CsGy7G015100 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G015100
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Histone H2A
Location	Gy14Chr7: 19077130 .. 19078064 (-)
RNA-Seq Expression	CsGy7G015100
Synteny	CsGy7G015100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCCAAACCATAATTGTTATCTTCTCTATAACGATCAACGAATCACTTCCTAATCTCAACCGGAAAGCTGAGATGAGTTCTGCTGAAGTTTCCACGAAGGGTGGCAGAGGCAAGAAAGCTTCCACCAAGTCTGTCTCCAGGTCTCACAAGGCTGGTCTCCAGTTCCCCGTCGGTCGTATCGCTAGGTACCTCAAGAAAGGTCGTTATGCTCAGCGTGTTGGCTCAGGCTCCCCGGTCTACCTCTCCGCCGTCCTTGAATACCTTGCTGCTGAGGTTTCTAATTGTTAACTTCACTTTGAGTGCAATTCTCTCAGTTTACAGTGTTCTGATTTAGGTCTTTTGTTTTTGTTTTAGGTTTTGGAGTTGGCGGGGAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGACACATCCAGCTTGCGGTGAGAAATGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTGATGCCGAAGATCCATCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAAAGCTGAAATTGGATCGGCGTCTCAGGAATTCTAGGTTATAGTAGAAATTGCCGTTGATGAATATAAAATCAAATAGGTAGTGAGGTTATGTTAGATTTTGTCATTAACTTCAATGAATGAGTTCATTCTTCTTTTCGTTTGTAAATTTTGCGAATCGAACTGTGCTTAGATTTGTATCTGTCATCATCGTCGTTCAAATTTTATGTTATTCAGTGTAAATGGCGATGAAGTTCAACATTAATTGGAATTGAAAGAAATTATTTGAATTATATTTTGTTGGATGTTACCTTTTCTCATCAATCAAACAAGAACTACGAGATTTGTCCTCGTTGAAATTCAAAATCTTAAATGGTATTTTACTTAATTGGCCCTATTGAGTTCATA

mRNA sequence

CTCGTCCAAACCATAATTGTTATCTTCTCTATAACGATCAACGAATCACTTCCTAATCTCAACCGGAAAGCTGAGATGAGTTCTGCTGAAGTTTCCACGAAGGGTGGCAGAGGCAAGAAAGCTTCCACCAAGTCTGTCTCCAGGTCTCACAAGGCTGGTCTCCAGTTCCCCGTCGGTCGTATCGCTAGGTACCTCAAGAAAGGTCGTTATGCTCAGCGTGTTGGCTCAGGCTCCCCGGTCTACCTCTCCGCCGTCCTTGAATACCTTGCTGCTGAGGTTTTGGAGTTGGCGGGGAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGACACATCCAGCTTGCGGTGAGAAATGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTGATGCCGAAGATCCATCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAAAGCTGAAATTGGATCGGCGTCTCAGGAATTCTAGGTTATAGTAGAAATTGCCGTTGATGAATATAAAATCAAATAGGTAGTGAGGTTATGTTAGATTTTGTCATTAACTTCAATGAATGAGTTCATTCTTCTTTTCGTTTGTAAATTTTGCGAATCGAACTGTGCTTAGATTTGTATCTGTCATCATCGTCGTTCAAATTTTATGTTATTCAGTGTAAATGGCGATGAAGTTCAACATTAATTGGAATTGAAAGAAATTATTTGAATTATATTTTGTTGGATGTTACCTTTTCTCATCAATCAAACAAGAACTACGAGATTTGTCCTCGTTGAAATTCAAAATCTTAAATGGTATTTTACTTAATTGGCCCTATTGAGTTCATA

Coding sequence (CDS)

ATGAGTTCTGCTGAAGTTTCCACGAAGGGTGGCAGAGGCAAGAAAGCTTCCACCAAGTCTGTCTCCAGGTCTCACAAGGCTGGTCTCCAGTTCCCCGTCGGTCGTATCGCTAGGTACCTCAAGAAAGGTCGTTATGCTCAGCGTGTTGGCTCAGGCTCCCCGGTCTACCTCTCCGCCGTCCTTGAATACCTTGCTGCTGAGGTTTTGGAGTTGGCGGGGAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGACACATCCAGCTTGCGGTGAGAAATGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTGATGCCGAAGATCCATCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAAAGCTGAAATTGGATCGGCGTCTCAGGAATTCTAG

Protein sequence

MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDKAEIGSASQEF*

Homology

[Close]

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot
Match: P35063 (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-56
Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS+    KGGRGK  STKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AV
Sbjct: 1   MSSS--GAKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRI+PRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ 
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQV 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 143
           LLPKK+G  KDK EIGSASQEF
Sbjct: 121 LLPKKSG--KDKGEIGSASQEF 138

[Close]

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot
Match: O65759 (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-56
Identity = 114/140 (81.43%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 3   SAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLE 62
           S+  +TKGGRGK  ++KSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLE
Sbjct: 2   SSTATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 61

Query: 63  YLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLL 122
           YLAAEVLELAGNAARDNK NRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LL
Sbjct: 62  YLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 121

Query: 123 PKKAGNAKDKAEIGSASQEF 143
           PKK G  K K EIGSASQEF
Sbjct: 122 PKKVG--KGKGEIGSASQEF 139

[Close]

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot
Match: A2ZL69 (Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.3e-56
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 10  GGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVL 69
           GGRGK   +KSVSRS KAGLQFPVGRIARYLK G+YA+RVG+G+PVYLSAVLEYLAAEVL
Sbjct: 8   GGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVL 67

Query: 70  ELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNA 129
           ELAGNAARDNKKNRI+PRHIQLAVRNDEELS+LLG+VTIA+GGV+P IHQ+LLPKK G  
Sbjct: 68  ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG-- 127

Query: 130 KDKAEIGSASQEF 143
           KDKA+IGSASQEF
Sbjct: 128 KDKADIGSASQEF 138

[Close]

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot
Match: Q2QPG9 (Probable histone H2AXb OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0530000 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.3e-56
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 10  GGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVL 69
           GGRGK   +KSVSRS KAGLQFPVGRIARYLK G+YA+RVG+G+PVYLSAVLEYLAAEVL
Sbjct: 8   GGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVL 67

Query: 70  ELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNA 129
           ELAGNAARDNKKNRI+PRHIQLAVRNDEELS+LLG+VTIA+GGV+P IHQ+LLPKK G  
Sbjct: 68  ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG-- 127

Query: 130 KDKAEIGSASQEF 143
           KDKA+IGSASQEF
Sbjct: 128 KDKADIGSASQEF 138

[Close]

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot
Match: O04848 (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-55
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 7   STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 66
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 67  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 126
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 127 GNAKDKAEIGSASQEF 143
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. NCBI nr
Match: XP_004148882.1 (histone H2AX [Cucumis sativus] >KGN44845.1 hypothetical protein Csa_016006 [Cucumis sativus])

HSP 1 Score: 269 bits (687), Expect = 1.66e-90
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS EVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. NCBI nr
Match: XP_008451416.1 (PREDICTED: histone H2AX-like [Cucumis melo])

HSP 1 Score: 268 bits (684), Expect = 4.77e-90
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS EVSTKGGRG+KASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGRKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. NCBI nr
Match: XP_038896926.1 (histone H2AX-like [Benincasa hispida])

HSP 1 Score: 262 bits (669), Expect = 9.26e-88
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS ++  KGGRG+KASTKSVSRSHKAGLQFPVGR+ARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDIPAKGGRGRKASTKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. NCBI nr
Match: XP_022953582.1 (histone H2AX-like [Cucurbita moschata])

HSP 1 Score: 260 bits (665), Expect = 5.29e-87
Identity = 136/142 (95.77%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS +V TKGGRGKK+  KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 11  MSSNDVPTKGGRGKKSDAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 70

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 71  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 130

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 131 LLPKKAGNAKDKAEIGSASQEF 152

[Close]

BLAST of CsGy7G015100 vs. NCBI nr
Match: KAG6575875.1 (Histone H2AX, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 259 bits (663), Expect = 7.61e-87
Identity = 135/142 (95.07%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS +V TKGGRGKK++ KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPTKGGRGKKSAAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAK+KAEIGSASQEF
Sbjct: 121 LLPKKAGNAKNKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL
Match: A0A0A0K525 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_7G390240 PE=3 SV=1)

HSP 1 Score: 269 bits (687), Expect = 8.06e-91
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS EVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL
Match: A0A1S3BRH7 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492716 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 2.31e-90
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS EVSTKGGRG+KASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGRKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL
Match: A0A6J1GNM4 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111456076 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 2.56e-87
Identity = 136/142 (95.77%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS +V TKGGRGKK+  KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 11  MSSNDVPTKGGRGKKSDAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 70

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 71  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 130

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 131 LLPKKAGNAKDKAEIGSASQEF 152

[Close]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL
Match: A0A6J1L0A1 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111497905 PE=3 SV=1)

HSP 1 Score: 251 bits (640), Expect = 1.18e-83
Identity = 129/142 (90.85%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS +V  K GRGKK++TKSV+RSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPAKAGRGKKSATKSVTRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIASGGV+PKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAG+ KDKAEIGSASQEF
Sbjct: 121 LLPKKAGSTKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL
Match: A0A6J1HB52 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111461202 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 3.39e-83
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MSSAEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS +V  KGGRGKK++ KSV+RSHKAGLQFPVGRIARYLKKGR+AQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPAKGGRGKKSAAKSVTRSHKAGLQFPVGRIARYLKKGRFAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIASGGV+PKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQS 120

Query: 121 LLPKKAGNAKDKAEIGSASQEF 142
           LLPKKAG+ KDKAEIGSASQEF
Sbjct: 121 LLPKKAGSTKDKAEIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. TAIR 10
Match: AT1G08880.1 (Histone superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.1e-56
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 7   STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 66
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 67  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 126
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 127 GNAKDKAEIGSASQEF 143
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. TAIR 10
Match: AT1G54690.1 (gamma histone variant H2AX )

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 7   STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 66
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 67  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 126
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 127 GNAKDKAEIGSASQEF 143
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of CsGy7G015100 vs. TAIR 10
Match: AT4G27230.1 (histone H2A 2 )

HSP 1 Score: 191.0 bits (484), Expect = 6.4e-49
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 11  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK+    A+ KS SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

Query: 131 GNAKDKAE 135
           G++K   E
Sbjct: 123 GSSKPTEE 130

[Close]

BLAST of CsGy7G015100 vs. TAIR 10
Match: AT4G27230.2 (histone H2A 2 )

HSP 1 Score: 191.0 bits (484), Expect = 6.4e-49
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 11  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK+    A+ KS SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

Query: 131 GNAKDKAE 135
           G++K   E
Sbjct: 123 GSSKPTEE 130

[Close]

BLAST of CsGy7G015100 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 )

HSP 1 Score: 188.7 bits (478), Expect = 3.2e-48
Identity = 98/128 (76.56%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 11  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 70
           GRGK     ++ K+ +RS KAGLQFPVGRIAR+LKKG+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 71  EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 130
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

Query: 131 GNAKDKAE 135
           G +K  AE
Sbjct: 123 GASKPSAE 130

The following BLAST results are available for this feature:

BLAST of CsGy7G015100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35063	3.1e-56	82.39	Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1	[more]
O65759	4.0e-56	81.43	Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1	[more]
A2ZL69	5.3e-56	84.21	Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3...	[more]
Q2QPG9	5.3e-56	84.21	Probable histone H2AXb OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0530000 ...	[more]
O04848	1.5e-55	82.35	Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1	[more]

BLAST of CsGy7G015100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148882.1	1.66e-90	99.30	histone H2AX [Cucumis sativus] >KGN44845.1 hypothetical protein Csa_016006 [Cucu...	[more]
XP_008451416.1	4.77e-90	98.59	PREDICTED: histone H2AX-like [Cucumis melo]	[more]
XP_038896926.1	9.26e-88	95.07	histone H2AX-like [Benincasa hispida]	[more]
XP_022953582.1	5.29e-87	95.77	histone H2AX-like [Cucurbita moschata]	[more]
KAG6575875.1	7.61e-87	95.07	Histone H2AX, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsGy7G015100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K525	8.06e-91	99.30	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_7G390240 PE=3 SV=1	[more]
A0A1S3BRH7	2.31e-90	98.59	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492716 PE=3 SV=1	[more]
A0A6J1GNM4	2.56e-87	95.77	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111456076 PE=3 SV=1	[more]
A0A6J1L0A1	1.18e-83	90.85	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111497905 PE=3 SV=1	[more]
A0A6J1HB52	3.39e-83	90.14	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111461202 PE=3 SV=1	[more]

BLAST of CsGy7G015100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08880.1	1.1e-56	82.35	Histone superfamily protein	[more]
AT1G54690.1	1.4e-56	82.35	gamma histone variant H2AX	[more]
AT4G27230.1	6.4e-49	78.13	histone H2A 2	[more]
AT4G27230.2	6.4e-49	78.13	histone H2A 2	[more]
AT1G51060.1	3.2e-48	76.56	histone H2A 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 77..91 score: 78.03 coord: 63..76 score: 89.46 coord: 48..63 score: 75.0 coord: 19..41 score: 69.65 coord: 105..123 score: 63.11
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 8..128 e-value: 3.8E-77 score: 272.3
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 13..125 e-value: 6.37246E-68 score: 199.098
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 6..134 e-value: 2.4E-64 score: 217.0
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..125
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 8..94 e-value: 1.2E-15 score: 58.0
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 97..130 e-value: 7.8E-18 score: 63.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 6..140
None	No IPR available	PANTHER	PTHR23430:SF207	HISTONE H2A	coord: 6..140
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 27..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G015100.2	CsGy7G015100.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity