CsGy7G007915 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G007915
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 6158687 .. 6159072 (-)
RNA-Seq Expression	CsGy7G007915
Synteny	CsGy7G007915

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAGTGATGAAAAGGATAGTTTAATGCATGACGCAGCCGACATAGGCAAAGTTATCTAGTGTGTCATACCACTAACTATTACTAACCACTTGATCCAGACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

mRNA sequence

ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

Coding sequence (CDS)

ATGTCGCCTAGCCAAAGTGCCCTTGACCCACCAATCAGTAACCTGGACCCTGATCACATTGAATCAAATGTACTAGTGATAACTAACATAACAGAGGAAGAGGTTCTTTGCCAAACAACTATAGAGGATAAAATTCTGAACGAGGAGGGAAGTGCTGAGAAACAAGAAAAGTCAGATAAAGACGAGGCTCAAAGGGAGCATGTGGAACTTGAGATCCCTGACTTGATAGACAGTGGTTTTCGCGATGTACTTCATAACGTCATCGTGGTACCTATGAATGTCGCGTTCTAG

Protein sequence

MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDKDEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF*

Homology

[Close]

BLAST of CsGy7G007915 vs. NCBI nr
Match: KGN44043.1 (hypothetical protein Csa_011868 [Cucumis sativus])

HSP 1 Score: 185 bits (469), Expect = 9.99e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
          MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK
Sbjct: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60

Query: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96
          DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF
Sbjct: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96

[Close]

BLAST of CsGy7G007915 vs. NCBI nr
Match: KAA0033259.1 (hypothetical protein E6C27_scaffold845G00550 [Cucumis melo var. makuwa] >TYK19614.1 hypothetical protein E5676_scaffold9G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 6.81e-06
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 1   MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
           +SP+ + + PPI NLDP+HI+ NV ++ N+ E +V  +  +ED    +E + E Q  SD+
Sbjct: 38  LSPNHAPIKPPIINLDPEHIDLNVPIV-NLLEGKVKTEKVVEDVAKRDEFAEEVQ--SDE 97

Query: 61  DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96
               ++ VE          F DVLHNVI   MN  F
Sbjct: 98  VAPAKKEVE----------FCDVLHNVIAESMNATF 120

[Close]

BLAST of CsGy7G007915 vs. ExPASy TrEMBL
Match: A0A0A0K3I0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G132910 PE=4 SV=1)

HSP 1 Score: 185 bits (469), Expect = 4.84e-59
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
          MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK
Sbjct: 1  MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60

Query: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96
          DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF
Sbjct: 61 DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96

[Close]

BLAST of CsGy7G007915 vs. ExPASy TrEMBL
Match: A0A5D3D7U0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9G00190 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.30e-06
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 1   MSPSQSALDPPISNLDPDHIESNVLVITNITEEEVLCQTTIEDKILNEEGSAEKQEKSDK 60
           +SP+ + + PPI NLDP+HI+ NV ++ N+ E +V  +  +ED    +E + E Q  SD+
Sbjct: 38  LSPNHAPIKPPIINLDPEHIDLNVPIV-NLLEGKVKTEKVVEDVAKRDEFAEEVQ--SDE 97

Query: 61  DEAQREHVELEIPDLIDSGFRDVLHNVIVVPMNVAF 96
               ++ VE          F DVLHNVI   MN  F
Sbjct: 98  VAPAKKEVE----------FCDVLHNVIAESMNATF 120

The following BLAST results are available for this feature:

BLAST of CsGy7G007915 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G007915 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44043.1	9.99e-59	100.00	hypothetical protein Csa_011868 [Cucumis sativus]	[more]
KAA0033259.1	6.81e-06	37.50	hypothetical protein E6C27_scaffold845G00550 [Cucumis melo var. makuwa] >TYK1961...	[more]

BLAST of CsGy7G007915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3I0	4.84e-59	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G132910 PE=4 SV=1	[more]
A0A5D3D7U0	3.30e-06	37.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CsGy7G007915 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G007915.1	CsGy7G007915.1	mRNA