CsGy7G007150 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G007150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Thioredoxin domain-containing protein
Location	Gy14Chr7: 5148686 .. 5151520 (+)
RNA-Seq Expression	CsGy7G007150
Synteny	CsGy7G007150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTAGTCTATGGGAAGCGCCCATCTCTTTCACCTAACTTACGTATCATAATAAATATATATAAATAAATATAAAAAACGCCATCTTCAAATCTCCACTTCCGTTCCGTCAATCGCAATCTCCGGCTTCGCCCACTGAATTTTCCATCCATCTTCCTCGTCTTCGTCTTCATCTTCTTCCTTATGCCATTTTCCATTTCAAATCTTCATTACCTCAACAACCTTCTTCTCTCTTAACCATGGCTGCCTCCTTCTCTTTCTCTACTTCTCAAACTCATCCCGATCGCATTTCCCCTTACTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTCCCTTTCAATCGCCGTCTTAATCCTCGAAATGCTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGGTTTTCTGCTTCTCTCTGCCTTTTTTCTATTACTCACTTTGCATGTTACACTCCCCGATTTGGTCTCTTTCTTTAATTTTCTACTACAAACATGACTTACTATAGGTTTTACTGCGCTCTACATATTAGATCTTGATTTGTGCGATTTTGTATGATTAATGCGCTCTACGTATTGAAGGAATTTAGTTGTTGATGGAAATTTAAATGACTAAGCGAGATTGACTTTGTTTTACATGTTAGAAGATTGGGTTTAATTACGATCTTATCATGTGATTTGTTTTGTTAGTTTACTGGTGATTAAAGTAATGTTGGCATTGTTTGTGTTAATTCGAGATCCATTCTTAAATTTGCGGTGTAAAGCTAGCTGGAATGATGTATATTCCTGAAATAGAAGAATTTCGTTTCTGTTTAATGTGTTAAGAAATATGCGTTAATTGTATTAGTTACTTTCTAGGTAGTTTTAGGAGAACATTTGATTTTGTTCCTCTTCTGTAGTGTTTCAATCTTTGAACGTTTTTGCCTGTTTTTGACTTGGTCTTATTCTGATGATTTTATCAAGAGGAAATCCGAAAGATGCTACTTTTGGATTAACTATTGGATTATTAGGGTTTTCGATCATATTATGGTGAATGGTTGAAGATTTGAGTAGAAAAAAGGCTTGGACGATTCTGTTTCAAAGCAATCTGTTGTCCGTTATTTACACATAGAACTTCCCTTAGATCCAAGTTAAGACAAATCTTGTAGCTGCTTAGTGCTTAGAAACAGCATTTTCATTTCCATATGTTGAGCTTGTCAAGCATGGTAACTCCTTTCATCAACTTTCAAAAGTTAGTAATTTTTTTAGATCTTTCTCGCTTAGAGTTTGTTCTTTTTTTACGTGCATTTGAATTCCAAGTTTGTAGAGTAAATGTTTGTTCTTATCCGCTCTCACCTGTCAAGGGAAGAGTGCCTTTTCTGACTTTCTATCCCATTTTTTGTTGAGATGATGGTACATAGATTATTCTTGGTCAATTTTCATTCATTGTATTTTGTTGTATGTTCCCCATCGTTTGAATTTATTACTGAACATAAGCTTTACCCAAGTGAACCTTTGTTTTCGAATGATGTTTTCCAGTTGATATTAGTTCTTCATCTGTTTTCTCTTCCAAAGTATGCATGCTGTATACCATCTTTCAGAAAATAAACAACAGACAGACACACACACAACATCAATCTCTTTTTTGTTTGAAAGGGAAGAAAAGTCTTAAGCTAAATTATTTTAGGAAACGTTTGCCTGTGGAATTAGTATCTTGTATGAATAGATTATTATGACAGTCTTATATTTCTTGCATCAGTCATCCTTCCTCCCTGGTCAATGCCTTCTTTATCTAGTAAATTATTCTTCACAAGCACTTAAACCAACCTCACTGCTTACTATGAAAACTACTAATTGATAAGAGTATGTTCACCTATGGTATCATTATTAGATTATTCTATTGTGACTCGGCAACAACCTTAGTATTAAGAAATTTTATGCTCATTGAAGTCTAAAAAATTCTAGACTTGGATCCCCAGAATGCCTTTCTAAATAATCTTGCTATTTTCATCCCCAGCTGAGGTGGTTACTAAAGACTCATGGAACAAAATGATTCTAGAGAGCGGAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTGCATCGAGTTATCGACGAGATAGCTGCTGAATATGATGGGAAGCTGAAATGCTTTGTGCTCAACACCGACACCGATCTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGATAGCGTGATAGGGACAATGCCAAAGGATTTCTATATTGCTGCCGTTGAAAGGGTCCTGAAGCAGTAGGAGACATGAGCAATCGAATAGGATATCTTTGGTAAGGTTGACCAGCTTGATTGTGCGAGTTGGTTGGCCATTTTGTTGCCAAAGCTTTCCACTGGTTTACTAGTTCTTGAGGTGTATATAATAAATATAGCTTTTAATCCCAAGTTTCTTACTGTAGTTGGAATGGATTGTATAGCCTTCATTGTTGTGTTGTCTTCTCGTTGTGAAGTTATGAAACATTGCTTCATTGCATTCCACACTTCACTTCTAATGGCTTTTTGGTGAAGATTCGCAAGTCATCAACCATTTTCTTACAGAGGGTATTTGAAGATATAGGGCCACTGAGTGTTCTTTTATTTGGTAATAATCTCTCTAAGGGCCACTCTGTCACTTTTACATGATAATAATCTCTCTATATTGTAATTTTGAAAAATAAGAGAGATTATCAGAAGATTTTGTCTGATTCTTATGGTATTTTTTAAATATAGACCATGAGATATATATTAATTAATTTAGTTGTTTGCAATC

