CsGy7G014470 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G014470
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptiontranscription factor E2FB isoform X1
LocationGy14Chr7: 18507569 .. 18512454 (-)
RNA-Seq ExpressionCsGy7G014470
SyntenyCsGy7G014470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACTATCTCTTGAACCACTCCTCCGGTTTTTCACCTTCATATTTAGGCTAAAACCCCAAAACTCCCTCCAGTTTTCCCTCTCTTTCTCTGATCTTCATAACCCATATTCCCAATCACTCCATCTTCGCTTCCTCTTCTCTTCTGCCTTGCTCTATGTCGAGTTCTCGACCTCCTAACTCCTCTGGACACCTTCCTCATCAGATCACGCACTCTCTTAAACGCCAACTCCCTTTATCTTCTATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCTCCCGACTCTCGACTCGCCGATCAAGAACCTGATGCTATCGTACTCAAATCTCCAGTGAGTTTGTTTTTCTTGTTTTTATTTTACATGCATATTTCGTTCATTACTTGTGTTTCGATAACTCATTTGGTTCTTTTGGTCATTGGGTATGTTGATCAGCTGCAATGTACAGTTGTTCATTTTAGTCTTTATGCACTCGAAGAATTACCATTGTTAACCAATATTAGTGGTTGCCAAGCTGGAAGATACCCCCAATTTTTCCTATAGATAGGCAAGACGAGTTGATAGCCACAATGTTAGAACCTTGATGCAAATAGATGACACTCGGTGAGATTGATTTTGTGAGTTGTGAGTACTTTTCTAGGAATAATATGTTCAATCAGTGGTGAAGAATGTTCTTCTTCAACGGTAAGTTCTCAATTATGATTATAGTACTTTACCGATTCTGGATACTAATAAATGATGAAGATAACTACCTCAAAGGATAAGATCATAATGGTGTTAGCTGACTTGATCAAGTCGTGCAGTCTTATTTTGAGTTGATATTGTCTATCTTGGATATGGACATCACTTAAATTATTGTGGTTCAGTAGTAAAAAGAGCCAGCAAGAAAGACATCCCATTTCATTGGTTGTAGGTGCTCATTCAATTCTTCAAAGGGCAGCATCTCCTGATCATCCTTGGTCAATAATTTTTGTATCGTTAGGCTATTATCATATGTTATGTAAGATTCTTCTGAGAACTTGATTGAATTGCTTTTGTGCATGGTTTGAATAACACAGGCTCTAGTACTCATTATGGTGTACTGTATAGTTTCAAGAGTATCCTGTTAAATTCTAGACATTTGTGGAATGCCTGGGATGTGAATCATTTGAATAGCTGAATGTCTCAAACTATTACACTCTAATAAAAAAAAAGTATGAGTGATATTTTATTTTTATTTATTTGTTTATACTAAATTATGTTTTTTCATTTGAGGTTTTTGCTACTGTCTAAAATGTGGAAAAAGATGAATCACCTTCTATATTCACTCAACAGCAACAGAATAATTGAGTTAATGAAAACATAACAGAGGATTTTTCTATGAGAACTGAACTGTCGAGCACTGCCTAATAATTTGTTTATATCTTCAAATATGATGTTTATGTTTTATCATTTCTCCTCTATTTACTCTTCTCTTGTTTCTTCCCCTTCTTTCCCTTTATGTCTGGGGATGTTCGCTCTTAAAACTTTTGAATCTGAAGAATGTTTAGAGGTTGTTTGGAAATTGTTCTAAATGTAATCTTTTTTTATTGTTTCTAAAATAATTTTTTTAAAACATATTAATTCTAGATAACTGCTTTAGAAGGATTTTTTTGGTCTTCTTTTTAGTGTTCCAAATGATCCATTCCATTAAAAAGATATTTGTTCAAAATCATGAATTTATTAGTAATGATTTGTTGCATCACTTTTGCTAGTCCCTCAATCACAGTTGTCAATATGATAGTTTTGAAAACTAAATGAGAAAACTTTTATCAAGATAGTTTTCCAAACCACCCTATAGCCCTTGAGAAGGATGTTTTAACTTTGATATTTGCTTGTAGAATATGCACTCTTTAAAGATCTTATTCGCAAATATACCCTTGTTTTCCTATGCGATGATGGCAATTCAATTTTTATGAACAATTGAACATGTCATTTTACCTAATTTAACCTTAATAGAAAACTAGATAAGTAGTAGCACTAACAGGCTTAATAGCAATCATGGGAATCTTTAAGTATTTGTGGTTGTTGTACATTGGGTAGTTTTGATGTTGTGGTACTTTAGGGCATTTATAAAAAATTCTTATGTGGGAAGGTTGGTCGAGTGAAAATTCCCGTTGGTGGAGTATTTGCATTTCTCAACCCTGATCCTTCTCATTTATTAGTTTTTACATTTAAAAAAAGGGGTAGTCTCAGCGTTAATCAAATTAATAACTCTTGAGCTCAGCGACAAATGATCCTCCCATACATTGTTAAAGATTTTATTGTTTATTGATCATCCATTCAGAGACAAGTCTAGAAGATCTTTTCTGCCCACGCTTTCTTAGCAACTCTTTGGAGGTTTGGGAGGGGGGATTCTTAAGGTTAAAATAGGTCTTTCTGGGTCTTTTGGATTTCATTTGTTTTGAGAGCTTCCTTTTGGACTACTAAAACTAAAACCTTTAGTAAATGGTTTGTTCCCTTGAGTTACGCCAGTTTATGAATGCTTTTACCAAATCTTTGAATGTTATTTGTTTGAAAGGCTTTCTTTGGCTTTGGTTGGGAGGATTTGATGTAACTTACGAAGAACATGGACGATTGGTTCTTAAAGCTTGGAAGCAGTTATAAAGCTCAAGATTATTAACAAAGTTGTGCAGCTGCTCGATAATCCCACATGCTTTGGGTTCCATGGATGTAACAGATGTTTTTCATCTTTTTAGATGATTTGCTAGGTGGGAATTACTCTAGGCTAAACAGACAACAATTTGTATCTGAGAAGCCTCCATTAGATATTAATAAAGCAACTGAGATCGTAAATGTATTACAGGATAAAATTTTCTAGACTTATAGTCTGCGTGGTGGTGGTAGGTGCTGTATTTTTTTTTTCCCTTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTGGTCTCTAAAGTAATAAGTGAAATTATTTCTTTACCCAGTTTGTATGGCACTATATTTTGTTTCTTATTAGACCTCTATAGTAATAATCGTTTTCTTACTTTACGTATCAATACAGTATTAGGTGCTTATGTTACTATGTTTGTTTTGGTAATCTTGGATCCTGTCTATCAGCAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCCGAGTCAACTGATAGAGCAATTGGTCCTAGATTCGTGAGGTAGTTAACCGTCCCCATCAAACACCTGTATCTGTCAAAGGAGGAAAGGGAGGCAAATCAAGGCTTACAAAATACAGTAGATCAGGGCCACAGACTCCCATTTCAAATGTTGGTAAGTTGTACATCATACATGCTGGTCCCCTTGGTTTCATGTTAAAAACTCTATGTAAAATACCTTCTTCAATTTTTGTTTCTGAGTGAATGAGTAAGGTGAAGCTCCTTTGCTAAAGAAATTGCATTATTTGTCATTTAGACAAAAAATTTGACTTCTTCCACTCTTTCATTCACAAAGCTATTTCATTCACGAGAAAATGTTTAAGTTTCAGGTTCATCTTCTACAAACAATCTCACTCCAGCTGGTCCATGCCGTTACGATAGTTCTCTTAGTAGCTTGTTACTCCTGAAGACTTTGTTGTAGCTGTCATATATTTCCTACTATTGTATGTTCCTAATTTTAGTGATTTTCGTCTAGGTTTCTTGACAAAGAAGTTCATTAATCTGATTAAACAAGCAGAAGATGGTATTCTTGATCTAAATAAAGCAGCTGACACGTTGGAGGTTTCTGTGTTTCTAGAACATTACAGACCTCCATTGTGAAGTTCAAGAAGCTGACATTTATTTTTGCTTTAATAGGTACAAAAAAGACGAATATATGATATAACAAATGCCCTCAAGGGAATTGTTCTCACAGGAAAGAAGCTTAAGAACAGAATTCAGTGGAAGTATGTATCATGCCATAAATTTTTTTTTGGACTTCCATGGAATAATATTAATTAGCATCGCCTTTTTTATAGACTCCCTATCATGCACTAGTAGAAGGAAGAAGGGAATAATTGAAGCACGTGCTAAAGAAGAGAGTTAGTTAGTCTGTTAGTTAAAGAGGCAGTTAATATTGTTAGTATATTGTTAGTATAAATAAATGATATGTTAGGAGGGATAGGCTTCTGTGCACCTTTGAGAGATAAGGTAATAGAGGAGTAGTGGTATCCGAATTGAGATCTTCTCAATTTGACAGTTTCATTCTATTGTTTGTAAGAGATTGTTACTTAATACTATCAATAAAGCATTACCAATGAATCCAAGTTCGGGTCCCATCATATTGGTATTAGAGCTTGTTCATTCTAGGCAAACTATGTAAGATGGTGAAACAAGTGAAAGAGAGGTTTAAAATCATAGAACAAGAAATCTCGAGCATGAAGATCGGCAACAGCTATCGGAACTCGAAACCAAGGTGACGGAACATATGGAGAAGATCGATTTTAGAATGAAAAGAATATACAACAACAACTGATTCTGAAATATATTGAAAGTATGATGAAAGAGCAATCTCCATCGACACCAAAATCGGAAGGATCAACGAGTAAAATGAAAGCGAAGATGTTCGAGTTAAGCGAAGAACCGAAATTGAACGATAAAGAGGATGGCGAGAAGAACAATGGCCGGAATAAATTCAAGAAGGTAGAAATGTCGGTATTCAATGGCGAAGACCCGAATTCCTGGTTGTTTCATGCTGATAGATATTTCCATATTCACAAACCAAATTCTTGGACCGACGTTGAACTAGTTTAGAGCATAGGAAGAGCCGGAAAATTTCACAGGTTGGTCGAATTTAAAAGAAAGATTGCTGGTGTGATTTCGATCGGTGAGAGAAGGCTTTATATGCTGTCAATTTTTTAGAATCATGCAAGAAACTACAG

mRNA sequence

ACACTATCTCTTGAACCACTCCTCCGGTTTTTCACCTTCATATTTAGGCTAAAACCCCAAAACTCCCTCCAGTTTTCCCTCTCTTTCTCTGATCTTCATAACCCATATTCCCAATCACTCCATCTTCGCTTCCTCTTCTCTTCTGCCTTGCTCTATGTCGAGTTCTCGACCTCCTAACTCCTCTGGACACCTTCCTCATCAGATCACGCACTCTCTTAAACGCCAACTCCCTTTATCTTCTATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCTCCCGACTCTCGACTCGCCGATCAAGAACCTGATGCTATCGTACTCAAATCTCCACAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCCGAGTCAACTGATAGAGCAATTGGTCCTAGATTCGTGAGGTAGTTAACCGTCCCCATCAAACACCTGTATCTGTCAAAGGAGGAAAGGGAGGCAAATCAAGGCTTACAAAATACAGTAGATCAGGGCCACAGACTCCCATTTCAAATGTTGGTAAGTTGTACATCATACATGCTGGTCCCCTTGGTTTCATGTTAAAAACTCTATGTAAAATACCTTCTTCAATTTTTGTTTCTGAGTGAATGAGTAAGGTGAAGCTCCTTTGCTAAAGAAATTGCATTATTTGTCATTTAGACAAAAAATTTGACTTCTTCCACTCTTTCATTCACAAAGCTATTTCATTCACGAGAAAATGTTTAAGTTTCAGGTTCATCTTCTACAAACAATCTCACTCCAGCTGGTCCATGCCGTTACGATAGTTCTCTTAGTAGCTTGTTACTCCTGAAGACTTTGTTGTAGCTGTCATATATTTCCTACTATTGTATGTTCCTAATTTTAGTGATTTTCGTCTAGGTTTCTTGACAAAGAAGTTCATTAATCTGATTAAACAAGCAGAAGATGGTATTCTTGATCTAAATAAAGCAGCTGACACGTTGGAGGTTTCTGTGTTTCTAGAACATTACAGACCTCCATTGTGAAGTTCAAGAAGCTGACATTTATTTTTGCTTTAATAGGTACAAAAAAGACGAATATATGATATAACAAATGCCCTCAAGGGAATTGTTCTCACAGGAAAGAAGCTTAAGAACAGAATTCAGTGGAAACTCCCTATCATGCACTAGTAGAAGGAAGAAGGGAATAATTGAAGCACGTGCTAAAGAAGAGAGTTAGTTAGTCTGTTAGTTAAAGAGGCAGTTAATATTGTTAGTATATTGTTAGTATAAATAAATGATATGTTAGGAGGGATAGGCTTCTGTGCACCTTTGAGAGATAAGGTAATAGAGGAGTAGTGGTATCCGAATTGAGATCTTCTCAATTTGACAGTTTCATTCTATTGTTTGTAAGAGATTGTTACTTAATACTATCAATAAAGCATTACCAATGAATCCAAGTTCGGGTCCCATCATATTGGTATTAGAGCTTGTTCATTCTAGGCAAACTATGTAAGATGGTGAAACAAGTGAAAGAGAGGTTTAAAATCATAGAACAAGAAATCTCGAGCATGAAGATCGGCAACAGCTATCGGAACTCGAAACCAAGGTGACGGAACATATGGAGAAGATCGATTTTAGAATGAAAAGAATATACAACAACAACTGATTCTGAAATATATTGAAAGTATGATGAAAGAGCAATCTCCATCGACACCAAAATCGGAAGGATCAACGAGTAAAATGAAAGCGAAGATGTTCGAGTTAAGCGAAGAACCGAAATTGAACGATAAAGAGGATGGCGAGAAGAACAATGGCCGGAATAAATTCAAGAAGGTAGAAATGTCGGTATTCAATGGCGAAGACCCGAATTCCTGGTTGTTTCATGCTGATAGATATTTCCATATTCACAAACCAAATTCTTGGACCGACGTTGAACTAGTTTAGAGCATAGGAAGAGCCGGAAAATTTCACAGGTTGGTCGAATTTAAAAGAAAGATTGCTGGTGTGATTTCGATCGGTGAGAGAAGGCTTTATATGCTGTCAATTTTTTAGAATCATGCAAGAAACTACAG

