CsGy7G006060 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTACTGATCTCCCTTACCTTCTTCTTCAATACAACTAGAATCTTCCCTTTCATAAAGTTCTGTTCACATATCTCTCTTTGAGAATTCCAAAAACTAATTAATACCCATTGAAGAAACAAAGATAAAGTAGAAAAAAGGAAGAAAAAAAGTACCGTAGTTTCTTGAGTTTTCTCATATATTAAGTATTGTGATTTAAATACCCTTGTTGTTCTTCCTCTTGATCATAGTCTCTTGGGTTGTAAGCTTCTGCTGGATAGAAGATATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGTATGTTGAGCTAGCTATGTTCAGGTTGGTAATTCCGTTGTTACGTTTTGTTTGATTTAGTAATTTGGGGTGGTGTGGATTTATTTGCAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGGTATGCCAAAAAGCTTCTTCTTTTTGTTGATAATTAAACTCTCTCTTTAATTGTTCTGGTTTTGCTTGCATATATCAAAACTGAAGGTTTGAATTGAGAGTGTTAGGATGATCTAAAGAAAATTTATATCTGTACTACCGTGATAAAAGATAGAACTTGAACATGCTGCCTTTGATTTAGTTTCTTGACATCTTTCTTTCTCGGGTGCTAAACATATCGAAGTGACGAGATCGTCTATGAAGTTTGAACTACATCTTAGGTTTGGATTCTATGTTTTCTTTAGTGTGGCTTAACAGAGGGTTTCACTTTGTGTTTGCAGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGATGCTATGAGAGAATTCATTGCCTTTGTAGCTGTAAATTGCCTCATCTCTTATCTCTTTTCTTTTCTTATTTTGTGAGTGTGGTTTTATTTTGTGTAAACTTGGAAAGAACATTGATTGGTGTGCAGAATAAAAGCTGCTTTGCTGTAAAGTATATTATATAGAGTTTGTATATGCTCATTCTCGTTA CTACTGATCTCCCTTACCTTCTTCTTCAATACAACTAGAATCTTCCCTTTCATAAAGTTCTGTTCACATATCTCTCTTTGAGAATTCCAAAAACTAATTAATACCCATTGAAGAAACAAAGATAAAGTAGAAAAAAGGAAGAAAAAAAGTACCGTAGTTTCTTGAGTTTTCTCATATATTAAGTATTGTGATTTAAATACCCTTGTTGTTCTTCCTCTTGATCATAGTCTCTTGGGTTGTAAGCTTCTGCTGGATAGAAGATATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGATGCTATGAGAGAATTCATTGCCTTTGTAGCTGTAAATTGCCTCATCTCTTATCTCTTTTCTTTTCTTATTTTGTGAGTGTGGTTTTATTTTGTGTAAACTTGGAAAGAACATTGATTGGTGTGCAGAATAAAAGCTGCTTTGCTGTAAAGTATATTATATAGAGTTTGTATATGCTCATTCTCGTTA ATGAGTGATCCCAAATATGCCTATCCCTACCCACCTCCTCAAGGAGGATATTATCAAGGGCCACCAGTGATGGCGCCACCGCAGTACGCCGCCCCACCGCCAAGACGACAACCGGGTTTCTTGGAGGGATGCCTTGCAGCTCTATGCTGCTGCTGTCTCCTTGATGAATGCTGCTGTGACCCTTCCATTATCTTTCTTACTTGA MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCDPSIIFLT* Homology
BLAST of CsGy7G006060 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.5e-08 Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 9.6e-08 Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 3.4e-05 Identity = 36/79 (45.57%), Postives = 40/79 (50.63%), Query Frame = 0
BLAST of CsGy7G006060 vs. NCBI nr
Match: KAG6571885.1 (hypothetical protein SDJN03_28613, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011569.1 hypothetical protein SDJN02_26475 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140 bits (354), Expect = 4.48e-42 Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CsGy7G006060 vs. NCBI nr
Match: KAF9609677.1 (hypothetical protein IFM89_017856 [Coptis chinensis]) HSP 1 Score: 134 bits (338), Expect = 1.24e-39 Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CsGy7G006060 vs. NCBI nr
Match: EEF35140.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 130 bits (328), Expect = 3.95e-38 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. NCBI nr
Match: PON97107.1 (Cysteine-rich transmembrane CYSTM domain containing protein [Trema orientale]) HSP 1 Score: 130 bits (328), Expect = 3.95e-38 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. NCBI nr
Match: DAD40851.1 (TPA_asm: hypothetical protein HUJ06_015174 [Nelumbo nucifera]) HSP 1 Score: 130 bits (327), Expect = 5.61e-38 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy TrEMBL
Match: B9SMJ5 (CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3 SV=1) HSP 1 Score: 130 bits (328), Expect = 1.91e-38 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy TrEMBL
Match: A0A2P5FH35 (Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_071570 PE=3 SV=1) HSP 1 Score: 130 bits (328), Expect = 1.91e-38 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy TrEMBL
Match: A0A5D2LKA4 (CYSTM domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G038500v1 PE=3 SV=1) HSP 1 Score: 130 bits (326), Expect = 3.86e-38 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy TrEMBL
Match: A0A0D2NVV1 (CYSTM domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_003G036100 PE=3 SV=1) HSP 1 Score: 130 bits (326), Expect = 3.86e-38 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. ExPASy TrEMBL
Match: A0A5J5S184 (CYSTM domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D03G035800v1 PE=3 SV=1) HSP 1 Score: 130 bits (326), Expect = 3.86e-38 Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of CsGy7G006060 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 2.5e-19 Identity = 50/74 (67.57%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of CsGy7G006060 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 58.9 bits (141), Expect = 1.8e-09 Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of CsGy7G006060 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 6.9e-09 Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsGy7G006060 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 4.2e-06 Identity = 34/86 (39.53%), Postives = 39/86 (45.35%), Query Frame = 0
BLAST of CsGy7G006060 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 2.1e-05 Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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