mRNA sequence

GTTTAGTCTATGGGAAGCGCCCATCTCTTTCACCTAACTTACGTATCATAATAAATATATATAAATAAATATAAAAAACGCCATCTTCAAATCTCCACTTCCGTTCCGTCAATCGCAATCTCCGGCTTCGCCCACTGAATTTTCCATCCATCTTCCTCGTCTTCGTCTTCATCTTCTTCCTTATGCCATTTTCCATTTCAAATCTTCATTACCTCAACAACCTTCTTCTCTCTTAACCATGGCTGCCTCCTTCTCTTTCTCTACTTCTCAAACTCATCCCGATCGCATTTCCCCTTACTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTCCCTTTCAATCGCCGTCTTAATCCTCGAAATGCTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGCTGAGGTGGTTACTAAAGACTCATGGAACAAAATGATTCTAGAGAGCGGAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTGCATCGAGTTATCGACGAGATAGCTGCTGAATATGATGGGAAGCTGAAATGCTTTGTGCTCAACACCGACACCGATCTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGATAGCGTGATAGGGACAATGCCAAAGGATTTCTATATTGCTGCCGTTGAAAGGGTCCTGAAGCAGTAGGAGACATGAGCAATCGAATAGGATATCTTTGGTAAGGTTGACCAGCTTGATTGTGCGAGTTGGTTGGCCATTTTGTTGCCAAAGCTTTCCACTGGTTTACTAGTTCTTGAGGTGTATATAATAAATATAGCTTTTAATCCCAAGTTTCTTACTGTAGTTGGAATGGATTGTATAGCCTTCATTGTTGTGTTGTCTTCTCGTTGTGAAGTTATGAAACATTGCTTCATTGCATTCCACACTTCACTTCTAATGGCTTTTTGGTGAAGATTCGCAAGTCATCAACCATTTTCTTACAGAGGGTATTTGAAGATATAGGGCCACTGAGTGTTCTTTTATTTGGTAATAATCTCTCTAAGGGCCACTCTGTCACTTTTACATGATAATAATCTCTCTATATTGTAATTTTGAAAAATAAGAGAGATTATCAGAAGATTTTGTCTGATTCTTATGGTATTTTTTAAATATAGACCATGAGATATATATTAATTAATTTAGTTGTTTGCAATC

Coding sequence (CDS)

ATGGCTGCCTCCTTCTCTTTCTCTACTTCTCAAACTCATCCCGATCGCATTTCCCCTTACTCTAACCTCAATTCCCTTCGCCTTTTCTCTCCTCCTTCCAATCTCCCTTTCAATCGCCGTCTTAATCCTCGAAATGCTTCTCTCACTCTCAACATCCAATGCATCAGTCAACCTAAAGCTGAGGTGGTTACTAAAGACTCATGGAACAAAATGATTCTAGAGAGCGGAACCCCTGTCCTGGTTGAATTTTATGCTAGTTGGTGTGGACCATGTAGAATGGTGCATCGAGTTATCGACGAGATAGCTGCTGAATATGATGGGAAGCTGAAATGCTTTGTGCTCAACACCGACACCGATCTGCAAATAGCTGAAGACTACGAAATTAAGGCTGTTCCTGTGGTTATGCTGTTCAAGAATGGGGAGAAATGTGATAGCGTGATAGGGACAATGCCAAAGGATTTCTATATTGCTGCCGTTGAAAGGGTCCTGAAGCAGTAG

Protein sequence

MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKAEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ*

Homology

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BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot
Match: Q9SEU7 (Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 7.0e-44
Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 0


Query: 2   AASFSFSTSQTHPDR-ISPYSNLNSLRLFSPPSNLPFNRR--LNPRNASLTLNIQCISQP 61
           ++S  F+ ++ H  R IS  S L  +  FSP S    +RR  L+   + L L+  C+   
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDS 66

Query: 62  KAEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDT 121
           +A  VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDEIA +Y GKL C++LN D 
Sbjct: 67  RAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADN 126

Query: 122 DLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
           DL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+A+ERVL
Sbjct: 127 DLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot
Match: Q7XQQ2 (Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0430800 PE=2 SV=4)

HSP 1 Score: 138.3 bits (347), Expect = 8.0e-32
Identity = 57/111 (51.35%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 52  IQCISQPK-AEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLK 111
           + C   P+ A+ +T  SWN+ ++ S  PVL+EF+ASWCGPCRMVHR++DEIA EY G++K
Sbjct: 58  VSCAYSPRGAKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIK 117

Query: 112 CFVLNTDTDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVER 162
           C+ L+TD   Q+A  Y I+ +P V+LFK+GEK  S+ GT+PK  Y+ A+E+
Sbjct: 118 CYKLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRAIEK 168

[Close]

BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot
Match: Q7X8R5 (Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0530600 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 4.9e-29
Identity = 66/167 (39.52%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 3   ASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQ----CISQP 62
           AS S S S     R  P S     +     S    NRR   R AS+   +Q     I  P
Sbjct: 17  ASASASASSARRLRAVPPSRGIRYQALRADSGFAGNRRGGGRGASVVCAVQGQDTSIQVP 76

Query: 63  KAEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDT 122
           +   VTK +W  +++ES  PVLV ++A+WCGPC+M+  V+ +++ EY+GKLKC+ LNTD 
Sbjct: 77  E---VTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDE 136

Query: 123 DLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 166
           +  IA  Y ++++P +M+FKNGEK D+VIG +P+   IA++E+ +++
Sbjct: 137 NPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFVER 180

[Close]

BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot
Match: Q6H7E4 (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-27
Identity = 48/101 (47.52%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 63  VTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDLQI 122
           VTK +W  +++ES  PVLVEF+ASWCGPC+M+  VI +++ EY+GKL C+ LNTD +  I
Sbjct: 71  VTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEYEGKLNCYKLNTDENPDI 130

Query: 123 AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
           A  + I+++P +M+FKNGEK D+VIG +P+   ++++++ +
Sbjct: 131 ATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

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BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot
Match: P23400 (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 50/109 (45.87%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 55  ISQPKAEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVL 114
           + + +A  V  D++  ++LES  PVLV+F+A WCGPCR++  V+DEIA EY  KLKC  L
Sbjct: 31  VVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKL 90

Query: 115 NTDTDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
           NTD    +A +Y I+++P +M+FK G+KC+++IG +PK   +  VE+ L
Sbjct: 91  NTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139

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BLAST of CsGy7G007150 vs. NCBI nr
Match: XP_004136977.1 (thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein Csa_017328 [Cucumis sativus])

HSP 1 Score: 336 bits (861), Expect = 2.74e-116
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. NCBI nr
Match: XP_008454954.1 (PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxin M3 [Cucumis melo var. makuwa] >TYK06754.1 thioredoxin M3 [Cucumis melo var. makuwa])

HSP 1 Score: 318 bits (814), Expect = 4.03e-109
Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAAS SFST QTHP RISPYSNLNSLRLFSPPSNL  NRR NPRNASLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. NCBI nr
Match: XP_038887358.1 (thioredoxin M3, chloroplastic [Benincasa hispida])

HSP 1 Score: 309 bits (791), Expect = 1.30e-105
Identity = 151/165 (91.52%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAASFSFST QT P+RISP+SNLNSLRLFSPPS+L  NRRL PRNASLTLN+QCISQPKA
Sbjct: 1   MAASFSFSTPQTLPNRISPHSNLNSLRLFSPPSSLRLNRRLKPRNASLTLNVQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGT VLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTD+
Sbjct: 61  EVVTKDSWNKMILESGTTVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDM 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. NCBI nr
Match: KAG6588665.1 (Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022451.1 Thioredoxin M3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281 bits (720), Expect = 8.64e-95
Identity = 137/165 (83.03%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MA+S  FS  QT P+RIS +SNLNSL  FSPPSNL  +RR+  RNASLTLN+QC+SQ KA
Sbjct: 1   MASSLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG PVLVEFYASWCGPCRMVHRVIDE+AA+Y+GKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. NCBI nr
Match: XP_023531830.1 (thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (720), Expect = 8.64e-95
Identity = 137/165 (83.03%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MA+S  FS  QT P+ IS +SNLNSL  FSPPSNL  +RR+  RNASLTLN+QC+SQPKA
Sbjct: 1   MASSLPFSVPQTLPNCISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG PVLVEFYASWCGPCRMVHRVIDE+AA+Y+GKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL
Match: A0A0A0K2M6 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610 PE=4 SV=1)

HSP 1 Score: 336 bits (861), Expect = 1.33e-116
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA
Sbjct: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL
Match: A0A5D3C652 (Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.95e-109
Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAAS SFST QTHP RISPYSNLNSLRLFSPPSNL  NRR NPRNASLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL
Match: A0A1S3C0H5 (thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.95e-109
Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MAAS SFST QTHP RISPYSNLNSLRLFSPPSNL  NRR NPRNASLTLNIQCISQPKA
Sbjct: 1   MAASISFSTPQTHPHRISPYSNLNSLRLFSPPSNLRINRRPNPRNASLTLNIQCISQPKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDE+AAEY+GKLKCFVLNTDTDL
Sbjct: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDELAAEYEGKLKCFVLNTDTDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           Q+AEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 121 QVAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL
Match: A0A6J1JEI0 (thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 PE=4 SV=1)

HSP 1 Score: 281 bits (720), Expect = 4.18e-95
Identity = 137/165 (83.03%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MA+S  FS  QT P+RIS +SNLNSL  FSPPSNL  +RR+  RNASLTLN+QC+SQ KA
Sbjct: 1   MASSLPFSVHQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 60

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG PVLVEFYASWCGPCRMVHRVIDE+AA+Y+GKLKCFVLNTD DL
Sbjct: 61  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 120

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAA+ERVLKQ
Sbjct: 121 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 165

[Close]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL
Match: A0A6J1EMB5 (thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 7.30e-94
Identity = 136/165 (82.42%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 1   MAASFSFSTSQTHPDRISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA 60
           MA+   FS  QT P+RIS +SNLNSL  FSPPSNL  +RR+  RNASLTLN+QC+SQ KA
Sbjct: 23  MASYLPFSVPQTLPNRISSHSNLNSLCFFSPPSNLRLHRRIRARNASLTLNVQCVSQAKA 82

Query: 61  EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDL 120
           EVVTK+SWNKMILESG PVLVEFYASWCGPCRMVHRVIDE+AA+Y+GKLKCFVLNTD DL
Sbjct: 83  EVVTKESWNKMILESGIPVLVEFYASWCGPCRMVHRVIDELAADYEGKLKCFVLNTDKDL 142

Query: 121 QIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165
           QIAEDYEIKAVPVVMLFKNGEKC+SVIGTMPKDFYIAA+ERVLKQ
Sbjct: 143 QIAEDYEIKAVPVVMLFKNGEKCESVIGTMPKDFYIAAIERVLKQ 187

[Close]

BLAST of CsGy7G007150 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.0e-45
Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 0


Query: 2   AASFSFSTSQTHPDR-ISPYSNLNSLRLFSPPSNLPFNRR--LNPRNASLTLNIQCISQP 61
           ++S  F+ ++ H  R IS  S L  +  FSP S    +RR  L+   + L L+  C+   
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDS 66

Query: 62  KAEVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDT 121
           +A  VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDEIA +Y GKL C++LN D 
Sbjct: 67  RAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADN 126

Query: 122 DLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
           DL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+A+ERVL
Sbjct: 127 DLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 171

[Close]

BLAST of CsGy7G007150 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 7.2e-44
Identity = 91/166 (54.82%), Postives = 119/166 (71.69%), Query Frame = 0


Query: 2   AASFSFSTSQTHPDR-ISPYSNLNSLRLFSPPSNLPFNRR--LNPRNASLTLNIQCISQP 61
           ++S  F+ ++ H  R IS  S L  +  FSP S    +RR  L+   + L L+  C+   
Sbjct: 7   SSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDS 66

Query: 62  KAEV-VTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTD 121
           +A   VT+ SW   +L+S TPVLVEFY SWCGPCRMVHR+IDEIA +Y GKL C++LN D
Sbjct: 67  RAAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNAD 126

Query: 122 TDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
            DL +AE+YEIKAVPVV+LFKNGEK +S++GTMPK+FYI+A+ERVL
Sbjct: 127 NDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of CsGy7G007150 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-27
Identity = 63/166 (37.95%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 2   AASFSFSTSQTHPDRISPYSNLNSLR-LFSPPSNLPFNRRLN-PRNASLTLNIQCISQPK 61
           +A+ S S  +  P R   +  L S R L +  ++L  NRR    R   +    Q  +   
Sbjct: 26  SAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQDTTAAA 85

Query: 62  AEV--VTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTD 121
            EV  ++   W   +LES  PVLVEF+A WCGPCRM+H ++D++A ++ GK K + +NTD
Sbjct: 86  VEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTD 145

Query: 122 TDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
                A  Y I++VP V++FK GEK DS+IG +P++     +ER L
Sbjct: 146 ESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CsGy7G007150 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 105.1 bits (261), Expect = 5.4e-23
Identity = 44/125 (35.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 42  NPRNASLTLNIQCISQPKA---EVVTKDSWNKMILESGTPVLVEFYASWCGPCRMVHRVI 101
           N R + L   + C +Q  A    VV   +W+ ++L++  PV V+F+A WCGPC+M+  ++
Sbjct: 55  NSRVSRLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIV 114

Query: 102 DEIAAEYDGKLKCFVLNTDTDLQIAEDYEIKAVPVVMLFKNGEKCDSVIGTMPKDFYIAA 161
           +E+A +Y G+ K + LNTD        Y ++++P +M+F NGEK D++IG + KD    +
Sbjct: 115 NELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATS 174

Query: 162 VERVL 164
           + + L
Sbjct: 175 INKFL 179

[Close]

BLAST of CsGy7G007150 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 48/150 (32.00%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 17  ISPYSNLNSLRLFSPPSNLPFNRRLNPRNASLTLNIQCISQPKA---EVVTKDSWNKMIL 76
           + P S+   +RL   P++L    +  PR + L   + C +Q      +VV   +W+ ++L
Sbjct: 38  VLPESSGLRIRLSLSPASLTSIHQ--PRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVL 97

Query: 77  ESGTPVLVEFYASWCGPCRMVHRVIDEIAAEYDGKLKCFVLNTDTDLQIAEDYEIKAVPV 136
           ++  PV+V+F+A WCGPC+M+  +++++A  Y GK+K + LNTD        Y ++++P 
Sbjct: 98  KATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPT 157

Query: 137 VMLFKNGEKCDSVIGTMPKDFYIAAVERVL 164
           +M+F  GEK D++IG +PK    +++++ L
Sbjct: 158 IMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185

The following BLAST results are available for this feature:

BLAST of CsGy7G007150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEU7	7.0e-44	55.15	Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=2 SV=2	[more]
Q7XQQ2	8.0e-32	51.35	Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q7X8R5	4.9e-29	39.52	Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0...	[more]
Q6H7E4	2.0e-27	47.52	Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0...	[more]
P23400	2.7e-27	45.87	Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=TRXM P...	[more]

BLAST of CsGy7G007150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136977.1	2.74e-116	100.00	thioredoxin M3, chloroplastic [Cucumis sativus] >KGN43925.1 hypothetical protein...	[more]
XP_008454954.1	4.03e-109	94.55	PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo] >KAA0031302.1 thioredoxi...	[more]
XP_038887358.1	1.30e-105	91.52	thioredoxin M3, chloroplastic [Benincasa hispida]	[more]
KAG6588665.1	8.64e-95	83.03	Thioredoxin M3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_023531830.1	8.64e-95	83.03	thioredoxin M3, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy7G007150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2M6	1.33e-116	100.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G073610...	[more]
A0A5D3C652	1.95e-109	94.55	Thioredoxin M3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00550 ...	[more]
A0A1S3C0H5	1.95e-109	94.55	thioredoxin M3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495242 PE=4 SV=1	[more]
A0A6J1JEI0	4.18e-95	83.03	thioredoxin M3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486177 P...	[more]
A0A6J1EMB5	7.30e-94	82.42	thioredoxin M3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111434657...	[more]

BLAST of CsGy7G007150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15570.1	5.0e-45	55.15	Thioredoxin superfamily protein	[more]
AT2G15570.2	7.2e-44	54.82	Thioredoxin superfamily protein	[more]
AT3G15360.1	6.1e-27	37.95	thioredoxin M-type 4	[more]
AT1G03680.1	5.4e-23	35.20	thioredoxin M-type 1	[more]
AT4G03520.1	1.2e-22	32.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 127..138 score: 27.78 coord: 79..87 score: 61.79 coord: 87..96 score: 49.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 61..165 e-value: 1.7E-28 score: 100.7
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 29..165
None	No IPR available	PANTHER	PTHR45663:SF21	THIOREDOXIN M3, CHLOROPLASTIC	coord: 29..165
None	No IPR available	CDD	cd02947	TRX_family	coord: 66..160 e-value: 1.50049E-29 score: 101.866
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 61..157 e-value: 9.5E-24 score: 83.4
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 39..165 score: 12.395929
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 64..160 e-value: 1.2E-28 score: 97.2
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 80..98
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 53..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G007150.1	CsGy7G007150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0043085	positive regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein-disulfide reductase activity