CsGy7G003900 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G003900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Wound-responsive family protein
Location	Gy14Chr7: 2954965 .. 2955458 (+)
RNA-Seq Expression	CsGy7G003900
Synteny	CsGy7G003900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAAGATCGCAAAACTTTGATAATTGAAGGGGAAAAAAAAAAAGAAAAGAAAAGAATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTAGGCGTGGTGGAAGCATTAAAGGATCAAGGGATTTGCCGATGGAATCACACCATTAGATCGGCGCATCAATATGCTAAAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGCTCCTCCGCCGCCGTGGTTTCCAGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTGAGAACTGTCATGTATTTGAGCTGTTGGGGTCCCAACTAAAGTCCCCTTTTGTTCAAGATTTAGAGTCTGATGCTAAAATCAGCCGCCGCCAGAGAGGATCTCGGCGAGGCTTTATAATTCCCTCTTGAACCACAGTGGGGTTGGGCGAAAAAAATCGCCGGTAGGGAGTTTGGTACTGTAGCGATTGTATATGAATTGGGTATTTGGTGTCAATGGAAA

mRNA sequence

TCGAAGATCGCAAAACTTTGATAATTGAAGGGGAAAAAAAAAAAGAAAAGAAAAGAATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTAGGCGTGGTGGAAGCATTAAAGGATCAAGGGATTTGCCGATGGAATCACACCATTAGATCGGCGCATCAATATGCTAAAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGCTCCTCCGCCGCCGTGGTTTCCAGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTGAGAACTGTCATGTATTTGAGCTGTTGGGGTCCCAACTAAAGTCCCCTTTTGTTCAAGATTTAGAGTCTGATGCTAAAATCAGCCGCCGCCAGAGAGGATCTCGGCGAGGCTTTATAATTCCCTCTTGAACCACAGTGGGGTTGGGCGAAAAAAATCGCCGGTAGGGAGTTTGGTACTGTAGCGATTGTATATGAATTGGGTATTTGGTGTCAATGGAAA

Coding sequence (CDS)

ATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTAGGCGTGGTGGAAGCATTAAAGGATCAAGGGATTTGCCGATGGAATCACACCATTAGATCGGCGCATCAATATGCTAAAAACCATGTCAGATCGGTGCCTCAGGCCACTAGATTGACTGGCTCCTCCGCCGCCGTGGTTTCCAGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTGAGAACTGTCATGTATTTGAGCTGTTGGGGTCCCAACTAA

Protein sequence

MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVVSSKQQQKQSEESLRTVMYLSCWGPN*

Homology

[Close]

BLAST of CsGy7G003900 vs. NCBI nr
Match: XP_011658732.1 (uncharacterized protein LOC101213259 [Cucumis sativus])

HSP 1 Score: 171 bits (434), Expect = 9.89e-54
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          SSKQQQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of CsGy7G003900 vs. NCBI nr
Match: XP_008455356.1 (PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo] >KAA0031603.1 Wound-responsive family protein [Cucumis melo var. makuwa] >TYK07055.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 2.34e-52
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          SSK QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of CsGy7G003900 vs. NCBI nr
Match: XP_038888463.1 (uncharacterized protein LOC120078299 [Benincasa hispida])

HSP 1 Score: 165 bits (418), Expect = 2.74e-51
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYAKNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          S KQQQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SGKQQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of CsGy7G003900 vs. NCBI nr
Match: XP_022969311.1 (uncharacterized protein LOC111468355 [Cucurbita maxima])

HSP 1 Score: 138 bits (347), Expect = 1.86e-40
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +L+ +S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 SD-QKWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of CsGy7G003900 vs. NCBI nr
Match: XP_023554652.1 (uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 hypothetical protein SDJN03_29066, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011949.1 hypothetical protein SDJN02_26857, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (345), Expect = 3.76e-40
Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +L+  S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 SD-QKWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL
Match: A0A5D3C6J9 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003730 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.13e-52
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          SSK QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL
Match: A0A1S3C1F8 (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.13e-52
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          SSK QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

[Close]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL
Match: A0A0A0K296 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 5.43e-44
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SSKQQQKQSEESLRT 75
          SSKQQQKQSEESLRT
Sbjct: 61 SSKQQQKQSEESLRT 75

[Close]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 9.01e-41
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +L+ +S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 SD-QKWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL
Match: A0A6J1GJQ8 (uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC111454919 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 1.05e-39
Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWNH I+S  QYAKNHVRSV QA +L+  S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SSKQQQKQSEESLRTVMYLSCWGPN 85
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 SD-QKWKQSEESLRTVMYLSCWGPN 84

[Close]

BLAST of CsGy7G003900 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-24
Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAV 60
          MSS+ + W+VAAS+G VEALKDQ G+CRWN+ IRSA+QY +N++RSV QA +L+ SS   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSS--- 60

Query: 61 VSSKQQQKQSEESLRTVMYLSCWGPN 86
          +    + KQ+EESLRTVMYLSCWGP+
Sbjct: 61 IDYTNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of CsGy7G003900 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23
Identity = 55/90 (61.11%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLTGS--SA 60
          MSS+ +AW VA S+G VEALKDQ G+CRWN+ +RS +Q+ +N+VRSV Q  R + S  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 AVVSS--KQQQKQSEESLRTVMYLSCWGPN 86
          AV SS   ++ K++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of CsGy7G003900 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-08
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 2  SSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATR----LTGSSA 61
          +  + +W VA ++  VE LKDQG+ RWN+  R  H+ A   VR++   +R     + SSA
Sbjct: 3  AGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSA 62

Query: 62 AVVSSKQ-QQKQSEESLRTVMYLSCWGP 85
            + SK       E S    M LSC+GP
Sbjct: 63 TSIRSKPLSTTPFETSFEKAMGLSCFGP 90

The following BLAST results are available for this feature:

BLAST of CsGy7G003900 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G003900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658732.1	9.89e-54	100.00	uncharacterized protein LOC101213259 [Cucumis sativus]	[more]
XP_008455356.1	2.34e-52	97.65	PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo] >KAA0031603.1 Wou...	[more]
XP_038888463.1	2.74e-51	96.47	uncharacterized protein LOC120078299 [Benincasa hispida]	[more]
XP_022969311.1	1.86e-40	80.00	uncharacterized protein LOC111468355 [Cucurbita maxima]	[more]
XP_023554652.1	3.76e-40	80.00	uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo] >KAG6572338.1 ...	[more]

BLAST of CsGy7G003900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C6J9	1.13e-52	97.65	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1F8	1.13e-52	97.65	uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=...	[more]
A0A0A0K296	5.43e-44	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1	[more]
A0A6J1HXF9	9.01e-41	80.00	uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355...	[more]
A0A6J1GJQ8	1.05e-39	78.82	uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC1114549...	[more]

BLAST of CsGy7G003900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	3.3e-24	61.63	Wound-responsive family protein	[more]
AT4G10270.1	2.1e-23	61.11	Wound-responsive family protein	[more]
AT4G33560.1	1.5e-08	36.36	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..84 e-value: 1.2E-32 score: 112.7
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..85
None	No IPR available	PANTHER	PTHR33090:SF50	FAMILY PROTEIN, PUTATIVE-RELATED	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003900.1	CsGy7G003900.1	mRNA