CsGy7G003910 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G003910
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionWound-responsive family protein
LocationGy14Chr7: 2956732 .. 2957557 (+)
RNA-Seq ExpressionCsGy7G003910
SyntenyCsGy7G003910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAACTATATGAACAGTGTAATGGAAACACCATGAGTCATATCCGATGCTATCTCAACATTGACACGCACTACAAAGTGAAGTAGCAATCTGATCTCTATGAGTAAAAAAAACTAAAAACAAATAAACAAACAGTATGGTATAACGTGATAGTAAAGTAAAGTAGAGTCCATCCATCCAGATACAGTGGATGTATGATAAAAAAAACAAAAACAGTATAAAGTTATGAATCCAATTCCAAGGAGGAAATTTGTCACTTGCAGTGGTTTTTCAAACCCCAAACTCTACCCCTCCACTCTCCACGTGTTTCTGAAAAACAAAACAAAACCAGGGGGCGCGATTTTCCCATCTATAATAATCTAATCTATTACAGTTCTATATATAATGAGCAAATCCCAATTCATTTTCAAGCATCCAAAATTCAAAAAGACACAAATCAACACACACAGATACCAAAAAAATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCCGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGATCGTTCCACATCACATATACCTTTTTTCTTTACTCTATTAGATTACTGTTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATC

mRNA sequence

ACAAACTATATGAACAGTGTAATGGAAACACCATGAGTCATATCCGATGCTATCTCAACATTGACACGCACTACAAAGTGAAGTAGCAATCTGATCTCTATGAGTAAAAAAAACTAAAAACAAATAAACAAACAGTATGGTATAACGTGATAGTAAAGTAAAGTAGAGTCCATCCATCCAGATACAGTGGATGTATGATAAAAAAAACAAAAACAGTATAAAGTTATGAATCCAATTCCAAGGAGGAAATTTGTCACTTGCAGTGGTTTTTCAAACCCCAAACTCTACCCCTCCACTCTCCACGTGTTTCTGAAAAACAAAACAAAACCAGGGGGCGCGATTTTCCCATCTATAATAATCTAATCTATTACAGTTCTATATATAATGAGCAAATCCCAATTCATTTTCAAGCATCCAAAATTCAAAAAGACACAAATCAACACACACAGATACCAAAAAAATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCCGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGATCGTTCCACATCACATATACCTTTTTTCTTTACTCTATTAGATTACTGTTGTGTATATGTATATATATCCACTTCAATTCAAAATCAATGGAAGAGTTTTTCTTAATC

Coding sequence (CDS)

ATGAGTTGTTGCAGAAAAGGTTGGGTTGTAGCTGCAAGTGTTGGAGTGGTGGAGGCTTTGAAAGATCAAGGGATTTGCCGATGGAATCATACCATTAGATCGCTTCAACAATACGCTAAAAATCATGTTCGATCCATTTCTCAGGCTAAGAAGCTTTCTTCTCCCTCCGCAGCCGCGGTTTCCGATCACAAATGGAACCAATCCGAGGAATCTTTGAGAACTGTCATGTACTTGAGCTGTTGGGGCCCCAATAACTGA

Protein sequence

MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAVSDHKWNQSEESLRTVMYLSCWGPNN*
Homology
BLAST of CsGy7G003910 vs. NCBI nr
Match: XP_004136809.1 (uncharacterized protein LOC101202743 [Cucumis sativus])

HSP 1 Score: 180 bits (457), Expect = 3.05e-57
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. NCBI nr
Match: KAA0031602.1 (uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa] >TYK07054.1 uncharacterized protein E5676_scaffold13G003720 [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (438), Expect = 2.42e-54
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. NCBI nr
Match: XP_008455355.1 (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 171 bits (434), Expect = 9.89e-54
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. NCBI nr
Match: XP_038888492.1 (uncharacterized protein LOC120078325 [Benincasa hispida])

HSP 1 Score: 164 bits (416), Expect = 5.52e-51
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC R+ WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRS+SQA+KLSSPSA AV
Sbjct: 1  MSCSRRAWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSVSQARKLSSPSATAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 hypothetical protein SDJN03_29066, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011949.1 hypothetical protein SDJN02_26857, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (402), Expect = 7.56e-49
Identity = 74/85 (87.06%), Postives = 79/85 (92.94%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSSPS AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. ExPASy TrEMBL
Match: A0A0A0K3P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 1.48e-57
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDHKWNQSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. ExPASy TrEMBL
Match: A0A5D3C714 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003720 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 1.17e-54
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. ExPASy TrEMBL
Match: A0A1S3C0Q4 (uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 4.79e-54
Identity = 81/85 (95.29%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MSC RKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAA V
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SDH+W QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. ExPASy TrEMBL
Match: A0A6J1GJQ8 (uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC111454919 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 2.12e-48
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNH I+S+QQYAKNHVRS+SQAKKLSSPS AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 6.09e-48
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60
          MS  R+ WVVAASVGVVEALKDQG+CRWNHTI+S+QQYAKNHVRS+SQAKKLSS S AAV
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85
          SD KW QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDQKWKQSEESLRTVMYLSCWGPNN 85

BLAST of CsGy7G003910 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W+VAAS+G VEALKDQ G+CRWN+ IRS  QY +N++RS+SQAKKLSS S   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 VSDHKWNQSEESLRTVMYLSCWGPN 85
             +K  Q+EESLRTVMYLSCWGP+
Sbjct: 61 T--NKTKQAEESLRTVMYLSCWGPS 83

BLAST of CsGy7G003910 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 104.0 bits (258), Expect = 6.2e-23
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 0

Query: 1  MSCCRKGWVVAASVGVVEALKDQ-GICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAA 60
          MS   K W VA S+G VEALKDQ G+CRWN+ +RS+ Q+ +N+VRS+SQ K+ SS S +A
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 V-----SDHKWNQSEESLRTVMYLSCWGPN 85
                   K  ++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

BLAST of CsGy7G003910 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = 0

Query: 8  WVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSP----SAAAVSDH 67
          W VA ++  VE LKDQG+ RWN+  R L + A   VR+I+   + S P    SA ++   
Sbjct: 9  WAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSK 68

Query: 68 KWNQS--EESLRTVMYLSCWGP 84
            + +  E S    M LSC+GP
Sbjct: 69 PLSTTPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_004136809.13.05e-57100.00uncharacterized protein LOC101202743 [Cucumis sativus][more]
KAA0031602.12.42e-5496.47uncharacterized protein E6C27_scaffold139G003700 [Cucumis melo var. makuwa] >TYK... [more]
XP_008455355.19.89e-5495.29PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo][more]
XP_038888492.15.52e-5190.59uncharacterized protein LOC120078325 [Benincasa hispida][more]
XP_023554652.17.56e-4987.06uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K3P51.48e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046670 PE=4 SV=1[more]
A0A5D3C7141.17e-5496.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C0Q44.79e-5495.29uncharacterized protein LOC103495542 OS=Cucumis melo OX=3656 GN=LOC103495542 PE=... [more]
A0A6J1GJQ82.12e-4885.88uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC1114549... [more]
A0A6J1HXF96.09e-4885.88uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355... [more]
Match NameE-valueIdentityDescription
AT4G10265.11.9e-2464.71Wound-responsive family protein [more]
AT4G10270.16.2e-2356.67Wound-responsive family protein [more]
AT4G33560.12.5e-0837.80Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 10..83
e-value: 8.4E-33
score: 113.2
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..84
NoneNo IPR availablePANTHERPTHR33090:SF50FAMILY PROTEIN, PUTATIVE-RELATEDcoord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G003910.1CsGy7G003910.1mRNA