CsGy7G008800 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCGGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAA ATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCGGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAA ATGGCCATCATCAATTTTTTAGCTCATATTTTCCTTCTCCTCTCCCTCTTCTTTTCACTCGTTATCAAAGCCGAACACTTCTCCCCATGGCTAAAGGAGAAGCTCAACGATGACGAACTTGATAACGAAGATAATCGATACGGAAAACACAATTGCTCAGGCAAGCAAATTTTCTGCCGGAAATTAGACGAATATGGGTCAAAGGGGAAGAGGAAGAAGATCATGAAATGCTGCAAACACCGATGTGTTGACACTGATTCTGACATAAAAAACTGCGGATATTGTGGCAAAATCTGCCCGTTTCCACAGCAATGCTGCAAAGGTTTTTGTGTAGATACAAACAACAACCGGTTTAACTGTGGGAAGTGTGGGAATAAATGTCCTTTTCGTGTTCGTTGTGTGTACGGTATGTGTGGGTACGATCAGCCGGACCCTTCCCGGCGGCCCAAAGGATGGTGGAAGCCACCGCAATCGCCCAAGGATCGCCACTGCCCGCCACGGGCAAATGAGGGGAGGAGCTCTTTTACTTAA MAIINFLAHIFLLLSLFFSLVIKAEHFSPWLKEKLNDDELDNEDNRYGKHNCSGKQIFCRKLDEYGSKGKRKKIMKCCKHRCVDTDSDIKNCGYCGKICPFPQQCCKGFCVDTNNNRFNCGKCGNKCPFRVRCVYGMCGYDQPDPSRRPKGWWKPPQSPKDRHCPPRANEGRSSFT* Homology
BLAST of CsGy7G008800 vs. ExPASy Swiss-Prot
Match: Q9C6P6 (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16 Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 8.1e-14 Identity = 33/71 (46.48%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-11 Identity = 35/93 (37.63%), Postives = 44/93 (47.31%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy Swiss-Prot
Match: Q6EEH1 (Protein STIG1 OS=Solanum lycopersicum OX=4081 GN=STIG1 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.1e-10 Identity = 33/95 (34.74%), Postives = 46/95 (48.42%), Query Frame = 0
BLAST of CsGy7G008800 vs. NCBI nr
Match: TYK23073.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 336 bits (861), Expect = 6.53e-116 Identity = 153/176 (86.93%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of CsGy7G008800 vs. NCBI nr
Match: XP_038900147.1 (stigma-specific STIG1-like protein 1 [Benincasa hispida]) HSP 1 Score: 278 bits (712), Expect = 3.47e-93 Identity = 133/178 (74.72%), Postives = 147/178 (82.58%), Query Frame = 0
BLAST of CsGy7G008800 vs. NCBI nr
Match: KAE8646024.1 (hypothetical protein Csa_016874 [Cucumis sativus]) HSP 1 Score: 228 bits (581), Expect = 7.09e-74 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsGy7G008800 vs. NCBI nr
Match: KAA0049791.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 218 bits (556), Expect = 1.60e-70 Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of CsGy7G008800 vs. NCBI nr
Match: XP_022139655.1 (stigma-specific STIG1-like protein 1 [Momordica charantia]) HSP 1 Score: 176 bits (447), Expect = 7.02e-53 Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy TrEMBL
Match: A0A0A0K719 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G180130 PE=3 SV=1) HSP 1 Score: 389 bits (1000), Expect = 1.93e-137 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy TrEMBL
Match: A0A5D3DHL9 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00460 PE=3 SV=1) HSP 1 Score: 336 bits (861), Expect = 3.16e-116 Identity = 153/176 (86.93%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy TrEMBL
Match: A0A5A7U868 (Stigma-specific STIG1-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001510 PE=3 SV=1) HSP 1 Score: 218 bits (556), Expect = 7.76e-71 Identity = 90/101 (89.11%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy TrEMBL
Match: A0A6J1CCX1 (stigma-specific STIG1-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111010504 PE=3 SV=1) HSP 1 Score: 176 bits (447), Expect = 3.40e-53 Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 0
BLAST of CsGy7G008800 vs. ExPASy TrEMBL
Match: A0A6A1VSY5 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G001400 PE=3 SV=1) HSP 1 Score: 138 bits (348), Expect = 4.82e-38 Identity = 70/148 (47.30%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of CsGy7G008800 vs. TAIR 10
Match: AT1G50650.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 88.2 bits (217), Expect = 7.2e-18 Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of CsGy7G008800 vs. TAIR 10
Match: AT1G53130.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 78.6 bits (192), Expect = 5.7e-15 Identity = 33/71 (46.48%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of CsGy7G008800 vs. TAIR 10
Match: AT1G11925.1 (Stigma-specific Stig1 family protein ) HSP 1 Score: 75.5 bits (184), Expect = 4.8e-14 Identity = 32/75 (42.67%), Postives = 43/75 (57.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|