CsGy7G002093 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G002093
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type domain-containing protein
Location	Gy14Chr7: 1747489 .. 1749187 (+)
RNA-Seq Expression	CsGy7G002093
Synteny	CsGy7G002093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGAAATCCCACGTTGCAAGGTACCCGTTTATTTTAAAGCTAAGGCACAACTCATCAGATATATATTGTATTTTGTTTAGAGGAGTATGGATGATTTGGTCGGTATTATTCTATCTTGAACTGCAAGTTTAGTCAAAACCTGGGAAGGGAGGTGGATTCTCTTGTTTCCTTATTGTTAATTGTTATTAGAAGTGAAATATTAAGATATGAATGGAAGATTTTGGTATCTCATGTGAATATTTTAGATACTTGAGGCATTGACTAACTTATGAAGTATTGAGTGCAATGTGGGGTCGGCGCCGGCCCTCCTTTCCAGCCGGAATCATGGTTCTAACACACTAAAATATTAACAAACGCATTGGATTTTAGGAAATCTTCTCCTTACGAGTTTTGAGATCCTTTTTTTCCTTTTTATTTTACAAAAAGTTCAATAACAACATGTGAGAGGTGAGTGAAAGTGGTGATTTAAACCTTTGACTTTTGATCAATAGTTATCTAGTTGAGCTATTGTTGGTAGAATTTTGAGGTTAGTAGAGATATTTTACCTTTCTAATTATTAATTATTAAATTTATAGGCTTTACAAATTTAAGTACATTAAATCAATCATTTGCATTATTGCACACTTGACTTTACAAACAATAAACTCTTTTCTAAGCACAAGCCGATAGGGGTGTTCACATTCATTTTGGTTTGGCAACCAAACCAAACCGAAAATTTTAGTTTTGGATACACACCAAACCGGATCGATTATTTGGTTGGAACCTTAAATATTTTATCTGATTTTCTTCTATTAGCATACAGTAAATTTATGTACTTTGGTTCCACTTTTAGCATCATATAAACAATTCAGTTTGGTTTACAAATCCAAAAACCAATCAAACAAAATTTTGATTTTCTTACAATTTAAAATCTAATTGAACCAACTTCAGTTAAAAATGAATTTCTGATTCGATTCAATTTGATTTGATTGCATGGAGTAAACAACCCTACAAGCAGGTAGATTTATTAGCACAGAGTCAGGTTGTTGGGTACAGCAAGATTAGTCAGTAATATATGGTTTTTCATCTTTACAAATATAAAATTAAGCTTTGCAAACCCAATATTTATAAATCCCATAATATATTATGAGTCAAATATCCTTGATTGGTTATATTCCTCCAAAAGTCAAGGCCTGAAGTCAACCACCACCTGAATATGGTAAGCCAAGTTTGTACTATAAAAATGCCTTTGCTTCTTCCATTTTTCAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGA

mRNA sequence

ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGA

Coding sequence (CDS)

ATGAGAAAGAAATCCCACGTTGCAAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGA

Protein sequence

MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL*

Homology

[Close]

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot
Match: Q9SZL4 (RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 49/127 (38.58%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 88
           MI M   R  +  A IVF TCV IPL +LK                    A       L+
Sbjct: 1   MISMLFPRSPLCTAAIVFYTCVCIPLGRLKKNGGD-------------ADAHDDDGYNLV 60

Query: 89  VCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLC 148
              F + ++    EE  C +CL EF  E  V+ L RC+H+FH+ CIE WL R   TCPLC
Sbjct: 61  GVMFGDKEK---EEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLC 111

Query: 149 RSFIFQP 156
           RSF+  P
Sbjct: 121 RSFVLAP 111

[Close]

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 87  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCP 146
           L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCP
Sbjct: 75  LPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCP 134

Query: 147 LCRS 151
           LCR+
Sbjct: 135 LCRT 138

[Close]

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 106 CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP 156
           C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNS-TCPLCRGTLFSP 191

[Close]

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot
Match: Q9FHG8 (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 106 CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR 150
           C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNS-TCPLCR 164

[Close]

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 0


Query: 77  TTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIES 136
           T+A+L  E+ + V RF +L   +   E+ C+VCL++F  +  + QL +C HVFH  C++ 
Sbjct: 60  TSATLANEL-IPVVRFSDL---LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDR 119

