CsGy7G001000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G001000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 1031557 .. 1031937 (-)
RNA-Seq Expression	CsGy7G001000
Synteny	CsGy7G001000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATAGTGGTAAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA

mRNA sequence

ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATAGTGGTAAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA

Coding sequence (CDS)

ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATAGTGGTAAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA

Protein sequence

MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIVVKKTDLAQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIPEEIDSF*

Homology

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BLAST of CsGy7G001000 vs. NCBI nr
Match: KGN43274.1 (hypothetical protein Csa_020212 [Cucumis sativus])

HSP 1 Score: 238 bits (607), Expect = 8.03e-79
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIK+V
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDL QVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 126
           EEIDSF
Sbjct: 121 EEIDSF 126

[Close]

BLAST of CsGy7G001000 vs. NCBI nr
Match: KAA0025124.1 (hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa] >TYK19366.1 hypothetical protein E5676_scaffold3037G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (531), Expect = 3.44e-67
Identity = 113/129 (87.60%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MIEGKQV SPNGTFRRLFRARCRKSAKAN LLEAIAKASREG GFVSHSEENGVVRIK+V
Sbjct: 1   MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDG---GGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQ 120
           VKKTDLAQVLEAMGGG G   GGG VA ASVS+E RL ++RRKQ LRAKLAAATWSPALQ
Sbjct: 61  VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120

Query: 121 SIPEEIDSF 126
           SIPEEIDSF
Sbjct: 121 SIPEEIDSF 129

[Close]

BLAST of CsGy7G001000 vs. NCBI nr
Match: XP_023511743.1 (uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197 bits (500), Expect = 1.61e-62
Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MI+GKQ ASPNG FRRLFRAR RK+AKA+ LLEAIAK SREG GFVS +EE+GVVRIK+V
Sbjct: 1   MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDLAQVLEAM GG GGGGV APASVS+E RL ++RRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLAQVLEAMAGGGGGGGV-APASVSVEQRLAIMRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 126
           EEIDSF
Sbjct: 121 EEIDSF 125

[Close]

BLAST of CsGy7G001000 vs. NCBI nr
Match: KAG6572129.1 (hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (480), Expect = 1.91e-59
Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MI+GKQ ASPNG FRRLFRAR RK+AKA+ LLEAIAK SREG GFVS +EE+GVVRIK+V
Sbjct: 1   MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDLAQVLEA+ GG GGGGV APASVS+EHRL ++RRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLAQVLEALAGGGGGGGV-APASVSVEHRLAIMRRKQFLRAKLAAATWSPALQSIP 120

[Close]

BLAST of CsGy7G001000 vs. NCBI nr
Match: PQQ02570.1 (hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 91.7 bits (226), Expect = 8.11e-21
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 29  NGLLEAIAKAS---REGAGFVSH-SEENGVVRIKIVVKKTDLAQVLEAMGGG-DGGGGVV 88
           N L+EAIAK +   +EG   +SH ++E+GVVR+KI+V++ DL QVLE M GG +    VV
Sbjct: 26  NALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQDLKQVLELMNGGINSQASVV 85

Query: 89  APASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQSIPEEI 123
            P+S+ +E RL++LR+K  LRA LAA     ++W PALQSIPEEI
Sbjct: 86  RPSSLCVEQRLSLLRKKHLLRASLAAKHSRQSSWRPALQSIPEEI 130

[Close]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL
Match: A0A0A0K2L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1)

HSP 1 Score: 238 bits (607), Expect = 3.89e-79
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIK+V
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDL QVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 126
           EEIDSF
Sbjct: 121 EEIDSF 126

[Close]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL
Match: A0A5A7SHL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00200 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 1.67e-67
Identity = 113/129 (87.60%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKIV 60
           MIEGKQV SPNGTFRRLFRARCRKSAKAN LLEAIAKASREG GFVSHSEENGVVRIK+V
Sbjct: 1   MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGGGDG---GGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQ 120
           VKKTDLAQVLEAMGGG G   GGG VA ASVS+E RL ++RRKQ LRAKLAAATWSPALQ
Sbjct: 61  VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120

Query: 121 SIPEEIDSF 126
           SIPEEIDSF
Sbjct: 121 SIPEEIDSF 129

[Close]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL
Match: A0A314YA00 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10648 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 3.92e-21
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 29  NGLLEAIAKAS---REGAGFVSH-SEENGVVRIKIVVKKTDLAQVLEAMGGG-DGGGGVV 88
           N L+EAIAK +   +EG   +SH ++E+GVVR+KI+V++ DL QVLE M GG +    VV
Sbjct: 26  NALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQDLKQVLELMNGGINSQASVV 85

Query: 89  APASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQSIPEEI 123
            P+S+ +E RL++LR+K  LRA LAA     ++W PALQSIPEEI
Sbjct: 86  RPSSLCVEQRLSLLRKKHLLRASLAAKHSRQSSWRPALQSIPEEI 130

[Close]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL
Match: A0A314Z8S5 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_20096 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.11e-20
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 29  NGLLEAIAKAS---REGAGFVSH-SEENGVVRIKIVVKKTDLAQVLEAMGGG-DGGGGVV 88
           N L+EAIAK +   +EG   +SH S+E+GVVR+KI+V++ DL QVLE   GG +    VV
Sbjct: 26  NALMEAIAKVNGDHQEGTNVLSHQSQEDGVVRMKILVRRQDLKQVLELTNGGINSQASVV 85

Query: 89  APASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQSIPEEI 123
            P+S+ +E RL++LR+K  LRA LAA     ++W PALQSIPEEI
Sbjct: 86  RPSSLCVEQRLSLLRKKHLLRASLAAKRSRQSSWRPALQSIPEEI 130

[Close]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL
Match: A0A6J5VPM4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51099 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.24e-20
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 29  NGLLEAIAKAS---REGAGFVSH-SEENGVVRIKIVVKKTDLAQVLEAMGGG--DGGGGV 88
           N L+EAIAK +   +EG   +SH ++E+GVVR+KI+V++ DL QVLE M GG  +     
Sbjct: 26  NALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQDLKQVLELMNGGGINNQASA 85

Query: 89  VAPASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQSIPEEI 123
           V P+S+ +E RL++LR+K  LRA LAA      +W PALQSIPEEI
Sbjct: 86  VRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQGSWCPALQSIPEEI 131

The following BLAST results are available for this feature:

BLAST of CsGy7G001000 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G001000 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43274.1	8.03e-79	98.41	hypothetical protein Csa_020212 [Cucumis sativus]	[more]
KAA0025124.1	3.44e-67	87.60	hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa] >TYK1936...	[more]
XP_023511743.1	1.61e-62	83.33	uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]	[more]
KAG6572129.1	1.91e-59	82.64	hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PQQ02570.1	8.11e-21	52.38	hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora]	[more]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2L8	3.89e-79	98.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1	[more]
A0A5A7SHL7	1.67e-67	87.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A314YA00	3.92e-21	52.38	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_106...	[more]
A0A314Z8S5	1.11e-20	52.38	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_200...	[more]
A0A6J5VPM4	3.24e-20	50.94	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51099 PE=4 S...	[more]

BLAST of CsGy7G001000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33148:SF4	OS02G0667300 PROTEIN	coord: 8..123
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 8..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G001000.1	CsGy7G001000.1	mRNA