CsGy7G015495 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G015495
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr7: 19424857 .. 19425207 (-)
RNA-Seq ExpressionCsGy7G015495
SyntenyCsGy7G015495
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTATTCGTTTCATTCCCTCTCTCGAATCTCAATCACTCAATTATACATTCACAATAATTCAAATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGTAACAGTTGGAAGCTGA

mRNA sequence

ATGGAAATTATTCGTTTCATTCCCTCTCTCGAATCTCAATCACTCAATTATACATTCACAATAATTCAAATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGTAACAGTTGGAAGCTGA

Coding sequence (CDS)

ATGGAAATTATTCGTTTCATTCCCTCTCTCGAATCTCAATCACTCAATTATACATTCACAATAATTCAAATGGAATCTCTCAACACAACCAGTGATATCATGATTCAGTATGAACCAATCTTCTTCTTCATATCAATCCCTTACCGAAATCCCCTTAAATTTTCATCTGTTTTCTTGACGGATTCAACAAACCCAACTCCTCAAGTTTTCGATTCATTTGTTGATTTTTACAGTGACTTCTTACACACTGCTCTTTCTTTAATCTTCAGATTCACGTTTTGCATCTCTATCCCATCTCCTTCATTCGTTGACATTCCTTCCCCCACCATTCTTGTAACAGTTGGAAGCTGA

Protein sequence

MEIIRFIPSLESQSLNYTFTIIQMESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHTALSLIFRFTFCISIPSPSFVDIPSPTILVTVGS*
Homology
[Close]
BLAST of CsGy7G015495 vs. NCBI nr
Match: KGN45446.2 (hypothetical protein Csa_016615 [Cucumis sativus])

HSP 1 Score: 224 bits (572), Expect = 8.36e-74
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MEIIRFIPSLESQSLNYTFTIIQMESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLT 60
           MEIIRFIPSLESQSLNYTFTIIQMESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLT
Sbjct: 1   MEIIRFIPSLESQSLNYTFTIIQMESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLT 60

Query: 61  DSTNPTPQVFDSFVDFYSDFLHTALSLIFRFTFCISIPSPSFVDIPSPTILVTVGS 116
           DSTNPTPQVFDSFVDFYSDFLHTALSLIFRFTFCISIPSPSFVDIPSPTILVTVGS
Sbjct: 61  DSTNPTPQVFDSFVDFYSDFLHTALSLIFRFTFCISIPSPSFVDIPSPTILVTVGS 116

[Close]
BLAST of CsGy7G015495 vs. ExPASy TrEMBL
Match: A0A0A0K587 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394590 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 2.71e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 24  MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 83
           MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT
Sbjct: 1   MESLNTTSDIMIQYEPIFFFISIPYRNPLKFSSVFLTDSTNPTPQVFDSFVDFYSDFLHT 60

Query: 84  ALSLIFRFTFCISIPSPSFVDIPSPTIL 111
           ALSLIFRFTFCISIPSPSFVDIPSPTIL
Sbjct: 61  ALSLIFRFTFCISIPSPSFVDIPSPTIL 88

The following BLAST results are available for this feature:
BLAST of CsGy7G015495 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy7G015495 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45446.28.36e-74100.00hypothetical protein Csa_016615 [Cucumis sativus][more]
BLAST of CsGy7G015495 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5872.71e-54100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394590 PE=4 SV=1[more]
BLAST of CsGy7G015495 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G015495.1CsGy7G015495.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding