CsGy7G004380 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G004380
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ras-related protein Rab11D
Location	Gy14Chr7: 3300729 .. 3304231 (-)
RNA-Seq Expression	CsGy7G004380
Synteny	CsGy7G004380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACATTTTCTCGTTTGTTCTTGAAGCACAGTACAAAATTCAAATTCACTGTCTTTCCCTTTGCTTTTTCCATAGCTCCCGAACAAAGACCTCCACTAAAACGAAGACAAAAGTTTTCTTTTTTATATACGTACACAATTACTTTTCGTTTCCTTTTGTTGTGGGTATTCCCAATTTTCTTCGGTTTCGAAGAACGAAGTGAGAAATCTAGAGGAAGAGTCTTATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTTTGCTTATTCCTTCTTCTTTTTTCAAGTTCCAATCCATTTTAGTCAACTAAATTGACGGTATCTCTCAAAATTCCTATTACCCTTCCATGATTTCTTTGCCTTCGTATCAATTGAATGAGAATCACGTCGATATATTCTACAGTTATTTGAAATTTGGTGGGATGATTCTTTTTGGACTGCCTTTACCTTTATTTTGTGATTAAAGGAAGAGGGAGGGTTATTTGTGGACTAAATCGTAAGGTATGAGGCAAAGGAAGAACTCCCTTGATTTTACTGCTGTCATTTATTATCTGATGGTCATGTGATGTAGAAGCTGGTTCTGTTCAAGTTTCATGCGTTGAGGAAGTACTCTGTTTTCCCCTCCACTACTTGTATGTACCCAACATGTTTGTATGCTTGCAGTTTGATTGTGATTGGCAGAATGCTTTCTAATCGTAGCAATAGTTGCAAATTAGTCTTATCATGAAGGTGGTTTATCCTTGAAAATCTGGTGGCCTTCAAGAGTTTAGTTTATCTTACATACTTTGAAATTAGTATTGAACAGTGAATAATGAAATTTTTATTGAAGTATTGATACACTTAAACTTATCATAATCCATCAGTTTAAGCTTTAAGTTCATCTGTGATTTAACATGATATTAGGGTAGGAGGTGTTGCGTTGGAACTCATGTAATGTTATTTCTTCCTCCAAATTAATATTGATTTCCATTTGTTGAGTTCTACAAATTTCTAAGCCTACAAGTGAGGTAGAGGGTTGATATGTTTAAACCTACAGTAAATGTTAGCTTAAGTTATTGGGTTTGTCAACAATTTCCATGGGGAGTGAGTGCATAATTGGTATCATTTGCAATTGGAATGGTGTTGTTTTCGGTTTTGTTAGTACTTGTTCGGTTGTTCTAGTTTTTATTTGCTTGTCCATTGGAGGAACTTGTGGCATCATTGCATAGAAATGGAGCCTCTCAGATATTTTTTTCTTCTAGAGATAAGGAATTGTTCCATTTCCTCCTAGGTTGGTGTTCAAAGTGTCCTGATCAAATGAAGCCGATGTAGACTACTTCTCTTGTCTCCCTGAAACAAAATTCTCATCTGTTCAATATCCATACTACCTTCTTAATAGTTATGGGTCAAAATAAATACAATGGTCTAGTGTGATCTTAGAATTGTAGCCTAGTTCAAACTTCAAGGCTTTTCTTTACTGAACTTTAAACAGCCACTAGAATCTGAGACCATTTATCGAAATGTGCAGAAGCTGGCAACTAATAGTTTCTATATTGCCAAAGTGAATTCTGCTCAATGGTATTAGCATATGACCTCCATACCAAGAGGTCAGAGGGTTCAATGGCTCCCTTCGTAATTGTTGTCTCTAAAAAGTATAGTTTCTATATTTGTGCAAGGGTTCTGTAGGTCCATAACAATAACGAGCACAAGTAATTGTGTGACGTTTTGTGATATATACTCATATCAAATAAAGCAGGGAAGTTTATTGGTAGTATGGACATGCTGAAGCTGGCATCTAAGGATTATTTATCACATTAGTATAAGGGCTAGGTGTATTGACACAAGTAGTTGTTTGAACTCTGAGTAATTTTTTACTTGACATATATATCATATAAATCATATGAGATGTGTTATACTGTGCTCAACTTAATCTGGTTAGTCATTTGAGGTTTTCTTTTCTACCTCAATTGAGGGTTGAAGTTCTTTTGTTCATTATGATTTTCATTTTTGATAAGATTGTTTTTTCGTTAACTAACTATTCCTGAGATTATTAACTGTTGAAAAACATCAATCCAAATCCATTGGATTGGTAGGTGGTGTGGGGGGTGAGGTGGATTAGAAAATTCTATGCTTCTGGATGTTCTAGTCCATTTTGTAATATTCATGTGAATAGAAATATAAAGTTTTTCTTAATTTGCTTGCCACCGCAGAAGGGTTAAACAACTTCCAACTTGTAGTTTCCAATATAATTTTAGTTGCTCAACTAGCTAACCTTGGGTCCACTTGACTGAGCCTTCGCTTTGTACTTTTTCCCCTCCTATTTAACTCAATAATTGACTGGAAGTTTTATGGGACTTCTTCTTTGTTGGTTTTATTTTATTTTTTGTACGAGAATAAGGGCCTCTTTGGAATGACTCTTCAAGTGCTTTGAAAAGTCATTCCAAACTTGCCCAAGCTCTAAATCATCTGGCTGCGTTCATAATTGAGGTTTATATGATTTTCATTCAAATAAAAGTTGTTGAGGACAGTATGTATGGGCATACTCTCATAGCTATATGGATTTGTAGTTATAACTTCAAAGATCATTAATTCAGATTGATTCTTTCTTTGTAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAAGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGAGATGAAATAAGCTTCAAAACCTCAACTTGGAAATACAGCAAGAGATATTTCTTTTGTATATTTGTATTGTATCAGTTTGTGTAGAATAAAGAGCTTGGTTGTGGGTGGTGGTTGTGTGAAAGGCGCTTTTCTTGATGTGTTATAGTCCCTCCACATAAGTGTTGGAGTTTGCTCTTCTTTACATTCCAAAGAACATTTGAAACTTGAAATTTACCGTTGTAATGCTGAACTTTGTACATATTTTCTTGTTTCAAATGCACCCAAAATAATTTCAATTATCCCCTTA

mRNA sequence

GCACATTTTCTCGTTTGTTCTTGAAGCACAGTACAAAATTCAAATTCACTGTCTTTCCCTTTGCTTTTTCCATAGCTCCCGAACAAAGACCTCCACTAAAACGAAGACAAAAGTTTTCTTTTTTATATACGTACACAATTACTTTTCGTTTCCTTTTGTTGTGGGTATTCCCAATTTTCTTCGGTTTCGAAGAACGAAGTGAGAAATCTAGAGGAAGAGTCTTATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAAGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGAGATGAAATAAGCTTCAAAACCTCAACTTGGAAATACAGCAAGAGATATTTCTTTTGTATATTTGTATTGTATCAGTTTGTGTAGAATAAAGAGCTTGGTTGTGGGTGGTGGTTGTGTGAAAGGCGCTTTTCTTGATGTGTTATAGTCCCTCCACATAAGTGTTGGAGTTTGCTCTTCTTTACATTCCAAAGAACATTTGAAACTTGAAATTTACCGTTGTAATGCTGAACTTTGTACATATTTTCTTGTTTCAAATGCACCCAAAATAATTTCAATTATCCCCTTA

Coding sequence (CDS)

ATGGCTGGTTATAAAGGTCATGATGAGTATGATTATCTGTTTAAGCTTGTTTTGATCGGTGATTCTGGTGTGGGCAAATCAAACTTGCTCTCCAGATTTACAAGGAATCAATTTAATTTAGAATCAAAGTCTACGATTGGGGTTGAGTTTGCTACCAAGAGTTTGGAAATTGATGGGAAGGTAATCAAGGCTCAGATTTGGGATACTGCTGGACAAGAAAGGTACCGAGCGATAACCAGTGCTTACTACCGTGGGGCAGTAGGTGCTTTGCTCGTGTACGATGTCACTCGACGTCCAACATTTGAAAATGCTGCAAGATGGTTAAAGGAATTAAGGGATCACACAGACCCAAACATGGTAGTGATGCTAATTGGCAACAAATGTGATTTACGACACCTTATTCTTGTTCCAACAGAAGATGGAAAATCATTTGCTGAGAGGGAGTCTTTGTACTTCATGGAGACCTCTGCATTGGATGCAACAAACGTTGAAAGCGCTTTCACAGAGGTACTCTCTCAAATATATCGAATCGTGAGCAAGAGATCAGTTGAGGCAGGCGATATTGGAAGTGCTTCAACGACACTCCCGTCTAAAGGTCAGACAATAGATGTCAAGGATGACTCGTCAGTGCTGAAGAGAATTGGATGCTGCTCCAGCTGA

Protein sequence

MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS*

Homology

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BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot
Match: Q40194 (Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 4.2e-105
Identity = 191/219 (87.21%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           M GY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+L +D K
Sbjct: 1   MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ VPTEDGKSFAERESLYFMETSAL+ATNVE+AFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           R+VEAGD GS S+ LPSKGQTI+VK+DSSVLKR GCCS+
Sbjct: 181 RAVEAGDSGS-SSGLPSKGQTINVKEDSSVLKRFGCCST 218

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BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot
Match: Q40195 (Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.4e-100
Identity = 185/219 (84.47%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK  DEYDYLFKLVLIGDSGVGKSNLLSRFTRN+FNLESKSTIGVEFATKSL IDGK
Sbjct: 1   MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFE A RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ V TEDGK+FAE+ESLYFMETSAL+ATNVE+AF+EVL+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           R+VEAGD  S S  +PS+GQTI+V +DSSVL R  CCS+
Sbjct: 181 RAVEAGDRPSTS-VVPSQGQTINVNEDSSVLNRYRCCSN 218

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BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot
Match: P28185 (Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.0e-98
Identity = 176/219 (80.37%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSV   D G  S  LP KG+TI+VK+D SVLKR+GCCS+
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCSN 216

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BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot
Match: Q01111 (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.7e-96
Identity = 174/219 (79.45%), Postives = 195/219 (89.04%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATKSL ID K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  T+EN  RWLKELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNK DLRHL+ V T++ K  AERE LYFMETSAL+ATNVE+AFTE L+QIYRIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           ++VEAGD G A+++ P KG+TI++KD+ S  K+ GCCSS
Sbjct: 181 KAVEAGDEG-ATSSAPPKGETINIKDEGSSWKKFGCCSS 218

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BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot
Match: P40393 (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 4.0e-95
Identity = 170/217 (78.34%), Postives = 195/217 (89.86%), Query Frame = 0


Query: 2   AGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKV 61
           AGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL++DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVV 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTDPN+VV
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKR 181
           ML+GNK DLRHL+ V T++GK+FAERESLYFMETSAL++TNVE+AF EVL+QIYRIVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 SVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCS 219
           SVEAGD   +    P KG+ I++KDD S +K+ GCCS
Sbjct: 183 SVEAGDDAGSG---PGKGEKINIKDDVSAVKKGGCCS 216

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BLAST of CsGy7G004380 vs. NCBI nr
Match: XP_004136835.1 (ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Csa_017337 [Cucumis sativus])

HSP 1 Score: 435 bits (1119), Expect = 7.70e-154
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. NCBI nr
Match: KAA0031553.1 (ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related protein Rab11D [Cucumis melo var. makuwa])

HSP 1 Score: 433 bits (1113), Expect = 6.33e-153
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSAS TLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

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BLAST of CsGy7G004380 vs. NCBI nr
Match: XP_008455291.1 (PREDICTED: ras-related protein Rab11D [Cucumis melo])

HSP 1 Score: 429 bits (1102), Expect = 3.01e-151
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSAS TLP KGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. NCBI nr
Match: XP_038888615.1 (ras-related protein Rab11D [Benincasa hispida])

