CsGy7G002445 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G002445
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr7: 2019404 .. 2020839 (-)
RNA-Seq ExpressionCsGy7G002445
SyntenyCsGy7G002445
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAAGAAGCGGAAGCTTGTGCGTTACCAAACAACGGCCTTAGAATATGCTCTTAGCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGTATTTGACGGCTGTGATTGATTTCTAGCGGAATTCTGTGCTTCCACCTCAAATTACTACACCTTTGTGATTTTCTAGGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGTAGAGCTTTTTTCCCTTTCTCATGTCTAACTCAATATTATTGTTGTAAATTTTTTTTTTGGGGGGAGGGAGATAACAGATAAGTATGTGGATATTTTTCTCTTGTTTCTGAAATTGAAGGCGGAGTTTTGTGATTTGGATCTTAATTATTTTGATCCGTACTGGAGCCGGAGAATCTAGTTACTCAGCTCAAGCTGAGCCTACTTGGTCCGTATGTTTTGGATGAAATTAGTAGCTAATTCTTTTTCTTCTCTTTATAAGCTTTAGTTGGAGTGAGAGTTTTACTTTGAACACCATTGTTTCTTTGTTCGCCTCGAAGATTTCATCGGATGGTGTGCAAGTGGTGGATTATTGTGCACTGAATTCGATTTCCATGTCTATTCTTTTTTCTATTAAAAAATTTTGGTTATTAATTGAGAATGAAGATTATTTCCATGTATTGAATAATATATATCTTATCCCACTTCCCGAAACTTTTAAATGTTCAATATTTTGATTTTAGTACGGTATATTTTCGAAGTCAATCCTTCTTCTATATTGTAAATTATAGTAGTCTGAATCAACTCTGACACTCTAGTTTCCATTTTTTTTTTTTGGGGAGGGGGGGTTCTTGGGCTAAACTGAAATTTCCACTTTTCATGCGTACAAACACATTTTCATATTAGAAACAGCTTGGGGTTATATAATGCATGAATTTGGGGATGCTGAGTATGCATGAAATCTTCACGTTTTCTTTATGACCATGACTATGAAGTTTGAAGTAAATTGTCTACGCACACAATGACACGATCATTCTCGAATAATATTAATAAATTGTTTGTTTGATATCTGGCCTCTTGAATTTTGATTATATGGAGGTAGTCCAAAATGACTTTTAGCAATTTTCCATTTTGTTGCATTTCTTACCAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

mRNA sequence

ATGGCATTAAGAAGCGGAAGCTTCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

Coding sequence (CDS)

ATGGCATTAAGAAGCGGAAGCTTCTGTTATCAACTTTACCGGGAACTTCATCGGAGCCGGAGCACCAATCACTGCTTCTCAACTCTAACCATTTCAATTCCTTCTCTCTCTATCTTCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCCTCTTCCCGGTATCTTCTCTCTTTTCTTCTTCATCGGAGCTTCAATTTGACTTCAATTTCTTTGTCTCCTTACCCACTTCCCTCGTCTTCTGCACCTCTGATTCGCCTGCTCCAATTCCGAACCCGGACTTGGCTTCAAACTCCAAGCCTTTGGCACTGAACCGGAGGATTCAGTATACAGCTAGACGTGACGTGGGATCCAGTTTCTGTGTCAATCAAATTGTGGAGAATAAGAGTTCTTTAGAGCTCTCTGGTTTATGA

Protein sequence

MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSSSSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFCVNQIVENKSSLELSGL*
Homology
[Close]
BLAST of CsGy7G002445 vs. NCBI nr
Match: KGN43428.1 (hypothetical protein Csa_020467 [Cucumis sativus])

HSP 1 Score: 258 bits (659), Expect = 1.98e-86
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60
           MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS
Sbjct: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60

Query: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120
           SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC
Sbjct: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120

Query: 121 VNQIVENKSSLELSGL 136
           VNQIVENKSSLELSGL
Sbjct: 121 VNQIVENKSSLELSGL 136

[Close]
BLAST of CsGy7G002445 vs. ExPASy TrEMBL
Match: A0A0A0K1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G033360 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 9.59e-87
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60
           MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS
Sbjct: 1   MALRSGSFCYQLYRELHRSRSTNHCFSTLTISIPSLSIFFFFFFLLLFFFLFPVSSLFSS 60

Query: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120
           SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC
Sbjct: 61  SSELQFDFNFFVSLPTSLVFCTSDSPAPIPNPDLASNSKPLALNRRIQYTARRDVGSSFC 120

Query: 121 VNQIVENKSSLELSGL 136
           VNQIVENKSSLELSGL
Sbjct: 121 VNQIVENKSSLELSGL 136

The following BLAST results are available for this feature:
BLAST of CsGy7G002445 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy7G002445 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43428.11.98e-86100.00hypothetical protein Csa_020467 [Cucumis sativus][more]
BLAST of CsGy7G002445 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1U79.59e-87100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G033360 PE=4 SV=1[more]
BLAST of CsGy7G002445 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G002445.1CsGy7G002445.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane