CsGy7G011630 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G011630
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description40S ribosomal protein S18
LocationGy14Chr7: 14681336 .. 14689209 (-)
RNA-Seq ExpressionCsGy7G011630
SyntenyCsGy7G011630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTGAGGAGGGTATATTGGTCAATTTAGTTTAGTCAGAAACCCTAGAATCTGATTGACAATATATAAAATCCTTCTCCACTCCCCACTTGAAGATCTCCTCCTCTGCTTCTTTCCTGCCTTTGCGCCGCCGGGGATTCAACCAACTCCTTGCCTCTATCTTCATCCGCCATGGTAACTACATTTCTTTCTTTCCCATTTTCCCTCATTCTTCTTCTATTCTTGTTAGGGTTTTATACTTTTCTTCGAATGATTTTTTTTTTCTGTTGATTTGCGCTTTTTATTTTGCATCTAGTCACTGGTAGCAAACGAGGATTTTCAGCACATCCTGCGTGTGCTCAACACCAACGTCGATGGGAAGCAAAAGATTATGTTTGCTCTTACTTCAATTAAAGGTATTGGAAGACGTTTCGCTAACATCGTTTGTAAGAAGGCTGATGTCGACATGAACAAGAGGTATTCATTGCTTTACGTTTCCCTTTTTGTTATTTTTCTTTTTAAATTTCTCCTCTTTGCCGCTTGTCTATCTAGTTTCATAGAAAGATTTAACCTTTCCCTACATCTATTCCTACATCTATTCCTGATGCGTTCCTGGGTCTGGTAAGAGAGCGATGCATGAGAATAAACCAAGTTTCTCTAGTTCACTGAATAAAATGAAACCAAAATCTTAGTCATGACTTGATGGAAATTGCTAATAATCAGGAGTTCATTAGTCCATGACTGAAGCCAAACACAATTATTCCCCTTCATCATCAACTTCATCAATTGTTAAGATCCTGGTTTTATGATGGCCTCTTTCAAATCCTCTAGAAATTCGTTTGAATTTGAACCATGTATTTGTTGAGAATCCTTCACAAAGACTGAATAAATTAGATTTGTAGCTTAGCCTTAGGATTTTCTTCGTTATAAGTGACACTGTTGCAACTATATTGTTGGTATTTATAATATACTAATATCTCTAGATATACTGGGGTAGGAGCAAATGACTCACATTGTTGCTTGCTGCAGTAATTCATTTAGGAAGTTCATAGTTGAGTCTGTTTTTAGCATATCTCTACTAATACTTGTTTATCTTTTCTTTTGTTATATGTTTAATGACCTTGACCAAATTTGGTTTTGATTTATTAACCATTTTATTACCAGCCTAGAGGATATTATAATTCCGTGTTCAGGGAAAAACTCAAGTGGTTTAACTGGTATACATCTTTGTTTTCATTTGTTATTTTGCAAACAGGGCCGGTGAACTAACTGCTGCTGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTTAAAATTCCCGACTGGTTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGTAATATGCTTGAAGTGTTTCTGCTAATGGATGATGTATTTTGTTTATTGGATATTGAGTCCCACTCCTTGCATTATGTAAATTCATAGTTCACATCGATTAATCATTTTGACATGATGAATTCAGGAACCACCGAGGTCTGAGGCACTACTGGGGCCTCCGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGCCGAGGGAAAACTGTTGGTGTCTCCAAGAAGCGTTGAGCATTTGCTTGTTTCTATAGTCGAGTTAAGTATGTGTTTGGGCAAATCAAGTTCTTTGGCCTTTTTAGTTGAACATTCGAGCTGTTCTTTCCTTTTGGAATTTTTGTTTGAGATGTGGTATTTTTGTTCAATCTTTTTTTCTACTGACTTTAATTAGGCTGGAAAAGGAAGGTTGATAGTGACAAATGGTAAAGATTATGAATCCATATTGATCCTTTTGGTGTGAAAAGGTGTTAAGAGTGCCAGTTTAATAATAGGGTTGAGAAATCATCTTATTGTTGATTTTCGAATAATGTGTTATTTTTCTAA

mRNA sequence

GTTTGAGGAGGGTATATTGGTCAATTTAGTTTAGTCAGAAACCCTAGAATCTGATTGACAATATATAAAATCCTTCTCCACTCCCCACTTGAAGATCTCCTCCTCTGCTTCTTTCCTGCCTTTGCGCCGCCGGGGATTCAACCAACTCCTTGCCTCTATCTTCATCCGCCATGTCACTGGTAGCAAACGAGGATTTTCAGCACATCCTGCGTGTGCTCAACACCAACGTCGATGGGAAGCAAAAGATTATGTTTGCTCTTACTTCAATTAAAGGTATTGGAAGACGTTTCGCTAACATCGTTTGTAAGAAGGCTGATGTCGACATGAACAAGAGGGCCGGTGAACTAACTGCTGCTGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTTAAAATTCCCGACTGGTTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGTAATATGCTTGAAGTGTTTCTGCTAATGGATGATGTATTTTGTTTATTGGATATTGAGTCCCACTCCTTGCATTATGTAAATTCATAGTTCACATCGATTAATCATTTTGACATGATGAATTCAGGAACCACCGAGGTCTGAGGCACTACTGGGGCCTCCGAGTCCGTGGTCAGCACACTAAGACCACTGGTCGCCGAGGGAAAACTGTTGGTGTCTCCAAGAAGCGTTGAGCATTTGCTTGTTTCTATAGTCGAGTTAAGTATGTGTTTGGGCAAATCAAGTTCTTTGGCCTTTTTAGTTGAACATTCGAGCTGTTCTTTCCTTTTGGAATTTTTGTTTGAGATGTGGTATTTTTGTTCAATCTTTTTTTCTACTGACTTTAATTAGGCTGGAAAAGGAAGGTTGATAGTGACAAATGGTAAAGATTATGAATCCATATTGATCCTTTTGGTGTGAAAAGGTGTTAAGAGTGCCAGTTTAATAATAGGGTTGAGAAATCATCTTATTGTTGATTTTCGAATAATGTGTTATTTTTCTAA

Coding sequence (CDS)

ATGTCACTGGTAGCAAACGAGGATTTTCAGCACATCCTGCGTGTGCTCAACACCAACGTCGATGGGAAGCAAAAGATTATGTTTGCTCTTACTTCAATTAAAGGTATTGGAAGACGTTTCGCTAACATCGTTTGTAAGAAGGCTGATGTCGACATGAACAAGAGGGCCGGTGAACTAACTGCTGCTGAGTTGGATAATCTCATGGTGGTTGTTGCCAATCCACGACAATTTAAAATTCCCGACTGGTTTTTGAATAGGCAGAAAGACTACAAGGATGGAAAATATTCTCAAGTAGTTTCAAATGCATTGGACATGAAGTTGAGAGATGATTTGGAGCGGTTGAAGAAGATTAGGTAA

Protein sequence

MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELTAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR*
Homology
[Close]
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match: P34788 (40S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.2e-59
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match: Q8ISP0 (40S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.7e-47
Identity = 87/118 (73.73%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E FQHILRV+NTN+DG++KIMFALTSIKG+GRR++NIVCKKAD+D++KRAGEL+
Sbjct: 1   MSLVIPEKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
             E++ L+ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N+LD KLR+DLERLKKIR
Sbjct: 61  DEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match: Q8IT98 (40S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.8e-46
Identity = 85/118 (72.03%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           M+L+  E FQHILRV+NTN+DGK+KIMFA+T+IKG+GRR+AN+VCKKADVD+ KRAGEL+
Sbjct: 1   MALIIPEKFQHILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
             E++ ++ +++NPRQ+KIP+WFLNRQKD KDGKYSQV+SNALD KLR+DLERLKKIR
Sbjct: 61  EDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match: Q8JGS9 (40S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.8e-45
Identity = 83/118 (70.34%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D+NKRAGELT
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
             E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR
Sbjct: 61  EDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match: Q90YQ5 (40S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-44
Identity = 82/118 (69.49%), Postives = 105/118 (88.98%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLV  E FQHILRVLNTN+DG++KI FA+T+IKG+GRR+A++V +KAD+D++KRAGELT
Sbjct: 1   MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
             E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERLKKIR
Sbjct: 61  EDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. NCBI nr
Match: XP_021689481.1 (40S ribosomal protein S18-like [Hevea brasiliensis])

HSP 1 Score: 236 bits (601), Expect = 3.65e-78
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. NCBI nr
Match: XP_004139687.1 (40S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protein S18 [Cucumis sativus] >XP_008456747.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_008461916.1 PREDICTED: 40S ribosomal protein S18 [Cucumis melo] >XP_038884290.1 40S ribosomal protein S18 [Benincasa hispida] >XP_038896640.1 40S ribosomal protein S18 [Benincasa hispida] >KGN44457.1 hypothetical protein Csa_016630 [Cucumis sativus])

HSP 1 Score: 236 bits (602), Expect = 7.96e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. NCBI nr
Match: XP_002524340.1 (40S ribosomal protein S18 [Ricinus communis] >XP_021602211.1 40S ribosomal protein S18 [Manihot esculenta] >XP_021689482.1 40S ribosomal protein S18 [Hevea brasiliensis] >XP_031251561.1 40S ribosomal protein S18-like [Pistacia vera] >XP_031258282.1 40S ribosomal protein S18-like [Pistacia vera] >EEF38080.1 40S ribosomal protein S18, putative [Ricinus communis] >OAY58510.1 hypothetical protein MANES_02G183300v8 [Manihot esculenta])

HSP 1 Score: 236 bits (601), Expect = 1.13e-77
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. NCBI nr
Match: XP_021902783.1 (40S ribosomal protein S18 isoform X1 [Carica papaya])

HSP 1 Score: 235 bits (600), Expect = 1.61e-77
Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKG+GRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. NCBI nr
Match: KAA0059528.1 (40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (602), Expect = 1.66e-77
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 23  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 82

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 83  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 140

[Close]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match: A0A0A0K7Z7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 3.85e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match: A0A1S3CH47 (40S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 3.85e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match: B9SEC1 (40S ribosomal protein S18, putative OS=Ricinus communis OX=3988 GN=RCOM_0961900 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 5.47e-78
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match: A0A2C9WFF5 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G183300 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 5.47e-78
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMV+VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match: A0A5A7UWI6 (40S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00290 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 8.04e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 23  MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 82

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118
           AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 83  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 140

[Close]
BLAST of CsGy7G011630 vs. TAIR 10
Match: AT1G22780.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-60
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. TAIR 10
Match: AT1G34030.1 (Ribosomal protein S13/S18 family )

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-60
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

[Close]
BLAST of CsGy7G011630 vs. TAIR 10
Match: AT4G09800.1 (S18 ribosomal protein )

HSP 1 Score: 227.6 bits (579), Expect = 5.1e-60
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 0 

Query: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60
           MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRR ANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELS 60

Query: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 119
           AAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR
Sbjct: 61  AAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 118

The following BLAST results are available for this feature:
BLAST of CsGy7G011630 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P347887.2e-5994.9240S ribosomal protein S18 OS=Arabidopsis thaliana OX=3702 GN=RPS18A PE=1 SV=1[more]
Q8ISP03.7e-4773.7340S ribosomal protein S18 OS=Branchiostoma belcheri OX=7741 GN=RPS18 PE=2 SV=1[more]
Q8IT981.8e-4672.0340S ribosomal protein S18 OS=Argopecten irradians OX=31199 GN=RPS18 PE=2 SV=1[more]
Q8JGS97.8e-4570.3440S ribosomal protein S18 OS=Danio rerio OX=7955 GN=rps18 PE=2 SV=1[more]
Q90YQ52.9e-4469.4940S ribosomal protein S18 OS=Ictalurus punctatus OX=7998 GN=rps18 PE=2 SV=1[more]
BLAST of CsGy7G011630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_021689481.13.65e-7899.1540S ribosomal protein S18-like [Hevea brasiliensis][more]
XP_004139687.17.96e-78100.0040S ribosomal protein S18 [Cucumis sativus] >XP_004140957.2 40S ribosomal protei... [more]
XP_002524340.11.13e-7799.1540S ribosomal protein S18 [Ricinus communis] >XP_021602211.1 40S ribosomal prote... [more]
XP_021902783.11.61e-7798.3140S ribosomal protein S18 isoform X1 [Carica papaya][more]
KAA0059528.11.66e-77100.0040S ribosomal protein S18 isoform X1 [Cucumis melo var. makuwa] >TYK14112.1 40S ... [more]
BLAST of CsGy7G011630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7Z73.85e-78100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G055370 PE=3 SV=1[more]
A0A1S3CH473.85e-78100.0040S ribosomal protein S18 OS=Cucumis melo OX=3656 GN=LOC103500403 PE=3 SV=1[more]
B9SEC15.47e-7899.1540S ribosomal protein S18, putative OS=Ricinus communis OX=3988 GN=RCOM_0961900 ... [more]
A0A2C9WFF55.47e-7899.15Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G183300 PE=3 SV=... [more]
A0A5A7UWI68.04e-78100.0040S ribosomal protein S18 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of CsGy7G011630 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22780.15.1e-6094.92Ribosomal protein S13/S18 family [more]
AT1G34030.15.1e-6094.92Ribosomal protein S13/S18 family [more]
AT4G09800.15.1e-6094.92S18 ribosomal protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 4..118
e-value: 1.9E-22
score: 77.5
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 14..118
e-value: 4.1E-39
score: 133.9
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 15..118
score: 21.054573
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.1030s ribosomal protein s13, domain 2coord: 92..118
e-value: 1.8E-8
score: 36.0
NoneNo IPR availableGENE3D1.10.8.50coord: 1..80
e-value: 5.6E-36
score: 124.6
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18-RELATEDcoord: 1..118
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 1..118
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 13..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G011630.2CsGy7G011630.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005829 cytosol
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003676 nucleic acid binding