Query: 137 WL-QRNQFTCPLCRS 151
           W+   N+ TCP+CR+
Sbjct: 120 WIVDCNKITCPICRN 130

[Close]

BLAST of CsGy7G002093 vs. NCBI nr
Match: KAE8645705.1 (hypothetical protein Csa_020389 [Cucumis sativus])

HSP 1 Score: 216 bits (550), Expect = 2.86e-67
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 9   RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL 68
           RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL
Sbjct: 18  RNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL 77

Query: 69  SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLV 119
           SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHL+
Sbjct: 78  SGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLL 128

[Close]

BLAST of CsGy7G002093 vs. NCBI nr
Match: KAA0050549.1 (AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa])

HSP 1 Score: 142 bits (359), Expect = 3.98e-39
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 39  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRA 98
           MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT   PCEVKLLVCRFEELQR 
Sbjct: 1   MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTTV--PCEVKLLVCRFEELQRG 60

Query: 99  VGSEEEICSVCLTEFTREHLV 119
           VGSEEEICS+CLTEFTREHL+
Sbjct: 61  VGSEEEICSICLTEFTREHLI 79

[Close]

BLAST of CsGy7G002093 vs. NCBI nr
Match: XP_022762435.1 (RING-H2 finger protein ATL18-like [Durio zibethinus])

HSP 1 Score: 118 bits (295), Expect = 1.98e-30
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPC 88
           MI +      +S A ++F TCVWIP  QLK A+  +   +     +  +CQ++       
Sbjct: 1   MISLMCSNSDLSTAALIFYTCVWIPYLQLKKALLRVLGFVFPWYQAEESCQVMN------ 60

Query: 89  EVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTREHLVSQLHRCSHVFHLECIE 148
            V L V RFE+L+ + GS         EE+CS+CL EF +E +VSQLH+C H+FH+ CIE
Sbjct: 61  -VCLPVARFEDLKLSNGSRGSTNGEEVEEVCSICLVEFEKEDVVSQLHKCGHLFHMNCIE 120

Query: 149 SWLQRNQFTCPLCRSFIF 153
            WL R+QFTCPLCRSF+F
Sbjct: 121 KWLDRDQFTCPLCRSFLF 131

[Close]

BLAST of CsGy7G002093 vs. NCBI nr
Match: XP_030539517.1 (RING-H2 finger protein ATL18-like [Rhodamnia argentea])

HSP 1 Score: 116 bits (291), Expect = 4.36e-30
Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 0


Query: 36  RGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEEL 95
           +  +S A ++F TC+W+PL QL+ AIS +   +S   C+     S  C  +L V RF++L
Sbjct: 8   QSGVSTALLIFYTCMWLPLMQLRRAISRVRAFIS---CKYEPQES-SCSFQLPVGRFQDL 67

Query: 96  QRAVGSEEE------ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR 153
           Q+  G EEE       CS+CL ++  E LVS+LHRC HVFHL+CIE WL+R+QFTCPLCR
Sbjct: 68  QKPFGEEEEEGDHEKTCSICLVDYEGEDLVSKLHRCGHVFHLDCIERWLERSQFTCPLCR 127

[Close]

BLAST of CsGy7G002093 vs. NCBI nr
Match: TKY50666.1 (RING-H2 finger protein ATL18 [Spatholobus suberectus])

HSP 1 Score: 116 bits (291), Expect = 5.18e-30
Identity = 66/135 (48.89%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL----SGRTCQMLTTASLPCE 88
           MI + +CR  + + TIVF TC+ IP  QLK A+ SMF  L    S  T  M      P  
Sbjct: 1   MISLVVCRSRLWVVTIVFYTCILIPSMQLKRALVSMFGRLMIFFSYETKGMAKEMEFPEI 60

Query: 89  VKLLVCRFEELQ--RAVGSEE----EICSVCLTEFTREHLVSQLHRCSHVFHLECIESWL 148
             L V R+E+L+    VG E+    EICS+CL E+  E  VS+L RC HVFHL CIE W+
Sbjct: 61  PSLPVARYEDLRGHSCVGGEDGERDEICSICLVEYEGEDAVSELGRCGHVFHLNCIEQWI 120

Query: 149 QRNQFTCPLCRSFIF 153
            RNQF+CPLCRSF+F
Sbjct: 121 HRNQFSCPLCRSFLF 135

[Close]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL
Match: A0A0A0K513 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G029960 PE=4 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.64e-108
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAA 60
           MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAA
Sbjct: 1   MRKKSHVARNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAA 60

Query: 61  ISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVS 120
           ISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVS
Sbjct: 61  ISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLVS 120

Query: 121 QLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL 156
           QLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL
Sbjct: 121 QLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQPL 156

[Close]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL
Match: A0A5D3D5G1 (AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00010 PE=3 SV=1)

HSP 1 Score: 142 bits (359), Expect = 1.93e-39
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 39  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRA 98
           MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT   PCEVKLLVCRFEELQR 
Sbjct: 1   MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTTV--PCEVKLLVCRFEELQRG 60

Query: 99  VGSEEEICSVCLTEFTREHLV 119
           VGSEEEICS+CLTEFTREHL+
Sbjct: 61  VGSEEEICSICLTEFTREHLI 79

[Close]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL
Match: A0A6P6AC29 (RING-H2 finger protein ATL18-like OS=Durio zibethinus OX=66656 GN=LOC111308378 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 9.57e-31
Identity = 61/138 (44.20%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL-----SGRTCQMLTTASLPC 88
           MI +      +S A ++F TCVWIP  QLK A+  +   +     +  +CQ++       
Sbjct: 1   MISLMCSNSDLSTAALIFYTCVWIPYLQLKKALLRVLGFVFPWYQAEESCQVMN------ 60

Query: 89  EVKLLVCRFEELQRAVGSE--------EEICSVCLTEFTREHLVSQLHRCSHVFHLECIE 148
            V L V RFE+L+ + GS         EE+CS+CL EF +E +VSQLH+C H+FH+ CIE
Sbjct: 61  -VCLPVARFEDLKLSNGSRGSTNGEEVEEVCSICLVEFEKEDVVSQLHKCGHLFHMNCIE 120

Query: 149 SWLQRNQFTCPLCRSFIF 153
            WL R+QFTCPLCRSF+F
Sbjct: 121 KWLDRDQFTCPLCRSFLF 131

[Close]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL
Match: A0A0B2QNV8 (RING-H2 finger protein ATL18 OS=Glycine soja OX=3848 GN=D0Y65_053684 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 2.15e-29
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 35  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEE 94
           C+  + + TIVF TC+ IPL +LK A++SMF + S  T  M      P    L V R+E+
Sbjct: 7   CQSRLWVVTIVFYTCILIPLMKLKRALASMF-LFSCETKGMAKEMEFPEIPSLPVARYED 66

Query: 95  LQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFI 153
           L+     G ++EICS+CL E+  E  VS+L RC HVFHL CI+ W+ RNQF+CPLCRSF+
Sbjct: 67  LKGHNCDGEKQEICSICLVEYEGEDAVSKLGRCGHVFHLNCIDQWILRNQFSCPLCRSFL 126

[Close]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL
Match: K7N2N2 (RING-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_20G099800 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 2.15e-29
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0


Query: 35  CRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEE 94
           C+  + + TIVF TC+ IPL +LK A++SMF + S  T  M      P    L V R+E+
Sbjct: 7   CQSRLWVVTIVFYTCILIPLMKLKRALASMF-LFSCETKGMAKEMEFPEIPSLPVARYED 66

Query: 95  LQ--RAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFI 153
           L+     G ++EICS+CL E+  E  VS+L RC HVFHL CI+ W+ RNQF+CPLCRSF+
Sbjct: 67  LKGHNCDGEKQEICSICLVEYEGEDAVSKLGRCGHVFHLNCIDQWILRNQFSCPLCRSFL 126

[Close]

BLAST of CsGy7G002093 vs. TAIR 10
Match: AT4G38140.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 7.8e-16
Identity = 49/127 (38.58%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 29  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 88
           MI M   R  +  A IVF TCV IPL +LK                    A       L+
Sbjct: 1   MISMLFPRSPLCTAAIVFYTCVCIPLGRLKKNGGD-------------ADAHDDDGYNLV 60

Query: 89  VCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLC 148
              F + ++    EE  C +CL EF  E  V+ L RC+H+FH+ CIE WL R   TCPLC
Sbjct: 61  GVMFGDKEK---EEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLC 111

Query: 149 RSFIFQP 156
           RSF+  P
Sbjct: 121 RSFVLAP 111

[Close]

BLAST of CsGy7G002093 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 64.7 bits (156), Expect = 7.6e-11
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 87  LLVCRFEELQRAVGSEEEICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCP 146
           L V +FEEL  +     E C+VCL EF  E  +  L  C H+FH  C++ W+  +Q TCP
Sbjct: 75  LPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCP 134

Query: 147 LCRS 151
           LCR+
Sbjct: 135 LCRT 138

[Close]

BLAST of CsGy7G002093 vs. TAIR 10
Match: AT5G40250.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 9.9e-11
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 106 CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFIFQP 156
           C+VCL EF+ +  +  L  CSH FHL CI++WLQ N  TCPLCR  +F P
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNS-TCPLCRGTLFSP 191

[Close]

BLAST of CsGy7G002093 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 35/109 (32.11%), Postives = 54/109 (49.54%), Query Frame = 0


Query: 52  IPLSQLKAAISSMFDILSGRTCQMLTTASLP----CEVKLLVCRFEELQRAVGSEEE--- 111
           + ++ LK  + S+F I++  T   +     P       ++ + +F+ L   +  EEE   
Sbjct: 5   VSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEEEEKG 64

Query: 112 -ICSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCRSFI 153
             C VCL  F  E  VS+L  C H FH  C+++W   N  TCPLCRS +
Sbjct: 65  VECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSIL 113

[Close]

BLAST of CsGy7G002093 vs. TAIR 10
Match: AT5G57750.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 26/44 (59.09%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 106 CSVCLTEFTREHLVSQLHRCSHVFHLECIESWLQRNQFTCPLCR 150
           C+VCL EFT E  +  L +CSH FH+ECI++WL  N  TCPLCR
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNS-TCPLCR 164

The following BLAST results are available for this feature:

BLAST of CsGy7G002093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL4	1.1e-14	38.58	RING-H2 finger protein ATL18 OS=Arabidopsis thaliana OX=3702 GN=ATL18 PE=2 SV=1	[more]
Q9XF92	1.1e-09	43.75	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9FL07	1.4e-09	54.00	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1	[more]
Q9FHG8	1.5e-08	59.09	Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P...	[more]
Q9SUS5	2.6e-08	38.67	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ...	[more]

BLAST of CsGy7G002093 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645705.1	2.86e-67	99.10	hypothetical protein Csa_020389 [Cucumis sativus]	[more]
KAA0050549.1	3.98e-39	88.89	AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex...	[more]
XP_022762435.1	1.98e-30	44.20	RING-H2 finger protein ATL18-like [Durio zibethinus]	[more]
XP_030539517.1	4.36e-30	47.58	RING-H2 finger protein ATL18-like [Rhodamnia argentea]	[more]
TKY50666.1	5.18e-30	48.89	RING-H2 finger protein ATL18 [Spatholobus suberectus]	[more]

BLAST of CsGy7G002093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K513	1.64e-108	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G029960 P...	[more]
A0A5D3D5G1	1.93e-39	88.89	AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6P6AC29	9.57e-31	44.20	RING-H2 finger protein ATL18-like OS=Durio zibethinus OX=66656 GN=LOC111308378 P...	[more]
A0A0B2QNV8	2.15e-29	48.76	RING-H2 finger protein ATL18 OS=Glycine soja OX=3848 GN=D0Y65_053684 PE=4 SV=1	[more]
K7N2N2	2.15e-29	48.76	RING-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_20G099800 PE...	[more]

BLAST of CsGy7G002093 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38140.1	7.8e-16	38.58	RING/U-box superfamily protein	[more]
AT3G61460.1	7.6e-11	43.75	brassinosteroid-responsive RING-H2	[more]
AT5G40250.1	9.9e-11	54.00	RING/U-box superfamily protein	[more]
AT1G24580.1	1.7e-10	32.11	RING/U-box superfamily protein	[more]
AT5G57750.1	1.1e-09	59.09	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 106..148 e-value: 4.0E-5 score: 33.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 105..149 e-value: 5.7E-11 score: 42.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 106..149 score: 12.976127
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 91..155 e-value: 1.8E-16 score: 61.0
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 29..154
None	No IPR available	PANTHER	PTHR45969:SF9	ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN	coord: 29..154
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 99..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G002093.1	CsGy7G002093.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030121	AP-1 adaptor complex
molecular_function	GO:0035615	clathrin adaptor activity