HSP 1 Score: 426 bits (1095), Expect = 3.51e-150
Identity = 213/219 (97.26%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYK HDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKAHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIV K
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVCK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVE GDIGSASTTLP++GQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVETGDIGSASTTLPARGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. NCBI nr
Match: XP_023553765.1 (ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1082), Expect = 3.37e-148
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEA DIGSAS TLPSKGQTIDVKDDSS+L++IGCCSS
Sbjct: 181 RSVEASDIGSASMTLPSKGQTIDVKDDSSILRKIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL
Match: A0A0A0K737 (Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 3.73e-154
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL
Match: A0A5A7SMX1 (Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003220 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 3.06e-153
Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSAS TLPSKGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPSKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL
Match: A0A1S3C059 (ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1)

HSP 1 Score: 429 bits (1102), Expect = 1.46e-151
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELR+HTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRNHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+LVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLVLVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEAGDIGSAS TLP KGQTIDVKDDSSVLKRIGCCSS
Sbjct: 181 RSVEAGDIGSASMTLPPKGQTIDVKDDSSVLKRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL
Match: A0A6J1GMB1 (ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE=4 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 9.44e-148
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVLSQIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLSQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEA D GSAS TLP+KGQTIDVKDDSS+L+RIGCCSS
Sbjct: 181 RSVEASDSGSASVTLPTKGQTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL
Match: A0A6J1I228 (ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 3.85e-147
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSL+IDGK
Sbjct: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLDIDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFENAARWLKELRDHTDPNMV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAARWLKELRDHTDPNMV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHLILVPTEDG+SFAERESLYFMETSALDATNVE+AFTEVL+QIYRIVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGQSFAERESLYFMETSALDATNVETAFTEVLNQIYRIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
           RSVEA D GSAS TLPSKG+TIDVKDDSS+L+RIGCCSS
Sbjct: 181 RSVEASDSGSASVTLPSKGKTIDVKDDSSILRRIGCCSS 219

[Close]

BLAST of CsGy7G004380 vs. TAIR 10
Match: AT1G06400.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 358.6 bits (919), Expect = 3.6e-99
Identity = 176/219 (80.37%), Postives = 200/219 (91.32%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATK+ +++GK
Sbjct: 1   MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTR  TFENAARWL+ELR HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VMLIGNKCDLRHL+ V TE+ K+FAERESLYFMETSALDATNVE+AFTEVL+QI++IVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           RSV   D G  S  LP KG+TI+VK+D SVLKR+GCCS+
Sbjct: 181 RSV---DGGGESADLPGKGETINVKEDGSVLKRMGCCSN 216

[Close]

BLAST of CsGy7G004380 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 347.8 bits (891), Expect = 6.3e-96
Identity = 170/219 (77.63%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT++L++DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRR TFEN  RWLKEL++HTDPN+V
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ VPTEDGKS+AE+ESL FMETSAL+ATNVE AF EVL+QIYRI SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           + VEAG+ G+AS     KG+ I+VK+D S LK++GCCS+
Sbjct: 181 KQVEAGEDGNASV---PKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of CsGy7G004380 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 334.7 bits (857), Expect = 5.5e-92
Identity = 166/219 (75.80%), Postives = 190/219 (86.76%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  DEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LESKSTIGVEFAT+SL +D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN   WLKELR+HTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ V TED KSFAE+ESLYFMETSAL+ATNVE+AF EVL+QI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           +++EA    S S  +PSKG  ID+  D S +K+ GCCS+
Sbjct: 181 KAMEA---ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of CsGy7G004380 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 334.3 bits (856), Expect = 7.2e-92
Identity = 166/219 (75.80%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MAGY+  D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+SL ++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWL+ELRDHTDPN+V
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           VML+GNK DLRHL+ V TED KSFAE ESLYFMETSAL++TNVE+AF+EVL+QIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 220
           +++EAG+    S  +PSKG+ IDV  D S +K+ GCCS+
Sbjct: 181 KAMEAGE---DSGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of CsGy7G004380 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 325.9 bits (834), Expect = 2.6e-89
Identity = 162/221 (73.30%), Postives = 190/221 (85.97%), Query Frame = 0


Query: 1   MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
           MA Y+  DEYDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ +D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR  TFEN  RWLKELRDHTD N+V
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
           +M +GNK DLRHL  V TED K+FAERE+ +FMETSAL++ NVE+AFTEVLSQIYR+VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 RSVEAGDIGSASTTLPSKGQTIDV--KDDSSVLKRIGCCSS 220
           +++   DIG     LP KGQTI+V  KDD S +K++GCCS+
Sbjct: 181 KAL---DIGDDPAALP-KGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of CsGy7G004380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40194	4.2e-105	87.21	Ras-related protein Rab11D OS=Lotus japonicus OX=34305 GN=RAB11D PE=2 SV=1	[more]
Q40195	5.4e-100	84.47	Ras-related protein Rab11E OS=Lotus japonicus OX=34305 GN=RAB11E PE=2 SV=1	[more]
P28185	5.0e-98	80.37	Ras-related protein RABA1a OS=Arabidopsis thaliana OX=3702 GN=RABA1A PE=1 SV=1	[more]
Q01111	4.7e-96	79.45	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia OX=4092 GN=YPT3 PE=2 SV=1	[more]
P40393	4.0e-95	78.34	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC2 PE=2 S...	[more]

BLAST of CsGy7G004380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136835.1	7.70e-154	100.00	ras-related protein Rab11D [Cucumis sativus] >KGN43636.1 hypothetical protein Cs...	[more]
KAA0031553.1	6.33e-153	99.54	ras-related protein Rab11D [Cucumis melo var. makuwa] >TYK07006.1 ras-related pr...	[more]
XP_008455291.1	3.01e-151	98.17	PREDICTED: ras-related protein Rab11D [Cucumis melo]	[more]
XP_038888615.1	3.51e-150	97.26	ras-related protein Rab11D [Benincasa hispida]	[more]
XP_023553765.1	3.37e-148	95.89	ras-related protein Rab11D-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy7G004380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K737	3.73e-154	100.00	Small GTP-binding protein OS=Cucumis sativus OX=3659 GN=Csa_7G049180 PE=4 SV=1	[more]
A0A5A7SMX1	3.06e-153	99.54	Ras-related protein Rab11D OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3C059	1.46e-151	98.17	ras-related protein Rab11D OS=Cucumis melo OX=3656 GN=LOC103495492 PE=4 SV=1	[more]
A0A6J1GMB1	9.44e-148	95.43	ras-related protein Rab11D-like OS=Cucurbita moschata OX=3662 GN=LOC111455574 PE...	[more]
A0A6J1I228	3.85e-147	94.98	ras-related protein Rab11D-like OS=Cucurbita maxima OX=3661 GN=LOC111468314 PE=4...	[more]

BLAST of CsGy7G004380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06400.1	3.6e-99	80.37	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	6.3e-96	77.63	RAB GTPase homolog A1B	[more]
AT5G45750.1	5.5e-92	75.80	RAB GTPase homolog A1C	[more]
AT4G18800.1	7.2e-92	75.80	RAB GTPase homolog A1D	[more]
AT5G60860.1	2.6e-89	73.30	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 152..174 score: 41.19 coord: 14..35 score: 56.68 coord: 55..77 score: 55.43 coord: 117..130 score: 50.41 coord: 37..53 score: 35.85
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.7E-26 score: 104.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..211 e-value: 7.3E-5 score: 20.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 2.6E-110 score: 382.5
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..219
None	No IPR available	PANTHER	PTHR47979:SF27	RAS-RELATED PROTEIN RIC2	coord: 1..219
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..178 score: 9.554386
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..217 score: 35.392815
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 3.4107E-127 score: 354.174
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 4.6E-12 score: 34.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 7.1E-61 score: 204.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..211 score: 16.242884
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 7..217 e-value: 7.0E-70 score: 236.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..181
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.3E-38 score: 129.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G004380.2	CsGy7G004380.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding