CsGy7G010875 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G010875
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 13738337 .. 13738525 (+)
RNA-Seq Expression	CsGy7G010875
Synteny	CsGy7G010875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA

mRNA sequence

ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA

Coding sequence (CDS)

ATGGGCCAGTGTGGGCTTATTCAAATTCCCACAAGGAAGCACAAGCCCAAGCCCAAGCCCAAGCTCAAAACGCAGCGTCTCATCAACCGGAATTCGGAAATGATTCAGGTGACTCTAGCGATCACAAAGGTTCAGTCGTTTCCACAGAGAGAAGCATATTTGGGAATCCCTCCCTGTGAGTGGCGGTGA

Protein sequence

MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCEWR*

Homology

[Close]

BLAST of CsGy7G010875 vs. NCBI nr
Match: KGN44353.1 (hypothetical protein Csa_016359 [Cucumis sativus])

HSP 1 Score: 131 bits (329), Expect = 2.07e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
          MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE
Sbjct: 1  MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60

Query: 61 WR 62
          WR
Sbjct: 61 WR 62

[Close]

BLAST of CsGy7G010875 vs. ExPASy TrEMBL
Match: A0A0A0K4C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268500 PE=4 SV=1)

HSP 1 Score: 131 bits (329), Expect = 1.00e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60
          MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE
Sbjct: 1  MGQCGLIQIPTRKHKPKPKPKLKTQRLINRNSEMIQVTLAITKVQSFPQREAYLGIPPCE 60

Query: 61 WR 62
          WR
Sbjct: 61 WR 62

The following BLAST results are available for this feature:

BLAST of CsGy7G010875 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G010875 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44353.1	2.07e-38	100.00	hypothetical protein Csa_016359 [Cucumis sativus]	[more]

BLAST of CsGy7G010875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C3	1.00e-38	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268500 PE=4 SV=1	[more]

BLAST of CsGy7G010875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G010875.1	CsGy7G010875.1	mRNA