Coding sequence (CDS)

ATGTCGAGTTCTCGACCTCCTAACTCCTCTGGACACCTTCCTCATCAGATCACGCACTCTCTTAAACGCCAACTCCCTTTATCTTCTATGAAACCACCATTTGCATCTCCTGGGGACTATCACCGCTTCGCTCCCGACTCTCGACTCGCCGATCAAGAACCTGATGCTATCGTACTCAAATCTCCACAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCCGAGTCAACTGATAGAGCAATTGGTCCTAGATTCGTGAGGTAG

Protein sequence

MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLKSPQLKRKSEVADYEAESTDRAIGPRFVR*
Homology
[Close]
BLAST of CsGy7G014470 vs. ExPASy Swiss-Prot
Match: Q9FV71 (Transcription factor E2FB OS=Arabidopsis thaliana OX=3702 GN=E2FB PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 10 SGHLPHQITHSLKRQL--PLSSMKPPFASPGDYHRF-APDSR----LADQ-EPDAIVLKS 69
          S  +P Q   S KRQL   LSSMKPP  +PG+YHRF A ++R    +ADQ   DAIV+KS
Sbjct: 2  SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70 PQLKRKSEVADYEAESTDRAIG 84
            LKRK+++ +   E  +   G
Sbjct: 62 -TLKRKTDLVNQIVEVNELNTG 81

[Close]
BLAST of CsGy7G014470 vs. NCBI nr
Match: KGN44775.1 (hypothetical protein Csa_016105 [Cucumis sativus])

HSP 1 Score: 180 bits (456), Expect = 5.39e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK
Sbjct: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88
          SPQLKRKSEVADYEAESTDRAIGPRFVR
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88

[Close]
BLAST of CsGy7G014470 vs. NCBI nr
Match: KAA0061728.1 (transcription factor E2FB isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (409), Expect = 1.37e-45
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. NCBI nr
Match: XP_008449589.1 (PREDICTED: transcription factor E2FB isoform X2 [Cucumis melo])

HSP 1 Score: 162 bits (409), Expect = 1.53e-45
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. NCBI nr
Match: XP_008449588.1 (PREDICTED: transcription factor E2FB isoform X1 [Cucumis melo])

HSP 1 Score: 162 bits (409), Expect = 1.58e-45
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. NCBI nr
Match: XP_004140164.2 (transcription factor E2FB isoform X2 [Cucumis sativus] >KGN48315.2 hypothetical protein Csa_002976 [Cucumis sativus])

HSP 1 Score: 160 bits (406), Expect = 4.22e-45
Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SSMKPPFAS GDYHRF PDSRLADQEPDAI++K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSMKPPFASSGDYHRFTPDSRLADQEPDAILVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match: A0A0A0K4W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380120 PE=4 SV=1)

HSP 1 Score: 180 bits (456), Expect = 2.61e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK
Sbjct: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88
          SPQLKRKSEVADYEAESTDRAIGPRFVR
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88

[Close]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match: A0A0A0KEF6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425820 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 4.71e-51
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SSMKPPFAS GDYHRF PDSRLADQEPDAI++K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSMKPPFASSGDYHRFTPDSRLADQEPDAILVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88
          SPQLKRKSEVADYEAESTDRAIGPRFVR
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFVR 88

[Close]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match: A0A5A7V2C5 (Transcription factor E2FB isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001030 PE=3 SV=1)

HSP 1 Score: 162 bits (409), Expect = 6.63e-46
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match: A0A1S3BLR6 (transcription factor E2FB isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=3 SV=1)

HSP 1 Score: 162 bits (409), Expect = 7.40e-46
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match: A0A1S3BNB0 (transcription factor E2FB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=3 SV=1)

HSP 1 Score: 162 bits (409), Expect = 7.67e-46
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0 

Query: 1  MSSSRPPNSSGHLPHQITHSLKRQLPLSSMKPPFASPGDYHRFAPDSRLADQEPDAIVLK 60
          MS SRPPNSSGHLP QI HSLKRQLP SS+KPPFASPGDYHRFAPDSRLADQE DAIV+K
Sbjct: 1  MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61 SPQLKRKSEVADYEAESTDRAIGPRFV 87
          SPQLKRKSEVADYEAESTDRAIGPRF 
Sbjct: 61 SPQLKRKSEVADYEAESTDRAIGPRFA 87

[Close]
BLAST of CsGy7G014470 vs. TAIR 10
Match: AT5G22220.2 (E2F transcription factor 1 )

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-06
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 10 SGHLPHQITHSLKRQL--PLSSMKPPFASPGDYHRF-APDSR----LADQ-EPDAIVLKS 69
          S  +P Q   S KRQL   LSSMKPP  +PG+YHRF A ++R    +ADQ   DAIV+KS
Sbjct: 2  SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70 PQLKRKSEVADYEAESTDRAIG 84
            LKRK+++ +   E  +   G
Sbjct: 62 -TLKRKTDLVNQIVEVNELNTG 81

[Close]
BLAST of CsGy7G014470 vs. TAIR 10
Match: AT5G22220.3 (E2F transcription factor 1 )

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-06
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 10 SGHLPHQITHSLKRQL--PLSSMKPPFASPGDYHRF-APDSR----LADQ-EPDAIVLKS 69
          S  +P Q   S KRQL   LSSMKPP  +PG+YHRF A ++R    +ADQ   DAIV+KS
Sbjct: 2  SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70 PQLKRKSEVADYEAESTDRAIG 84
            LKRK+++ +   E  +   G
Sbjct: 62 -TLKRKTDLVNQIVEVNELNTG 81

The following BLAST results are available for this feature:
BLAST of CsGy7G014470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FV715.9e-0546.34Transcription factor E2FB OS=Arabidopsis thaliana OX=3702 GN=E2FB PE=1 SV=1[more]
BLAST of CsGy7G014470 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44775.15.39e-57100.00hypothetical protein Csa_016105 [Cucumis sativus][more]
KAA0061728.11.37e-4590.80transcription factor E2FB isoform X2 [Cucumis melo var. makuwa][more]
XP_008449589.11.53e-4590.80PREDICTED: transcription factor E2FB isoform X2 [Cucumis melo][more]
XP_008449588.11.58e-4590.80PREDICTED: transcription factor E2FB isoform X1 [Cucumis melo][more]
XP_004140164.24.22e-4589.66transcription factor E2FB isoform X2 [Cucumis sativus] >KGN48315.2 hypothetical ... [more]
BLAST of CsGy7G014470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4W82.61e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380120 PE=4 SV=1[more]
A0A0A0KEF64.71e-5190.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425820 PE=4 SV=1[more]
A0A5A7V2C56.63e-4690.80Transcription factor E2FB isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3BLR67.40e-4690.80transcription factor E2FB isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=... [more]
A0A1S3BNB07.67e-4690.80transcription factor E2FB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=... [more]
BLAST of CsGy7G014470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22220.24.2e-0646.34E2F transcription factor 1 [more]
AT5G22220.34.2e-0646.34E2F transcription factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR12081:SF83TRANSCRIPTION FACTOR E2FBcoord: 18..85
IPR015633E2F FamilyPANTHERPTHR12081TRANSCRIPTION FACTOR E2Fcoord: 18..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G014470.2CsGy7G014470.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription regulator complex
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding