CsGy7G000770 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G000770
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ubiquitin-conjugating enzyme E2 28
Location	Gy14Chr7: 847339 .. 849449 (+)
RNA-Seq Expression	CsGy7G000770
Synteny	CsGy7G000770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTTTCATGATAAAAAACACAATACCATATTCCAAATTTCTTAGCTTACTATCCTCATCGAAAGAATATATTCTGTTCCCACTTTGAGAAGTCCAAAAAAAAAAAAAAAAAATTCAATGGACGTCTTCAAGTTCTGCATCGGTTCTACCCTCTCCTTTTTTTTGGCCATTATATAGAGGATTTCCATCCCATTGCCTTGTGCAACAAACCAAGTACTATTTTTCTTGTTGATCTTGTTTCAATCTTCTCTTCTTCTTTCTAATTTTTCTTAGTAGAATCAAAAGCTTAGAGGTTGCAAAAATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTGATCAGTTGATGCAACTTTGACTCCGTTTGATGATGTTTTCTATGTCTGTAGTTCCCTTTTTCTTGTTTTCAGTTTTTGACAAATATGAGCCCTTTAATTTGGTAATACAGATTCTTTCACTTTAGATCTTGTTTTGATAACTATTTTGTTTTTTTATTTTTGAAAAAACGTACACAGGTCTTTTTTTTCTTTTTTGAGTTTAACGATGAAAATCAAACCATCTACCTTGATATAGTACTGGATGAGAGGGACCAAGAATTGATCACCCGTTTAATCTTTTCCTTCTTTAACTCTGGGGAAATCTTCTGTACAAATCAAATGTAAGTTTGTGTTATATAATGGTGCATTTCTTCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTAAGCCATGCTATGCCTTTTCACTTTCAACGCCAAAATTCTTGATGAGTTAAATTTTGATTAAGTTGAGAAATTATTGGTCTTTATTATTAGAACCCATTTAGATTCACTATCGAAAAAACAAGTATTCCAAAATGACAGTTTTATTTAAATTCTTTTGATAAAAATGTGTTTCAAAAGCTATTTTTAAATCACCAAACACATTTTCGTTTGGAAATGACTTGTTTTCAAAATTAAACACCTAAAAGAGTTAACTAATTACACTCTTAATTCCAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTAACATTATATGTCAAAAAAATTGTGAACTCTCTCTATGGTGTGTTATTTTGGGTTCATCATTCTTGGGTCGAGTCCTAGGTTTTTTAGGCCTTCCATCCTTCATCTCGAATGTTGCAGGTGGAATTCTCTAACAAATTTTTAGTTTTCAACTTCAACCCAACAAAACCATGTTTATTTTAATTAATTAATAAAAATTTGGTTTTGGTTTGTGTAGGTTTTGCTCTCAATATGCTCTCTGTTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAAAAATAAAATTTAAAGAATAAAAAAAAACACCTCAATCTTAATTATTAATAAATTAAAACACAACAAAAATCCAATTTTTCTATAAATTTATGTATTGATTTAATCCTTTTCCCTTAGTCTCTCCTCATCACTCTTCTTTTTCATTTTCACTTAGAAAAAAATGTATTGATCATTAGCCCTATACTAAAACTTGGGCTCTCTTGGCATCATATTCAAAACACCCTTTACATTTTGCTTGGAATTTGATAATAGTTATATAACAATATTTCACAAAACTTTGGAGCTTTGTATGTCTGTACTATCTCCTTATTGTTGAAATTATGCTTAAACTGATTCATAGTTCCTGATCAATCTTCAGTTCTAAGGATTCTAAATATTATTTCTACTTTCAAGTTTGCAAAATTGAAAGTGTATAACACTATATAATCAGCTCATTTTTGTTAATAGAAAATACTTTTGGTCCTAATAATTTAGTTTCTTAATTTTAATCAATGGAAAGGATTGAATTGGTC

mRNA sequence

CCTTTTCATGATAAAAAACACAATACCATATTCCAAATTTCTTAGCTTACTATCCTCATCGAAAGAATATATTCTGTTCCCACTTTGAGAAGTCCAAAAAAAAAAAAAAAAAATTCAATGGACGTCTTCAAGTTCTGCATCGGTTCTACCCTCTCCTTTTTTTTGGCCATTATATAGAGGATTTCCATCCCATTGCCTTGTGCAACAAACCAAGTACTATTTTTCTTGTTGATCTTGTTTCAATCTTCTCTTCTTCTTTCTAATTTTTCTTAGTAGAATCAAAAGCTTAGAGGTTGCAAAAATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTTTTGCTCTCAATATGCTCTCTGTTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAAAAATAAAATTTAAAGAATAAAAAAAAACACCTCAATCTTAATTATTAATAAATTAAAACACAACAAAAATCCAATTTTTCTATAAATTTATGTATTGATTTAATCCTTTTCCCTTAGTCTCTCCTCATCACTCTTCTTTTTCATTTTCACTTAGAAAAAAATGTATTGATCATTAGCCCTATACTAAAACTTGGGCTCTCTTGGCATCATATTCAAAACACCCTTTACATTTTGCTTGGAATTTGATAATAGTTATATAACAATATTTCACAAAACTTTGGAGCTTTGTATGTCTGTACTATCTCCTTATTGTTGAAATTATGCTTAAACTGATTCATAGTTCCTGATCAATCTTCAGTTCTAAGGATTCTAAATATTATTTCTACTTTCAAGTTTGCAAAATTGAAAGTGTATAACACTATATAATCAGCTCATTTTTGTTAATAGAAAATACTTTTGGTCCTAATAATTTAGTTTCTTAATTTTAATCAATGGAAAGGATTGAATTGGTC

Coding sequence (CDS)

ATGGCTTCCAAGAGAATATTGAAGGAGCTCAAAGACTTGCAGAGAGACCCACCAACTTCTTGCAGTGCAGGTCCTGTTGCAGAGGATATGTTCCATTGGCAAGCAACCATTATTGGTCCTAGTGATAGTCCCTATTCTGGTGGAGTTTTTCTTGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAACCTCCTAAGGTTGCTTTTAGGACAAAGGTGTTTCATCCTAACATAAACAGTAATGGCAACATATGCTTGGATATCCTCAAGGAACAATGGAGTCCTGCCCTCACAATTTCAAAGGTTTTGCTCTCAATATGCTCTCTGTTAACTGACCCAAACCCAGATGATCCATTGGTTCCTGAGATTGCTCATATGTGCAAGACTGACAAACTCAAATATGAATCCACTGCTAGGAGCTGGACCCATAAATATGCCATGGGTTAA

Protein sequence

MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMCKTDKLKYESTARSWTHKYAMG*

Homology

[Close]

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 6.4e-81
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 8.4e-81
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 2.4e-80
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPS+SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP+DSPY+GGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYE+TARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYETTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-79
Identity = 137/148 (92.57%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GP++SPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYE+TAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYEATARNWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. NCBI nr
Match: XP_004144844.1 (ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 hypothetical protein Csa_020408 [Cucumis sativus])

HSP 1 Score: 315 bits (806), Expect = 1.85e-108
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKLKYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. NCBI nr
Match: XP_008447960.1 (PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo] >KAA0049752.1 ubiquitin-conjugating enzyme E2 28 [Cucumis melo var. makuwa] >TYK12126.1 ubiquitin-conjugating enzyme E2 28 [Cucumis melo var. makuwa])

HSP 1 Score: 313 bits (803), Expect = 5.30e-108
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKL+YESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLRYESTARSWTHKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. NCBI nr
Match: XP_007201846.1 (ubiquitin-conjugating enzyme E2 28 isoform X2 [Prunus persica])

HSP 1 Score: 309 bits (792), Expect = 2.52e-106
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. NCBI nr
Match: XP_022136003.1 (ubiquitin-conjugating enzyme E2 10-like [Momordica charantia])

HSP 1 Score: 309 bits (792), Expect = 2.52e-106
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKLKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. NCBI nr
Match: XP_021603043.1 (ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG8655821.1 hypothetical protein MANES_04G076160v8 [Manihot esculenta])

HSP 1 Score: 308 bits (790), Expect = 5.10e-106
Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKIKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL
Match: A0A0A0K4N5 (Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 8.94e-109
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKLKYESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL
Match: A0A5D3CNZ1 (Ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00620 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 2.56e-108
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKL+YESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLRYESTARSWTHKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL
Match: A0A1S3BI25 (ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103490290 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 2.56e-108
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKL+YESTARSWTHKYAMG
Sbjct: 121 PEIAHMCKTDKLRYESTARSWTHKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL
Match: A0A6J1C6F1 (ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111007810 PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 1.22e-106
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDKLKYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKLKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL
Match: M5W8B0 (UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012939mg PE=3 SV=1)

HSP 1 Score: 309 bits (792), Expect = 1.22e-106
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGP+DSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPNDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 148
           PEIAHMCKTDK+KYESTARSWT KYAMG
Sbjct: 121 PEIAHMCKTDKVKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 301.2 bits (770), Expect = 4.6e-82
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 301.2 bits (770), Expect = 4.6e-82
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPN+NSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTD+ KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDRAKYESTARSWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 300.8 bits (769), Expect = 6.0e-82
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARTWTQKYAMG 148

[Close]

BLAST of CsGy7G000770 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 300.8 bits (769), Expect = 6.0e-82
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPSDSPYSGGVFLVTIHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 150

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTAR+WT KYAMG
Sbjct: 151 PEIAHMYKTDKNKYESTARTWTQKYAMG 178

[Close]

BLAST of CsGy7G000770 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 299.3 bits (765), Expect = 1.7e-81
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MASKRILKELKDLQRDPPTSCSAGPVAEDMFHWQATIIGPSDSPYSGGVFLVTIHFPPDY 60
           MASKRILKELKDLQ+DPPTSCSAGPVAEDMFHWQATI+GPS+SPY+GGVFLVTIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGNICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120
           PFKPPKVAFRTKVFHPNINSNG+ICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV 120

Query: 121 PEIAHMCKTDKLKYESTARSWTHKYAMG 149
           PEIAHM KTDK KYESTARSWT KYAMG
Sbjct: 121 PEIAHMYKTDKNKYESTARSWTQKYAMG 148

The following BLAST results are available for this feature:

BLAST of CsGy7G000770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94F47	6.4e-81	94.59	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35132	8.4e-81	95.27	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
P35133	2.4e-80	94.59	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
P35135	1.6e-79	92.57	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35131	1.6e-79	92.57	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]

BLAST of CsGy7G000770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144844.1	1.85e-108	100.00	ubiquitin-conjugating enzyme E2 28 [Cucumis sativus] >KGN43247.1 hypothetical pr...	[more]
XP_008447960.1	5.30e-108	99.32	PREDICTED: ubiquitin-conjugating enzyme E2 28 [Cucumis melo] >KAA0049752.1 ubiqu...	[more]
XP_007201846.1	2.52e-106	97.97	ubiquitin-conjugating enzyme E2 28 isoform X2 [Prunus persica]	[more]
XP_022136003.1	2.52e-106	97.97	ubiquitin-conjugating enzyme E2 10-like [Momordica charantia]	[more]
XP_021603043.1	5.10e-106	97.30	ubiquitin-conjugating enzyme E2 10-like isoform X2 [Manihot esculenta] >KAG86558...	[more]

BLAST of CsGy7G000770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4N5	8.94e-109	100.00	Ubiquitin carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G011870 PE=3 SV=1	[more]
A0A5D3CNZ1	2.56e-108	99.32	Ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BI25	2.56e-108	99.32	ubiquitin-conjugating enzyme E2 28 OS=Cucumis melo OX=3656 GN=LOC103490290 PE=3 ...	[more]
A0A6J1C6F1	1.22e-106	97.97	ubiquitin-conjugating enzyme E2 10-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
M5W8B0	1.22e-106	97.97	UBC core domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa012939m...	[more]

BLAST of CsGy7G000770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	4.6e-82	94.59	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	4.6e-82	94.59	ubiquitin-conjugating enzyme 28	[more]
AT4G27960.1	6.0e-82	95.27	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	6.0e-82	95.27	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	1.7e-81	94.59	ubiquitin-conjugating enzyme 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..147 e-value: 1.0E-76 score: 270.8
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..145
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..145
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..141 e-value: 3.8E-52 score: 175.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..147 score: 60.324039
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..142 e-value: 9.82213E-73 score: 212.448
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..148 e-value: 5.0E-73 score: 246.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..147
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G000770.2	CsGy7G000770.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity