAAGC

Coding sequence (CDS)

ATGGTTAATTCGTTGAAATGCATATCACCAAAAGTAAAATCCATTTTGGGCTATTATGAAAATGGTTCACAATTACAAAAATTGGATATTTGTTCCACCAAACAGTGTAGCTTTTCAGTTGTTCATGTGGAAGTGAAAATGAAGTCACTGGCTCTTCTTCTTCATCCACCAACCATCTCTCCAGCTCCTCTTTGCTTCACCTCCTCCAAATCCCACCTTCGAAATCGTCCCTTTATCCTCTCCTGTTCCGCACTTCAATCTGGATCGATAAAGGATGGGGCATCTTCGAAGGCTGAGTACAAGCCTGGAATTCTCGACGACTTCTTTCTCAACGTCTTCCGGAGCAAAATGGTTCAGGAGGTGGGCTGGGATTCTGAAAAACCTGGATATGATGGATTAATTGAAGTCGCTAGCAGGCTCACAATGACGGGCAAAACCAATTCTGAGACCATAGAAGCGTCGGTTCGGATTTTAATAGCTTTGTTTCCTCCTCTTCTGTTGAAACTTTATCGAATTTTGGTATCGCCTATAGCTGGTGGGAAAGTGGCTGCCATTATGGTCGCGAGGGTGACGGCGTTGACTTGTCAATGGCTTATGGGAACTTGCACAGTAAATTCAATTGAATTACCTGATGGATCGTCTTGCCAAAGTGGGGTCTTCGTTGAAAAGTGTAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATAAACACCTGCAAGCTTCCGACTCAGAGTTTCTTCAAGGATCAGATGGGAATCCCTCTATTAATGGAGCCAAACTTCACTGATTATAGTTGTCAGTTTAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATTCTCAAAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGGGAAGATAAGTGCAGCACAGTGTCCAAAAGCATAG

Protein sequence

MVNSLKCISPKVKSILGYYENGSQLQKLDICSTKQCSFSVVHVEVKMKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICPNATRRREVSGKISAAQCPKA*

Homology

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BLAST of CsGy7G016670 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 0


Query: 104 ILDDFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 163
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 164 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 223
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 224 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 283
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 284 PEEDSILKEPCLEIC 293
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

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BLAST of CsGy7G016670 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 76/227 (33.48%), Postives = 118/227 (51.98%), Query Frame = 0


Query: 73  LRNRP---FILSCSALQSGSIKDGASSKAE-YKPGILDDFFLNVFRSKMVQEVGWDSEKP 132
           LR +P   F++   A  +  I +    K   YK    D   +N     +    G  + K 
Sbjct: 22  LRLKPKHTFVVGVLARPTDDISEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISNNKS 81

Query: 133 GYDGLIEVASRLTMTGKTNSETIEASVRILIAL---FPPLLLKLYRILVSPIAGGKVAAI 192
           G+D L+E A   T+  +  + T +  + IL AL   FP  +L + R ++ P    K+A  
Sbjct: 82  GFDSLVEAA---TVASQKFNTTQQQGI-ILDALDRAFPKPILSVIRRVMPP---SKLARE 141

Query: 193 MVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQ 252
             A  T +   WL+G   V   E+ +G   ++ V ++KC++LEE+ C+G+CIN CK+P+Q
Sbjct: 142 YFAVFTTIFFAWLLGPSEVRESEI-NGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQ 201

Query: 253 SFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEIC 293
            F KD  G+P+ M PNF D SC+  FG  PP   +D  LK+PC ++C
Sbjct: 202 LFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLC 240

[Close]

BLAST of CsGy7G016670 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23
Identity = 61/192 (31.77%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 100 YKPGILDDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVA---SRLTMTGKTNSETIEASVR 159
           Y+    D   +      + +  G  +EK GY+ LI+ A   SR+    K +    +A  R
Sbjct: 80  YRDSWFDKLAIGYLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALER 139

Query: 160 ILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQ 219
            L    P  +L + ++++ P    + +    A  T +   WL+G C V   E+ +G   +
Sbjct: 140 AL----PSYILTMIKVMMPP---SRFSREYFAAFTTIFFPWLVGPCEVMESEV-EGRKEK 199

Query: 220 SGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPP 279
           + V++ KC++LE + C+G+C N CK+P Q F +D +G+ + M PNF D SC+  FG  P 
Sbjct: 200 NVVYIPKCRFLESTNCVGMCTNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQP- 259

Query: 280 LPEEDSILKEPC 289
            PE+D  LK+PC
Sbjct: 260 -PEDDPALKQPC 261

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BLAST of CsGy7G016670 vs. NCBI nr
Match: XP_004135988.2 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus])

HSP 1 Score: 617 bits (1592), Expect = 8.55e-223
Identity = 309/313 (98.72%), Postives = 310/313 (99.04%), Query Frame = 0


Query: 1   MVNSLKCISPKVKSILGYYENGSQLQKLDICSTKQCSFSVVHVEVKMKSLALLLHPPTIS 60
           MVNSLKCISPKVKSILGYYENGSQLQKLD CSTKQCSFSVVHVEVKMK +ALLLHPPTIS
Sbjct: 1   MVNSLKCISPKVKSILGYYENGSQLQKLDNCSTKQCSFSVVHVEVKMKPVALLLHPPTIS 60

Query: 61  PAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDDFFLNVFRSKMVQE 120
           PAPL FTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDDFFLNVFRSKMVQE
Sbjct: 61  PAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILDDFFLNVFRSKMVQE 120

Query: 121 VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRILVSPIAGG 180
           VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRILVSPIAGG
Sbjct: 121 VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLKLYRILVSPIAGG 180

Query: 181 KVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTC 240
           KVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTC
Sbjct: 181 KVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTC 240

Query: 241 KLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICPNATRRRE 300
           KLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICPNATRRRE
Sbjct: 241 KLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPCLEICPNATRRRE 300

Query: 301 VSGKISAAQCPKA 313
           VSGKISAAQCPKA
Sbjct: 301 VSGKISAAQCPKA 313

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BLAST of CsGy7G016670 vs. NCBI nr
Match: KGN45022.1 (hypothetical protein Csa_016689 [Cucumis sativus])

HSP 1 Score: 528 bits (1361), Expect = 2.51e-188
Identity = 264/267 (98.88%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK +ALLLHPPTISPAPL FTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGKISAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. NCBI nr
Match: XP_008451473.1 (PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 513 bits (1321), Expect = 3.13e-182
Identity = 256/267 (95.88%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK LALLLHPPTIS APL F SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. NCBI nr
Match: KAA0046701.1 (beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK18237.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa])

HSP 1 Score: 512 bits (1319), Expect = 6.32e-182
Identity = 255/267 (95.51%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK +ALLLHPPTIS APL F SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPMALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. NCBI nr
Match: XP_038898256.1 (beta-carotene isomerase D27, chloroplastic [Benincasa hispida])

HSP 1 Score: 473 bits (1218), Expect = 1.48e-166
Identity = 238/267 (89.14%), Postives = 246/267 (92.13%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK LALL  PPTIS APL FT SKSHLRN P  LSCSALQS SIK+  SSK EYKPG+LD
Sbjct: 1   MKPLALL-RPPTISSAPLRFTFSKSHLRNHPLNLSCSALQSESIKNETSSKPEYKPGLLD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           +FFLNVFRSKMVQEVGWDSEKPGYDGLIEVA+RLT  GKTNS+TIEASVRIL ALFPPLL
Sbjct: 61  EFFLNVFRSKMVQEVGWDSEKPGYDGLIEVANRLTTKGKTNSDTIEASVRILTALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           L LYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNS ELPDGSSCQSGVFVEKCKY
Sbjct: 121 LDLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSFELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKD+MGIPLLMEPNF DYSCQFKFGVLPPLPEED ILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDRMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDGILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRRE+SGK+SA QCPKA
Sbjct: 241 PCLEICPNATRRREISGKMSATQCPKA 266

[Close]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL
Match: A0A0A0K9J2 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=4 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 1.22e-188
Identity = 264/267 (98.88%), Postives = 265/267 (99.25%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK +ALLLHPPTISPAPL FTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGKISAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL
Match: A0A1S3BRJ4 (beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492751 PE=4 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 1.52e-182
Identity = 256/267 (95.88%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK LALLLHPPTIS APL F SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL
Match: A0A5D3D2R7 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001770 PE=4 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 3.06e-182
Identity = 255/267 (95.51%), Postives = 259/267 (97.00%), Query Frame = 0


Query: 47  MKSLALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 106
           MK +ALLLHPPTIS APL F SSKSHLRNRPFILSCSALQSGSIKDG SSK+EYKPGILD
Sbjct: 1   MKPMALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 107 DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 166
           DFFLNVFRSKMVQEVGWDSEKPGY GLIEVASRLTMTG+TNSETIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 167 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 226
           LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 227 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 286
           LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILKE
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 287 PCLEICPNATRRREVSGKISAAQCPKA 313
           PCLEICPNATRRREVSGK+SAAQCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL
Match: A0A6J1H551 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460668 PE=4 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 2.63e-160
Identity = 231/268 (86.19%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 47  MKSLALLLHPP-TISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGIL 106
           MK + LLLHPP TIS A L F SSKSHLR RP  +SC A+QS S K   SSK EYKPG+L
Sbjct: 1   MKPVVLLLHPPATISSAALRF-SSKSHLRKRPLNISCFAVQSESTKVEVSSKPEYKPGML 60

Query: 107 DDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 166
           DDFFLN+FRSKMVQEVGWDSEKPGYDGLIEVA+RLTM GK+NS+TIEASVRILIALFPPL
Sbjct: 61  DDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPL 120

Query: 167 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 226
           LL+LYR+LVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK
Sbjct: 121 LLELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180

Query: 227 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 286
           YLEESKCIGIC+NTCK PTQSFFK+QMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSILK
Sbjct: 181 YLEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILK 240

Query: 287 EPCLEICPNATRRREVSGKISAAQCPKA 313
           EPCLEICPNATRRREV  K+SA QCPKA
Sbjct: 241 EPCLEICPNATRRREVLNKMSATQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL
Match: A0A6J1KWU1 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497865 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 1.07e-159
Identity = 231/268 (86.19%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 47  MKSLALLLHPP-TISPAPLCFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGIL 106
           MK +ALLLHPP TIS A L F SSKSHLR RP   SC A+QS S K   SSK +YKPG+L
Sbjct: 1   MKPVALLLHPPATISSAALRF-SSKSHLRKRPLNFSCFAVQSESTKVEVSSKPDYKPGML 60

Query: 107 DDFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPL 166
           DDFFLN+FRSKMVQEVGWDSEKPGYDGLIEVA+RLTM GK+NS+TIEASVRILIALFPPL
Sbjct: 61  DDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPL 120

Query: 167 LLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 226
           LL+LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK
Sbjct: 121 LLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCK 180

Query: 227 YLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILK 286
           YLEESKCIGIC+NTCK PTQSFFK+QMGIPLLMEPNF DYSCQFKFGV PPLPEEDSILK
Sbjct: 181 YLEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVPPPLPEEDSILK 240

Query: 287 EPCLEICPNATRRREVSGKISAAQCPKA 313
           EPCLEICPNATRRREV  K+SA QCPKA
Sbjct: 241 EPCLEICPNATRRREVLSKMSATQCPKA 267

[Close]

BLAST of CsGy7G016670 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 302.0 bits (772), Expect = 5.7e-82
Identity = 157/265 (59.25%), Postives = 193/265 (72.83%), Query Frame = 0


Query: 50  LALLLHPPTISPAPLCFTSSKSHLRNRPFILSCSALQSGSIK-DGASSKAEYKPGILDDF 109
           + +LL PPT       F S+K  L  R   L C    S  +K D  + K EYKPG LDDF
Sbjct: 5   IQVLLPPPTTIVFSNSF-STKLILTRR---LRCRISNSSEVKSDEGAPKLEYKPGPLDDF 64

Query: 110 FLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLLLK 169
           F+  FR+K+V+EVG DSEKPGY GLIE+   L + G+T SET +A+VRIL +LFPPL+L+
Sbjct: 65  FMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILE 124

Query: 170 LYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLE 229
           LY++L++PIA GK+AA+MVARVT LTCQWLMG   VN I+LP+G S  SGVFVEKC+YLE
Sbjct: 125 LYKLLIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLE 184

Query: 230 ESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKEPC 289
           ESKC+G+CINTCKLPTQ+FFKD MG+PL+MEPNF DYSCQFKFGV P  PE+D  + EPC
Sbjct: 185 ESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPC 244

Query: 290 LEICPNATRRREVSGKISAAQCPKA 314
            E C  A RR     K+ + +CP A
Sbjct: 245 FETCSIAGRR-----KLKSGECPLA 258

[Close]

BLAST of CsGy7G016670 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 78/223 (34.98%), Postives = 124/223 (55.61%), Query Frame = 0


Query: 97  KAEYKPGILDDFFLNVFRSKM----------VQEVG-WDSEKPGYDGLIEVASRLTMTGK 156
           K  Y+ G+++  F+ +F  KM           +E G W+ +   Y+  +EV+ R+ M G+
Sbjct: 36  KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD---YESFVEVSKRV-MQGR 95

Query: 157 TNSETIEASVRILIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVN 216
           +  +  EA   +L+++ PP   + +R L  P    K AA   A +T     WL+G   V 
Sbjct: 96  SRVQQQEAVREVLLSMLPPGAPEQFRKLFPPT---KWAAEFNAALTVPFFHWLVGPSQVI 155

Query: 217 SIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDY 276
            +E+ +G   +SGV ++KC+YLE S C+G+C+N CK+PTQ FF ++ G+PL M PN+ D 
Sbjct: 156 EVEV-NGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDM 215

Query: 277 SCQFKFGVLPPLPEEDSILKEPCL-EICPNATRRREVSGKISA 308
           SC+  +G  PP  EED   K+PCL +IC  +     +  K+ A
Sbjct: 216 SCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSPICPKLEA 250

[Close]

BLAST of CsGy7G016670 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 66/195 (33.85%), Postives = 110/195 (56.41%), Query Frame = 0


Query: 104 ILDDFFLNV---FRSKMVQE---VGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRI 163
           I D FF  +   + SK +Q+   +   S+   YD L++ A+R++    T  +  E  +  
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQH-EFVLSS 124

Query: 164 LIALFPPLLLKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQS 223
           L    P ++  L ++   P    KV+  + A  T ++  WL+G   V   E+ +G   +S
Sbjct: 125 LDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRKEKS 184

Query: 224 GVFVEKCKYLEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPL 283
            V++EKC++LE+S C+G+C + CK+P+Q F K+ +G+P+ MEP+F D SC+  FG  PP 
Sbjct: 185 VVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPE 244

Query: 284 PEEDSILKEPCLEIC 293
            E+D  +K+PC E C
Sbjct: 245 IEDDPAMKQPCFEFC 254

The following BLAST results are available for this feature:

BLAST of CsGy7G016670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA78	1.9e-26	33.85	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]
R4HZ96	1.9e-26	33.48	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	1.5e-23	31.77	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CsGy7G016670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135988.2	8.55e-223	98.72	beta-carotene isomerase D27, chloroplastic [Cucumis sativus]	[more]
KGN45022.1	2.51e-188	98.88	hypothetical protein Csa_016689 [Cucumis sativus]	[more]
XP_008451473.1	3.13e-182	95.88	PREDICTED: beta-carotene isomerase D27, chloroplastic [Cucumis melo]	[more]
KAA0046701.1	6.32e-182	95.51	beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK18237.1 beta-carotene...	[more]
XP_038898256.1	1.48e-166	89.14	beta-carotene isomerase D27, chloroplastic [Benincasa hispida]	[more]

BLAST of CsGy7G016670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9J2	1.22e-188	98.88	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=...	[more]
A0A1S3BRJ4	1.52e-182	95.88	beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034927...	[more]
A0A5D3D2R7	3.06e-182	95.51	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1H551	2.63e-160	86.19	beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KWU1	1.07e-159	86.19	beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsGy7G016670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01995.1	5.7e-82	59.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.2e-31	34.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.1	1.4e-27	33.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 197..279 e-value: 6.9E-34 score: 115.7
None	No IPR available	PANTHER	PTHR33591:SF2	BETA-CAROTENE ISOMERASE D27	coord: 81..313
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 81..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G016670.2	CsGy7G016670.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016853	isomerase activity